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The map label for this gene is 159898526

Identifier: 159898526

GI number: 159898526

Start: 2481338

End: 2481889

Strand: Reverse

Name: 159898526

Synonym: Haur_2002

Alternate gene names: NA

Gene position: 2481889-2481338 (Counterclockwise)

Preceding gene: 159898532

Following gene: 159898525

Centisome position: 39.11

GC content: 50.36

Gene sequence:

>552_bases
ATGACGAAGAAAAATCCCCAAGCCACCAAAGCCAAGCTTTTGCATGCACTGATTGCCGTGATTATGCGTGATGGTGCGGC
CAACGTAACCCTAGAAGCGATTGCCAAAGAAGCCAGCGTGAGCAAAGGCGGCTTGCTACATCACTTTCCAACTAAGGAGA
GCTTATTTCAGGGTTTGCTGGATCTCGCCAAACAGGCCTGGGAAACATGTTTAGCCGGAGAATTGGCCAAAGAATCGCCT
GACGTGGCAGGCTATTGGTGTCGAGCCTATGTGCATGCCAGCTTTAGCCAACCACCCAAAGATATTCAAATGCTGCACGC
GGTGCGGCGAGTGGTCGCAATCTATCCTGAGTTATTTGATTATTGGCGCGAAACCTATGTGCAAACTACCCCAGCGCCAG
CCAACGATGGCTTAACGCTTGGGCGTTCACTCACTATTCAACTAGCCTGCGATAGCCTGTGGTTCAGCGAATTAATCGGC
TTGCCAATTATTTCAGCGGCGGCCCAACAGGCGCTTTACGATGAATTATTGAGGTTAACCTATGAGCCTTGA

Upstream 100 bases:

>100_bases
AGGCTTAATCAGCTAAAATCATAGCCAGATTAATGTGCTGCTTGACAACCGTCTGTCTGGACGGTATTATACCGTCTATC
TGGACGGTTTGGAGTTTTGC

Downstream 100 bases:

>100_bases
TACGCTCAAACCCACAACGACCAACCCAATCGATAACTGGAGCCACATTGTTTGGAAACCACGCTTTTTTGCCATTTGGC
TGGGTCAAGCTAGCTCGTTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; Transcriptional Regulator TetR; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTKKNPQATKAKLLHALIAVIMRDGAANVTLEAIAKEASVSKGGLLHHFPTKESLFQGLLDLAKQAWETCLAGELAKESP
DVAGYWCRAYVHASFSQPPKDIQMLHAVRRVVAIYPELFDYWRETYVQTTPAPANDGLTLGRSLTIQLACDSLWFSELIG
LPIISAAAQQALYDELLRLTYEP

Sequences:

>Translated_183_residues
MTKKNPQATKAKLLHALIAVIMRDGAANVTLEAIAKEASVSKGGLLHHFPTKESLFQGLLDLAKQAWETCLAGELAKESP
DVAGYWCRAYVHASFSQPPKDIQMLHAVRRVVAIYPELFDYWRETYVQTTPAPANDGLTLGRSLTIQLACDSLWFSELIG
LPIISAAAQQALYDELLRLTYEP
>Mature_182_residues
TKKNPQATKAKLLHALIAVIMRDGAANVTLEAIAKEASVSKGGLLHHFPTKESLFQGLLDLAKQAWETCLAGELAKESPD
VAGYWCRAYVHASFSQPPKDIQMLHAVRRVVAIYPELFDYWRETYVQTTPAPANDGLTLGRSLTIQLACDSLWFSELIGL
PIISAAAQQALYDELLRLTYEP

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20226; Mature: 20094

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKNPQATKAKLLHALIAVIMRDGAANVTLEAIAKEASVSKGGLLHHFPTKESLFQGLL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
DLAKQAWETCLAGELAKESPDVAGYWCRAYVHASFSQPPKDIQMLHAVRRVVAIYPELFD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
YWRETYVQTTPAPANDGLTLGRSLTIQLACDSLWFSELIGLPIISAAAQQALYDELLRLT
HHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YEP
CCC
>Mature Secondary Structure 
TKKNPQATKAKLLHALIAVIMRDGAANVTLEAIAKEASVSKGGLLHHFPTKESLFQGLL
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
DLAKQAWETCLAGELAKESPDVAGYWCRAYVHASFSQPPKDIQMLHAVRRVVAIYPELFD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
YWRETYVQTTPAPANDGLTLGRSLTIQLACDSLWFSELIGLPIISAAAQQALYDELLRLT
HHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YEP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA