Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898559

Identifier: 159898559

GI number: 159898559

Start: 2530551

End: 2531006

Strand: Direct

Name: 159898559

Synonym: Haur_2035

Alternate gene names: NA

Gene position: 2530551-2531006 (Clockwise)

Preceding gene: 159898558

Following gene: 159898560

Centisome position: 39.87

GC content: 55.7

Gene sequence:

>456_bases
ATGAGTGTGTTGACGACCCTTGCCCCGATCCGGCGGTTGTATTTCGATACGGCTCCTTTGATTTACTATACGGAGGGGCA
TGCGCAGTATTTACCAACGCTGCGGGTCATTATGGGGCAAATTGCTCCCGATCAGATCCACGCGATCACCTCGGTGTTAA
CGCTCACCGAAACGCTGATGAAACCGCTCCAGCAGCAGCAGATGGCCCTCGTGCACCAGTATCGCCTCCTCTTTTATCAA
ACTGCGGCGCTGACGATGGTGCCGATTACGGCTCCGATTGCTGAGTTGGCGGCTACGCTCCGGGCGCAGTATGGGCTGCG
GACTCCGGATGCGTTACAACTCGCGACGGCGATTGATGCGGGCTGTGATGCCTTTTTAACCAATGATTTTGCCTTGCAGC
GGGTTACTGAGATACCGGTACTGGTGGTCGATGCCTTGGCAAACGTGGCTCCTTAA

Upstream 100 bases:

>100_bases
TGCGCTTGGCGGATATGGCAGGCTTTGCTGCATCGTTGGCCACGGGCGAGGATGCCCAAACCTATGTCGATGGGTTACGG
GATGCCTGGGAGCGACCACA

Downstream 100 bases:

>100_bases
TCGTGCTTGTTGGTTCCTGACACTGAAGAGGGGGTAGCCGTCGCGGTGCTCCCTCACACACCGATCATCCCGACCTGAAA
ATGATGCTTGACATGCACCA

Product: PilT domain-containing protein

Products: NA

Alternate protein names: PilT Protein-Like Protein; PilT Domain-Containing Protein; PilT Protein-Like; PilT Protein Domain-Containing Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSVLTTLAPIRRLYFDTAPLIYYTEGHAQYLPTLRVIMGQIAPDQIHAITSVLTLTETLMKPLQQQQMALVHQYRLLFYQ
TAALTMVPITAPIAELAATLRAQYGLRTPDALQLATAIDAGCDAFLTNDFALQRVTEIPVLVVDALANVAP

Sequences:

>Translated_151_residues
MSVLTTLAPIRRLYFDTAPLIYYTEGHAQYLPTLRVIMGQIAPDQIHAITSVLTLTETLMKPLQQQQMALVHQYRLLFYQ
TAALTMVPITAPIAELAATLRAQYGLRTPDALQLATAIDAGCDAFLTNDFALQRVTEIPVLVVDALANVAP
>Mature_150_residues
SVLTTLAPIRRLYFDTAPLIYYTEGHAQYLPTLRVIMGQIAPDQIHAITSVLTLTETLMKPLQQQQMALVHQYRLLFYQT
AALTMVPITAPIAELAATLRAQYGLRTPDALQLATAIDAGCDAFLTNDFALQRVTEIPVLVVDALANVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16611; Mature: 16480

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLTTLAPIRRLYFDTAPLIYYTEGHAQYLPTLRVIMGQIAPDQIHAITSVLTLTETLM
CCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KPLQQQQMALVHQYRLLFYQTAALTMVPITAPIAELAATLRAQYGLRTPDALQLATAIDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GCDAFLTNDFALQRVTEIPVLVVDALANVAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVLTTLAPIRRLYFDTAPLIYYTEGHAQYLPTLRVIMGQIAPDQIHAITSVLTLTETLM
CHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
KPLQQQQMALVHQYRLLFYQTAALTMVPITAPIAELAATLRAQYGLRTPDALQLATAIDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
GCDAFLTNDFALQRVTEIPVLVVDALANVAP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA