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The map label for this gene is 159898631

Identifier: 159898631

GI number: 159898631

Start: 2649748

End: 2651055

Strand: Direct

Name: 159898631

Synonym: Haur_2110

Alternate gene names: NA

Gene position: 2649748-2651055 (Clockwise)

Preceding gene: 159898630

Following gene: 159898632

Centisome position: 41.75

GC content: 49.01

Gene sequence:

>1308_bases
ATGTTTAAGCAGCGAATGATCGCCTTATTTGTGGTAGCAGGCTTGATTAGCGCTTGTGGCACTCAAACTACACCAACCAC
AAATCCAACTAGCCCTGCTGCGCCTGTTAGTAGCACACCAACTGTTGTAGCTGAAGCGAGTGCTGTGCCAGCAGCAACAA
CCCCAGCAACCAGCGCACCCAGCCCAAGTGCCTGTGTTAGCAATTACGATAGCGCAACCGATTACTTCAGCTCCAAAACT
AGCCCAAGCTATGCCAAAGAGTGGACGGTTGAGTATGCTAAGCATTACAAAGTTGTCACGGTTGATCTGGATACTGACCC
AGTTAAAACCGATTTTGATCGCTATATCTTGGTGCAGTGTGGCACACCAGCGCCCGTACTTGAAGGCGATTTAGCCAATG
CCATGGTCGTAACCATCCCAATTACCCGAGTGTGGGAAGGTGGTAGCAGCACCTTTGCCGCTATGGATGCCTTGGGCGTG
GTCGATAGCTTGAGCGGTGTGGTTGGCTCGATGACTGGGAGTGCCAACGAGTATCTGCCTTCGATTGCAGCCCAAGTTGC
CAAAGCTAGTGTGATCAAAGAAGCCAGCTATGGCGAAGATCTCGAATTAATCGCTGCTGGCAAGCCCGATATCTACCTCA
ACACCAATGGCCGCGAATGGATGACCAACGCTCGCCAAGTAGGTATTCCAGCACTACACTACTCACCATTCTCCGAATCA
CCACTTGGCTCGGCTGAGCAAGTTAAATTCTTAGCGTTGTTCTACAACCTCGAAGCCAAAGCTGACGCGATTTTTACACC
AATCGAGCGTGAATATTTGGCACTACGCGAAAAAGCTCAAGCAGCAACCAACAAACCAAGCGTGCTTATTGGCAATGTAA
CCCAAGATGGTCGCTTTGGCACACGCAACCTTGATCGGTTAGAATCAGTGTTGATGCGTGACGCAGGCGGCGAATTAGTG
TTGACTGATACCGAATTGAATCTTGGCGGCGGTAGCACTGGCTTTAGCAGCAGTATCGATCTCGAAAAAGCAATTGAAAT
TGGCGCAAATGCTGATTTCTGGTTCAACTTGGTTTATGTTCCCAGCGACAATACTGCCAGTGAATTTATTGCCACGAACC
CATTAAACGCCAGCTTTAGCGCCTTACAAAAGGGTAATAGTTTCCATCGTTTTGGCCGTGCCGAGGATTACTTTAGCAAT
GGTGCGGTCTATGTTGATCAACTGCTTGCTGATGCAGTCAGTATATTGCACCCCGAACTTTTGCCCGATCACGAATTAGT
CTTTCTCAAACGGATTCCTGGCGAGTAA

Upstream 100 bases:

>100_bases
TTAGCCCTGATTTAACTTAATGTTTTGGCAATACGTGTAGCATCATCCCCCAGCATGCTACACGTATTGCTGTTGTAGTA
TAGATTTTGCGAGGAACCCA

Downstream 100 bases:

>100_bases
TGTATGTGCTCATTCTTCCCGCCGAGCGAGGAGAAAACCCGCCATGATGAACCGAAGGGACTCTCTCTCGCCCGCCGCAG
TGGGCGAGAGGTTGGGGTGA

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MFKQRMIALFVVAGLISACGTQTTPTTNPTSPAAPVSSTPTVVAEASAVPAATTPATSAPSPSACVSNYDSATDYFSSKT
SPSYAKEWTVEYAKHYKVVTVDLDTDPVKTDFDRYILVQCGTPAPVLEGDLANAMVVTIPITRVWEGGSSTFAAMDALGV
VDSLSGVVGSMTGSANEYLPSIAAQVAKASVIKEASYGEDLELIAAGKPDIYLNTNGREWMTNARQVGIPALHYSPFSES
PLGSAEQVKFLALFYNLEAKADAIFTPIEREYLALREKAQAATNKPSVLIGNVTQDGRFGTRNLDRLESVLMRDAGGELV
LTDTELNLGGGSTGFSSSIDLEKAIEIGANADFWFNLVYVPSDNTASEFIATNPLNASFSALQKGNSFHRFGRAEDYFSN
GAVYVDQLLADAVSILHPELLPDHELVFLKRIPGE

Sequences:

>Translated_435_residues
MFKQRMIALFVVAGLISACGTQTTPTTNPTSPAAPVSSTPTVVAEASAVPAATTPATSAPSPSACVSNYDSATDYFSSKT
SPSYAKEWTVEYAKHYKVVTVDLDTDPVKTDFDRYILVQCGTPAPVLEGDLANAMVVTIPITRVWEGGSSTFAAMDALGV
VDSLSGVVGSMTGSANEYLPSIAAQVAKASVIKEASYGEDLELIAAGKPDIYLNTNGREWMTNARQVGIPALHYSPFSES
PLGSAEQVKFLALFYNLEAKADAIFTPIEREYLALREKAQAATNKPSVLIGNVTQDGRFGTRNLDRLESVLMRDAGGELV
LTDTELNLGGGSTGFSSSIDLEKAIEIGANADFWFNLVYVPSDNTASEFIATNPLNASFSALQKGNSFHRFGRAEDYFSN
GAVYVDQLLADAVSILHPELLPDHELVFLKRIPGE
>Mature_435_residues
MFKQRMIALFVVAGLISACGTQTTPTTNPTSPAAPVSSTPTVVAEASAVPAATTPATSAPSPSACVSNYDSATDYFSSKT
SPSYAKEWTVEYAKHYKVVTVDLDTDPVKTDFDRYILVQCGTPAPVLEGDLANAMVVTIPITRVWEGGSSTFAAMDALGV
VDSLSGVVGSMTGSANEYLPSIAAQVAKASVIKEASYGEDLELIAAGKPDIYLNTNGREWMTNARQVGIPALHYSPFSES
PLGSAEQVKFLALFYNLEAKADAIFTPIEREYLALREKAQAATNKPSVLIGNVTQDGRFGTRNLDRLESVLMRDAGGELV
LTDTELNLGGGSTGFSSSIDLEKAIEIGANADFWFNLVYVPSDNTASEFIATNPLNASFSALQKGNSFHRFGRAEDYFSN
GAVYVDQLLADAVSILHPELLPDHELVFLKRIPGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 46412; Mature: 46412

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKQRMIALFVVAGLISACGTQTTPTTNPTSPAAPVSSTPTVVAEASAVPAATTPATSAP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
SPSACVSNYDSATDYFSSKTSPSYAKEWTVEYAKHYKVVTVDLDTDPVKTDFDRYILVQC
CCHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEC
GTPAPVLEGDLANAMVVTIPITRVWEGGSSTFAAMDALGVVDSLSGVVGSMTGSANEYLP
CCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SIAAQVAKASVIKEASYGEDLELIAAGKPDIYLNTNGREWMTNARQVGIPALHYSPFSES
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCHHHHCCCHHCCCCEEECCCCCCC
PLGSAEQVKFLALFYNLEAKADAIFTPIEREYLALREKAQAATNKPSVLIGNVTQDGRFG
CCCCHHHHEEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
TRNLDRLESVLMRDAGGELVLTDTELNLGGGSTGFSSSIDLEKAIEIGANADFWFNLVYV
CCCHHHHHHHHHHCCCCCEEEEECEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE
PSDNTASEFIATNPLNASFSALQKGNSFHRFGRAEDYFSNGAVYVDQLLADAVSILHPEL
ECCCCHHHEEECCCCCCHHHHHHCCCCHHHCCCCHHHHCCCCHHHHHHHHHHHHHHCCCC
LPDHELVFLKRIPGE
CCCCCEEEEEECCCC
>Mature Secondary Structure
MFKQRMIALFVVAGLISACGTQTTPTTNPTSPAAPVSSTPTVVAEASAVPAATTPATSAP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
SPSACVSNYDSATDYFSSKTSPSYAKEWTVEYAKHYKVVTVDLDTDPVKTDFDRYILVQC
CCHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEC
GTPAPVLEGDLANAMVVTIPITRVWEGGSSTFAAMDALGVVDSLSGVVGSMTGSANEYLP
CCCCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SIAAQVAKASVIKEASYGEDLELIAAGKPDIYLNTNGREWMTNARQVGIPALHYSPFSES
HHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCHHHHCCCHHCCCCEEECCCCCCC
PLGSAEQVKFLALFYNLEAKADAIFTPIEREYLALREKAQAATNKPSVLIGNVTQDGRFG
CCCCHHHHEEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
TRNLDRLESVLMRDAGGELVLTDTELNLGGGSTGFSSSIDLEKAIEIGANADFWFNLVYV
CCCHHHHHHHHHHCCCCCEEEEECEEECCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEE
PSDNTASEFIATNPLNASFSALQKGNSFHRFGRAEDYFSNGAVYVDQLLADAVSILHPEL
ECCCCHHHEEECCCCCCHHHHHHCCCCHHHCCCCHHHHCCCCHHHHHHHHHHHHHHCCCC
LPDHELVFLKRIPGE
CCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]