Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898517

Identifier: 159898517

GI number: 159898517

Start: 2459066

End: 2460895

Strand: Direct

Name: 159898517

Synonym: Haur_1993

Alternate gene names: NA

Gene position: 2459066-2460895 (Clockwise)

Preceding gene: 159898516

Following gene: 159898521

Centisome position: 38.75

GC content: 51.37

Gene sequence:

>1830_bases
ATGAGCAACGATTTGATTTTTGCTGAGCATCATTTGCCAGCCTTACCGCTTGGGAAATATAGCCTGACGGTTACCCAAAC
CCTGAGCTCAACTGGCCAATTGCCTGCTGGAGCTGAGCCAATTCGCCAAACGGACTATCGGACGACTGGCGAAATGTTGA
TTAGTGGCGAGCGTTGGAGCTTGCCCGAAACGCTGATTGGCGCGGTTTTTCCGCCAGTTGGCAGTACGGGTGATCATTCG
ACAACTTTGCCACACATTATGCTGACCCGCTCGACCTTGCCATGGGAACGCACGGCGCAGGCTAGTGGCCAGTTGCCTTG
GTTGGCGCTTTTAGTCTTCAATGAGGACGAAAAACCGACTCCCAAGGTGTTGAAACGGGCAGATTTAGCTGATCCGACAG
TGCTGTATCAGCTGCCGACCAGCGAATCGAACGAAACGGCTGCGGATTTGGTAACGGTGATTGATCTACCTTGGGCTACT
TTGCAACCCTTGTTGCCAACGCTTGCTGATTTACCGTTGCTGACCCATGTGCGGCGAGTTGACGTAAATGAACAGGCGGT
GGTTTGGGCCAACCGAATTCCCCAAGCCGATCGGATGAGCACTGTCCATTTGGTGTCGCTTGAGCAACGCTATGATCAAA
CAGGGTTTATGGCTGCTGGGGCAAGTGCTGAAACGATGGTTCGTTTGGTGAGCTTGTATAGTTGGCAGTTTGCTTGTGTG
GCTGAAGGTCAGCGGATTGAAGAATTGCTGACCCATTTGGATGTGGCAACGATTGGCTTGCCCAGCATCAACAACCCTCA
TGCTGATGCATTTTTGGCTCAGGGTGCGGTGTTGTTACCGCATCATTTGCGCAATGGCGAACAAACGGTTGCCTGGTATC
ATGGCCCGTTGCGTGCATCCCTGCAGGTGGCTGCTGCCAATTATCCCCATGCGGTCAGTGCCGATAGCTTGTTGCGGTTT
GATCAACGGGTAGGCGTGTTTGATGTTTCATATGCGGCGGCGTGGGAGTTGGGGCGATTGCTCGGCTTACAAAACCAGCA
ATTTAGCCAAGCCTTGTATGCTTGGAAAAGCCAACAAGCGAGCCAAAGTGTTTCCCGCTTACAAGCGCGTAACACCCGCT
ACGATCATCTGCCTAGCTTTGGTCGTCAGGTTCGAGCGCGTTCGTTAAGCGAGCCAATTCCGCCAGCGATTATGAATTTT
GTGCGGCGACTGAGTTTGCTCGAAGGTGTGCCATTTAGCTCATTGTTTCCTGATGAGCGCTTATTGCCACTCGAAAGCAT
TCGCTTTTTTAGCCTCGATCGGGCTTGGCTGGCAGCATTAATTGATGGGGCTTTGAGTATTGGTCGGGCTAATATCGACC
ATGGGAACGATGGCTATTTACGTTTGCAAATTGTGCAGCAGCTGAATTTACCTACCAGTATTTCTGGTTTTGCGATTCGT
TCGAGTGTAATTGCTGGCTGGTCAGCGCTAGAAATTGAAGCCAAATCGAGCGCTGGCAGCCGCTTGGAGCACTTAAACGA
AGACACAATTCGACTTGGTGAAAATATGCTGCTGTTGCTGTTTGCTGATGAGTTAGCGAGCCTCAGTATCCATCAACATG
CGCAAACTATCCACTTTGGGCTTGATCGCGATAGCAATGGTTGGCACAAAACGTTGCGCAATGGCAGTGAGATTCGGCCA
TTAGCATGGCATGATCAACAGCGCCAAATTCTGGATGTTGCCCAGCTTGCCAGCCAGATGAGCCAAACCCTCAATCAACC
AGTTCATAGTGGCAGCTTTGCACTGCAGATGATTGAAGGCGTGGCGCGGGTAACGTTTGAACGTCGCTAG

Upstream 100 bases:

>100_bases
AAGCATTGGGGCAAACCGCAATCTGCAGGATCAATCACGAATATCTTGATGGTTTGGCTGATGTACCGCAGCTTGGAAGC
TGGACAATAGGGAGTTAGCG

Downstream 100 bases:

>100_bases
CAGGTAATCATCGCTGGACTGGTCACGATCTAACAGATGATCGTGACCAGTCCATGGTCGTGGTTATGGAGTCACGACGC
GCACCCCGATATGATGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MSNDLIFAEHHLPALPLGKYSLTVTQTLSSTGQLPAGAEPIRQTDYRTTGEMLISGERWSLPETLIGAVFPPVGSTGDHS
TTLPHIMLTRSTLPWERTAQASGQLPWLALLVFNEDEKPTPKVLKRADLADPTVLYQLPTSESNETAADLVTVIDLPWAT
LQPLLPTLADLPLLTHVRRVDVNEQAVVWANRIPQADRMSTVHLVSLEQRYDQTGFMAAGASAETMVRLVSLYSWQFACV
AEGQRIEELLTHLDVATIGLPSINNPHADAFLAQGAVLLPHHLRNGEQTVAWYHGPLRASLQVAAANYPHAVSADSLLRF
DQRVGVFDVSYAAAWELGRLLGLQNQQFSQALYAWKSQQASQSVSRLQARNTRYDHLPSFGRQVRARSLSEPIPPAIMNF
VRRLSLLEGVPFSSLFPDERLLPLESIRFFSLDRAWLAALIDGALSIGRANIDHGNDGYLRLQIVQQLNLPTSISGFAIR
SSVIAGWSALEIEAKSSAGSRLEHLNEDTIRLGENMLLLLFADELASLSIHQHAQTIHFGLDRDSNGWHKTLRNGSEIRP
LAWHDQQRQILDVAQLASQMSQTLNQPVHSGSFALQMIEGVARVTFERR

Sequences:

>Translated_609_residues
MSNDLIFAEHHLPALPLGKYSLTVTQTLSSTGQLPAGAEPIRQTDYRTTGEMLISGERWSLPETLIGAVFPPVGSTGDHS
TTLPHIMLTRSTLPWERTAQASGQLPWLALLVFNEDEKPTPKVLKRADLADPTVLYQLPTSESNETAADLVTVIDLPWAT
LQPLLPTLADLPLLTHVRRVDVNEQAVVWANRIPQADRMSTVHLVSLEQRYDQTGFMAAGASAETMVRLVSLYSWQFACV
AEGQRIEELLTHLDVATIGLPSINNPHADAFLAQGAVLLPHHLRNGEQTVAWYHGPLRASLQVAAANYPHAVSADSLLRF
DQRVGVFDVSYAAAWELGRLLGLQNQQFSQALYAWKSQQASQSVSRLQARNTRYDHLPSFGRQVRARSLSEPIPPAIMNF
VRRLSLLEGVPFSSLFPDERLLPLESIRFFSLDRAWLAALIDGALSIGRANIDHGNDGYLRLQIVQQLNLPTSISGFAIR
SSVIAGWSALEIEAKSSAGSRLEHLNEDTIRLGENMLLLLFADELASLSIHQHAQTIHFGLDRDSNGWHKTLRNGSEIRP
LAWHDQQRQILDVAQLASQMSQTLNQPVHSGSFALQMIEGVARVTFERR
>Mature_608_residues
SNDLIFAEHHLPALPLGKYSLTVTQTLSSTGQLPAGAEPIRQTDYRTTGEMLISGERWSLPETLIGAVFPPVGSTGDHST
TLPHIMLTRSTLPWERTAQASGQLPWLALLVFNEDEKPTPKVLKRADLADPTVLYQLPTSESNETAADLVTVIDLPWATL
QPLLPTLADLPLLTHVRRVDVNEQAVVWANRIPQADRMSTVHLVSLEQRYDQTGFMAAGASAETMVRLVSLYSWQFACVA
EGQRIEELLTHLDVATIGLPSINNPHADAFLAQGAVLLPHHLRNGEQTVAWYHGPLRASLQVAAANYPHAVSADSLLRFD
QRVGVFDVSYAAAWELGRLLGLQNQQFSQALYAWKSQQASQSVSRLQARNTRYDHLPSFGRQVRARSLSEPIPPAIMNFV
RRLSLLEGVPFSSLFPDERLLPLESIRFFSLDRAWLAALIDGALSIGRANIDHGNDGYLRLQIVQQLNLPTSISGFAIRS
SVIAGWSALEIEAKSSAGSRLEHLNEDTIRLGENMLLLLFADELASLSIHQHAQTIHFGLDRDSNGWHKTLRNGSEIRPL
AWHDQQRQILDVAQLASQMSQTLNQPVHSGSFALQMIEGVARVTFERR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67464; Mature: 67333

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDLIFAEHHLPALPLGKYSLTVTQTLSSTGQLPAGAEPIRQTDYRTTGEMLISGERWS
CCCCCEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCHHHCCCCCCCCEEECCCCCC
LPETLIGAVFPPVGSTGDHSTTLPHIMLTRSTLPWERTAQASGQLPWLALLVFNEDEKPT
CHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCCCC
PKVLKRADLADPTVLYQLPTSESNETAADLVTVIDLPWATLQPLLPTLADLPLLTHVRRV
HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHC
DVNEQAVVWANRIPQADRMSTVHLVSLEQRYDQTGFMAAGASAETMVRLVSLYSWQFACV
CCCCCEEEEECCCCCCCCCCEEEEEEHHHHHCCCCCEECCCCHHHHHHHHHHHCCEEEEE
AEGQRIEELLTHLDVATIGLPSINNPHADAFLAQGAVLLPHHLRNGEQTVAWYHGPLRAS
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEHHHHCCCCEEEEEEECCCCCE
LQVAAANYPHAVSADSLLRFDQRVGVFDVSYAAAWELGRLLGLQNQQFSQALYAWKSQQA
EEEEECCCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SQSVSRLQARNTRYDHLPSFGRQVRARSLSEPIPPAIMNFVRRLSLLEGVPFSSLFPDER
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCC
LLPLESIRFFSLDRAWLAALIDGALSIGRANIDHGNDGYLRLQIVQQLNLPTSISGFAIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCCCCCCCHHHH
SSVIAGWSALEIEAKSSAGSRLEHLNEDTIRLGENMLLLLFADELASLSIHQHAQTIHFG
HHHHCCCEEEEEEECCCCCHHHHHCCCHHHHHCCCEEEEEEECHHHHHHHHHHHEEEEEC
LDRDSNGWHKTLRNGSEIRPLAWHDQQRQILDVAQLASQMSQTLNQPVHSGSFALQMIEG
CCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VARVTFERR
HHHHHCCCC
>Mature Secondary Structure 
SNDLIFAEHHLPALPLGKYSLTVTQTLSSTGQLPAGAEPIRQTDYRTTGEMLISGERWS
CCCCEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCHHHCCCCCCCCEEECCCCCC
LPETLIGAVFPPVGSTGDHSTTLPHIMLTRSTLPWERTAQASGQLPWLALLVFNEDEKPT
CHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCCCC
PKVLKRADLADPTVLYQLPTSESNETAADLVTVIDLPWATLQPLLPTLADLPLLTHVRRV
HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHC
DVNEQAVVWANRIPQADRMSTVHLVSLEQRYDQTGFMAAGASAETMVRLVSLYSWQFACV
CCCCCEEEEECCCCCCCCCCEEEEEEHHHHHCCCCCEECCCCHHHHHHHHHHHCCEEEEE
AEGQRIEELLTHLDVATIGLPSINNPHADAFLAQGAVLLPHHLRNGEQTVAWYHGPLRAS
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEHHHHCCCCEEEEEEECCCCCE
LQVAAANYPHAVSADSLLRFDQRVGVFDVSYAAAWELGRLLGLQNQQFSQALYAWKSQQA
EEEEECCCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SQSVSRLQARNTRYDHLPSFGRQVRARSLSEPIPPAIMNFVRRLSLLEGVPFSSLFPDER
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCC
LLPLESIRFFSLDRAWLAALIDGALSIGRANIDHGNDGYLRLQIVQQLNLPTSISGFAIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHCCCCCCCCCHHHH
SSVIAGWSALEIEAKSSAGSRLEHLNEDTIRLGENMLLLLFADELASLSIHQHAQTIHFG
HHHHCCCEEEEEEECCCCCHHHHHCCCHHHHHCCCEEEEEEECHHHHHHHHHHHEEEEEC
LDRDSNGWHKTLRNGSEIRPLAWHDQQRQILDVAQLASQMSQTLNQPVHSGSFALQMIEG
CCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VARVTFERR
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA