Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898522

Identifier: 159898522

GI number: 159898522

Start: 2466872

End: 2467435

Strand: Direct

Name: 159898522

Synonym: Haur_1998

Alternate gene names: NA

Gene position: 2466872-2467435 (Clockwise)

Preceding gene: 159898521

Following gene: 159898524

Centisome position: 38.87

GC content: 46.63

Gene sequence:

>564_bases
ATGGAAGATCAATTAATCCCATTGCTGCGGCCTATGACAATTGTGCCTGTGGCGAATTTAATCGATCAACGCAATGCTGT
TCCGGCAGAATCAGGGATATATGGCTGGTGGTTTAAAACGCTTCCACCGCAAGTTCCTAGTGCAGGCTGTTTACAGGTTG
ATGATTGGACTTTGCTGCACATCGGAATTTCTCCCTCTGGGCATAATCCAAAAACGACCCGCCATTTGCGCCATCGTTTG
AATGACCATTTGTCTGGTGGTGCTAATCGTTCGACCTTGCGGATGAGTTTAGGCTGTTTGTTGAGCGAGCAACTGAATTT
ATGCCTAGCTCCCCATGGAGCGAGTAAATATTTAACGTTTGGCGCTGGTGAGCAGCGCTTATCGCATTGGCTAACGCAGC
ATACTGGTATTTCTTGGATGCTGCATTCCCAGCCTTGGGAGCTTAAACCTATAATTCTTAAGCAATATTCCCTTCCACTC
AATATCAACAATAATGATCATCCGTTTGTTGCGACGCTCAAGCGTTTGCGAGAGCAGGCAAAGCTTCAGGCTCGATTGGA
ATGA

Upstream 100 bases:

>100_bases
TTGAGCCTACGATGCAAGGCCTCTATCGCCGTACATCGGCGCTTGAGGAGTATTGATGAGGAGTGTAATAAAACACTCAG
TATTTTTTATAAGAGAAACT

Downstream 100 bases:

>100_bases
AATCTCCGTCATCAAGTATTCATAGTTTGTACTTGTTGACGGAGATTTTCGTATTGGTCTAGCTTAGAGGGTTCCAGCCC
TGAGCTAGGTAACTGATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MEDQLIPLLRPMTIVPVANLIDQRNAVPAESGIYGWWFKTLPPQVPSAGCLQVDDWTLLHIGISPSGHNPKTTRHLRHRL
NDHLSGGANRSTLRMSLGCLLSEQLNLCLAPHGASKYLTFGAGEQRLSHWLTQHTGISWMLHSQPWELKPIILKQYSLPL
NINNNDHPFVATLKRLREQAKLQARLE

Sequences:

>Translated_187_residues
MEDQLIPLLRPMTIVPVANLIDQRNAVPAESGIYGWWFKTLPPQVPSAGCLQVDDWTLLHIGISPSGHNPKTTRHLRHRL
NDHLSGGANRSTLRMSLGCLLSEQLNLCLAPHGASKYLTFGAGEQRLSHWLTQHTGISWMLHSQPWELKPIILKQYSLPL
NINNNDHPFVATLKRLREQAKLQARLE
>Mature_187_residues
MEDQLIPLLRPMTIVPVANLIDQRNAVPAESGIYGWWFKTLPPQVPSAGCLQVDDWTLLHIGISPSGHNPKTTRHLRHRL
NDHLSGGANRSTLRMSLGCLLSEQLNLCLAPHGASKYLTFGAGEQRLSHWLTQHTGISWMLHSQPWELKPIILKQYSLPL
NINNNDHPFVATLKRLREQAKLQARLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21123; Mature: 21123

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDQLIPLLRPMTIVPVANLIDQRNAVPAESGIYGWWFKTLPPQVPSAGCLQVDDWTLLH
CCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCEEEEE
IGISPSGHNPKTTRHLRHRLNDHLSGGANRSTLRMSLGCLLSEQLNLCLAPHGASKYLTF
EEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEE
GAGEQRLSHWLTQHTGISWMLHSQPWELKPIILKQYSLPLNINNNDHPFVATLKRLREQA
CCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECEEEECCCCCHHHHHHHHHHHHH
KLQARLE
HHHHCCC
>Mature Secondary Structure
MEDQLIPLLRPMTIVPVANLIDQRNAVPAESGIYGWWFKTLPPQVPSAGCLQVDDWTLLH
CCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCEEEEE
IGISPSGHNPKTTRHLRHRLNDHLSGGANRSTLRMSLGCLLSEQLNLCLAPHGASKYLTF
EEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEEE
GAGEQRLSHWLTQHTGISWMLHSQPWELKPIILKQYSLPLNINNNDHPFVATLKRLREQA
CCCHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEECEEEECCCCCHHHHHHHHHHHHH
KLQARLE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA