| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898593
Identifier: 159898593
GI number: 159898593
Start: 2581193
End: 2581522
Strand: Reverse
Name: 159898593
Synonym: Haur_2072
Alternate gene names: NA
Gene position: 2581522-2581193 (Counterclockwise)
Preceding gene: 159898594
Following gene: 159898576
Centisome position: 40.68
GC content: 52.12
Gene sequence:
>330_bases ATGGACCATCAAATCCACGAACCTCATGCGCATATCCATAGTGCGCACTGCGGCCACACCCGCATCCACCATGATGATCA CATTGATTATGTCCATAATGGCCATTTACACGCCGAACATGAGGGCCACTATGATGATCACGTCATCGCGATTAGTGCCA CCAATCCCGCAGCCTGCGCTCCTGTTGCCTGTGCATGCACCCATGATGATTGTGGTCATGAGATGATTCCCCATGGCGAT CATGTTGATTATCTATATGAGGGACGGTTGCATCATCGCCACGGCGATCACTGCGATGACCATGGCCCTGTCACAGTGGT AAGCGCCTAA
Upstream 100 bases:
>100_bases TGTTACTCCTGAGGCTCATGGATAGGCCATGGTTCTTGACGTGCGCTACCAATAGTGCTAGAGTCAGTGCCATGATCATG CTTATAGGGAGGCTGTATCC
Downstream 100 bases:
>100_bases GATTGTCCACCGCTATCGCCGCTGCGTGCCCATGAACGAGCCGCAGCGGCGGCTCCTTTAAAGCATTGAAGCACGTGGGG GACGGGCAAGGATCATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MDHQIHEPHAHIHSAHCGHTRIHHDDHIDYVHNGHLHAEHEGHYDDHVIAISATNPAACAPVACACTHDDCGHEMIPHGD HVDYLYEGRLHHRHGDHCDDHGPVTVVSA
Sequences:
>Translated_109_residues MDHQIHEPHAHIHSAHCGHTRIHHDDHIDYVHNGHLHAEHEGHYDDHVIAISATNPAACAPVACACTHDDCGHEMIPHGD HVDYLYEGRLHHRHGDHCDDHGPVTVVSA >Mature_109_residues MDHQIHEPHAHIHSAHCGHTRIHHDDHIDYVHNGHLHAEHEGHYDDHVIAISATNPAACAPVACACTHDDCGHEMIPHGD HVDYLYEGRLHHRHGDHCDDHGPVTVVSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12162; Mature: 12162
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHQIHEPHAHIHSAHCGHTRIHHDDHIDYVHNGHLHAEHEGHYDDHVIAISATNPAACA CCCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCEEEEEECCCCCCCC PVACACTHDDCGHEMIPHGDHVDYLYEGRLHHRHGDHCDDHGPVTVVSA CEEEEECCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure MDHQIHEPHAHIHSAHCGHTRIHHDDHIDYVHNGHLHAEHEGHYDDHVIAISATNPAACA CCCCCCCCCCCEECCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCEEEEEECCCCCCCC PVACACTHDDCGHEMIPHGDHVDYLYEGRLHHRHGDHCDDHGPVTVVSA CEEEEECCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA