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The map label for this gene is ytfQ [H]

Identifier: 159898642

GI number: 159898642

Start: 2663844

End: 2664845

Strand: Reverse

Name: ytfQ [H]

Synonym: Haur_2121

Alternate gene names: 159898642

Gene position: 2664845-2663844 (Counterclockwise)

Preceding gene: 159898643

Following gene: 159898641

Centisome position: 41.99

GC content: 56.19

Gene sequence:

>1002_bases
ATGAATGCCCTTGCACTCTGCCGCTGTGCTATCGCACTGGCCATAGCCTGGACTCTGGCAGCGTGCGGCGGCTCCTCGTC
TGGAGTCGGCGCAGTAGCGCCCTCCTCCCTCGATCTCAAGACCAAAACTTATCCTGAGCTGGTTGTCGGGTTTGCTCAAA
TCGGAGCCGAAAGCGAGTGGCGCACCGCTAACACCCGCTCGATTCAAGATACGGCGAATCAACTTGGTGTCGAATTGGCG
CTTTCCGATGCGCAACAGCAGCAGGAAAATCAGATCAAGGCCATCCGTTCGTTTATTGCTCAAGGTGTCGATGTCATCGG
AGTCTCGCCCGTGGTCGAGACTGGCTGGGACGAGGTTTTCGCCGAGGTCAAGCAGGCTGGAATTCCGTTGATCTTGCTCG
ATCGCAACGCCAATGTGCCAGATGATCTCTATAGTGTCCGCATCGGATCAGACTTCGTGGAAGAGGGTCGGCGGGCCTGC
GGTGAGATGGCTCGACTGCTGGATGGTCAAGGTGCGATTGTCGTCTTAGAAGGCACCCAAGGCTCAGCCCCAATGATCGG
ACGAGGTACTGGCTTTCAAGAATGCCTGCAATCTTATCCCGCGCTTCACATAATCGACAGCCAGTCCGGTGATTTCATTC
GCGCCCGTGGCAAAGAGGAGATGGCAGCGTTGCTGCAAAAACACGGCAACAGCATCGACGGCGTGTTTGCCCAGAACGAT
GACATGGCGCTTGGCGCGATCGAGGCCATCGAGGAGTATGGGCTACGGCCTGGCGTTGATATCAAAATTGTTTCGATCGA
TGCGGTACGGGCTGCCTTCGAAGCAATGATTGACGGCAAGCTTAACGCCACAATCGAGTGTAACCCGCTGCTTGGCCCGC
TGTTTTTCGCCACAGCCCTGAACTTGGCTAACGGCATACCGGTTGAAAAATGGATCAAGCCCGACGAGGGCATCTACCGA
CAGGATACCGCCGCGCAGGAATTGTCTAAGCGCGAATACTAG

Upstream 100 bases:

>100_bases
ATTACGATTGTTTGTGCCTCGACCGCCCGCTATAATGCCTATACACCGATTAGTTTACCGACCACGATTGGTCTGGAAAT
CGCCAAAGGAGGCGGCCCCA

Downstream 100 bases:

>100_bases
GCACTTTCCTCCGATTATTGAAACCCTTCACGTCTATTGAGGTCTGCATGACTGACCCGTTAGGGACGCACTGGTTGCCT
CCCGCGTATCACGCTGCGCC

Product: periplasmic binding protein/LacI transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MNALALCRCAIALAIAWTLAACGGSSSGVGAVAPSSLDLKTKTYPELVVGFAQIGAESEWRTANTRSIQDTANQLGVELA
LSDAQQQQENQIKAIRSFIAQGVDVIGVSPVVETGWDEVFAEVKQAGIPLILLDRNANVPDDLYSVRIGSDFVEEGRRAC
GEMARLLDGQGAIVVLEGTQGSAPMIGRGTGFQECLQSYPALHIIDSQSGDFIRARGKEEMAALLQKHGNSIDGVFAQND
DMALGAIEAIEEYGLRPGVDIKIVSIDAVRAAFEAMIDGKLNATIECNPLLGPLFFATALNLANGIPVEKWIKPDEGIYR
QDTAAQELSKREY

Sequences:

>Translated_333_residues
MNALALCRCAIALAIAWTLAACGGSSSGVGAVAPSSLDLKTKTYPELVVGFAQIGAESEWRTANTRSIQDTANQLGVELA
LSDAQQQQENQIKAIRSFIAQGVDVIGVSPVVETGWDEVFAEVKQAGIPLILLDRNANVPDDLYSVRIGSDFVEEGRRAC
GEMARLLDGQGAIVVLEGTQGSAPMIGRGTGFQECLQSYPALHIIDSQSGDFIRARGKEEMAALLQKHGNSIDGVFAQND
DMALGAIEAIEEYGLRPGVDIKIVSIDAVRAAFEAMIDGKLNATIECNPLLGPLFFATALNLANGIPVEKWIKPDEGIYR
QDTAAQELSKREY
>Mature_333_residues
MNALALCRCAIALAIAWTLAACGGSSSGVGAVAPSSLDLKTKTYPELVVGFAQIGAESEWRTANTRSIQDTANQLGVELA
LSDAQQQQENQIKAIRSFIAQGVDVIGVSPVVETGWDEVFAEVKQAGIPLILLDRNANVPDDLYSVRIGSDFVEEGRRAC
GEMARLLDGQGAIVVLEGTQGSAPMIGRGTGFQECLQSYPALHIIDSQSGDFIRARGKEEMAALLQKHGNSIDGVFAQND
DMALGAIEAIEEYGLRPGVDIKIVSIDAVRAAFEAMIDGKLNATIECNPLLGPLFFATALNLANGIPVEKWIKPDEGIYR
QDTAAQELSKREY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=291, Percent_Identity=44.3298969072165, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1790192, Length=225, Percent_Identity=34.6666666666667, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 35554; Mature: 35554

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALALCRCAIALAIAWTLAACGGSSSGVGAVAPSSLDLKTKTYPELVVGFAQIGAESEW
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
RTANTRSIQDTANQLGVELALSDAQQQQENQIKAIRSFIAQGVDVIGVSPVVETGWDEVF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCHHHHH
AEVKQAGIPLILLDRNANVPDDLYSVRIGSDFVEEGRRACGEMARLLDGQGAIVVLEGTQ
HHHHHCCCCEEEEECCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
GSAPMIGRGTGFQECLQSYPALHIIDSQSGDFIRARGKEEMAALLQKHGNSIDGVFAQND
CCCCCEECCCCHHHHHHHCCEEEEEECCCCCEEECCCHHHHHHHHHHCCCCCCCEEECCC
DMALGAIEAIEEYGLRPGVDIKIVSIDAVRAAFEAMIDGKLNATIECNPLLGPLFFATAL
CCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
NLANGIPVEKWIKPDEGIYRQDTAAQELSKREY
HHHCCCCHHHHCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNALALCRCAIALAIAWTLAACGGSSSGVGAVAPSSLDLKTKTYPELVVGFAQIGAESEW
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
RTANTRSIQDTANQLGVELALSDAQQQQENQIKAIRSFIAQGVDVIGVSPVVETGWDEVF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCHHHHH
AEVKQAGIPLILLDRNANVPDDLYSVRIGSDFVEEGRRACGEMARLLDGQGAIVVLEGTQ
HHHHHCCCCEEEEECCCCCCHHHHEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
GSAPMIGRGTGFQECLQSYPALHIIDSQSGDFIRARGKEEMAALLQKHGNSIDGVFAQND
CCCCCEECCCCHHHHHHHCCEEEEEECCCCCEEECCCHHHHHHHHHHCCCCCCCEEECCC
DMALGAIEAIEEYGLRPGVDIKIVSIDAVRAAFEAMIDGKLNATIECNPLLGPLFFATAL
CCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHH
NLANGIPVEKWIKPDEGIYRQDTAAQELSKREY
HHHCCCCHHHHCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 9298646 [H]