| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898497
Identifier: 159898497
GI number: 159898497
Start: 2421714
End: 2424518
Strand: Direct
Name: 159898497
Synonym: Haur_1973
Alternate gene names: NA
Gene position: 2421714-2424518 (Clockwise)
Preceding gene: 159898496
Following gene: 159898498
Centisome position: 38.16
GC content: 49.88
Gene sequence:
>2805_bases ATGACAACAATTGATGATGGGTTAATCGTTTATTTGCAATTAGATGCGTTAAGTGCGGGCCAAACCGTTTTAGATATTTC GGGCAACAACAACAATGCTATCGCCCATGGCTCACTCCAACTCGTTTCCGATGACGTGTTTGGCAGTGTACTGGATTTTG ATGGCAACGGCTATCTCGAATTGAATCCCGCTAGCATTCCGGCTGGTAATGCGATCACTGTGAGTTTTTGGGCCTGTGGG GCAGAAAATTTGCCTGGCGCAGGCGTTTCGGCGATTGCTGCCTTGACCGCTGCTGATGAGCGTTCGCTGAATGTGCATTT GCCATGGAGCGATGGCCAAGTTTATTTCGATTGTGGAGCCGAAGGTAATACTTGGGATCGTATGAACCAAGCGGCCAATG CGAGCGATTACAAAGGCAGCTGGACCTATTGGGCATTTACCAAAGATGTTGCCACCGGCACGATGCAAATTTATGCTAAT GGCACGTTGTGGGCGCAAGCCACTGGCAAAACCTTGCCGATTAAGGCTGTGAGCCAAGCCACCTTTGGTGCATATAGCCC CAATACAGCGCCTTACTACGGCAAACTTTCCAGCCTACGGATCTACAATCGCGCTTTGTCGGGCGATGAAATTCTGCAGG TGATGGCGGCTGATCCAGCGGCGGCAGCAACTTTCGATAGTTTGTATCCGGTTGGTTTTAATTTGCTTGATGATGATGGT CATGCGACGATGTACATCGACGATAATCCCCAAGGCTACAACCTCTTTTTGACCATCAGCAATAACTCGCCGCGCACAAT TAATCTGGTTGCGCCGAATGATCAAACACCCTCGGCGAGCAATCACCATTTTGTGCTGAATTTTCGGCCTGGCACACTCT CAACCGCGACGCTGAGCCAAGTTAAGCTGACCGACCAAACGTGGCAACTCAGCACAGGGCAAGCGGTTGATGGCACGACA AGTTTGTATTTGCTGAGCACTCAGGCACGGAGTTTGACCCCCAATCAAAGCCTGAATTTGGCCTTACAATCAATCAGTGC CTCGGCGAGCAGCGGCGCACGCAATACGCGAGTCGAATTAAGCTACCAGCAATTGCAATATGCCAACAGCCTCACGCCAT TAATTGGCAGCCGTTTGCAAAACATGGTGGTGTTGAATGCTCAAGGTGCACATACACCGCCGTTGCATGTAGGCTTTGTT GGGCCAAATATGGTGCTAAATAATGGCACGACGGCGAATCAACTGACCTTACATATTACCAACCTGCTTGATGATGCAGC GTTGGCGCTTAGCCCAAGCACCAGCAATAGCCCAACCACCTTCATCGTAGCCTTTGACAGCCAGGATAACCAAAATAATC GTGATTGGGCCTTGGGCACGACCAGCCAAGTTAATGCGATTGCAATCACGCTTGATAATTGGACAGGTGGCAAAGATCCT GAATCGGCAGAATGGATTTTCACCACGACCCAAACCTCGCTGGCAGCAGAAGCCTTTATTCAAATGAACCTGAGCAACAT CGTTTCATCGCTGCCAAGCGGCGCGGCCAACCTCTACTTGCTCTATGAAAATTTGCCAGGCTATCGTGATGGCTACTTTG TGGTAGCGATTGAAAAAACGCCATTGATCATTACTAGCAATCAACGAGTTGGGGTTGGCACGAATGCCCCAACGCGGCCA TTGGCGATTCGTGGCAGCGGCGCAGGCGAAGAAGCTATTAGTTTTGAAAATAGCAGTGGCACAACCAAATGGCATATTAA CCAAAAAGTTACGACCCAAGGTGGCTTCAATATTGCCGAAACAGGCGTGAAAGATGGGCGTTTATTTCTCCAAACAGGTG GTAATACTGGAATTGGTACTGTCACACCACGGACTGGTTTAGATACTGGCACTGGCGTGCTGAGTGGTGCTGCCAACGAC TATACCAAAGCCCAATTTGCCTTTACTGGCGGTGGTCGTGTAACCTGGAACGGGATTAATAATCGCTTGAAATGGAGCCA ACGCTTTATTGCGATTTCGATGGAACGATCAGTTTCGTTTGCAGGTGGCCACGTGAATGTCATTCAACCAACCAGCGATC TTCCCGCGGCCCAAGTCTATGACAACCAAGTGCGTTCGTGTACTGCCGATGGAATTGTGCTCAAGGCATGGGAAGCCTTA TATGCGGTGCACACGGTTGGGGGCAACGAAAATGCCGTCAGCTATCAGATCACCTGTTATACCACAGCCTCGTTCTTTGT GCCGAGCAATTGGCTGTTGGTGGCGGTAGTTAATGGCGATGATGGCACAGTGCGTTTGGCTAATGGGCTTGTGCTCAATC CTGGGGCTAGCTCGCTGAATGGTAGTTCAATTCCATCGGGCACAATTAATATGTGGTCGGGGGCAGATAATGCCCTACCT GGTGGTTGGCTCTTGTGTAATGGCCAAAATGGCACGCCCGATTTGCGCAATCGCTTTGTGGTTGGCGCTGGGGCTGCCTA CCCTGTTGGTACAACTGGTGGTGCGGATAGCGTGACGCTAGCGGTGAATCAGATGCCTTCCCATAACCATGCAGCCAGTA CATCAAACGATGGTCAGCATAACCATACCCTCTACTTCGATACTGGTGGTGGTGGTAACGGCCCTGGTGGCGATATGGCA AAAACCAATGATGGCTTGCAAAAAAATGTGATTGCTAATTTCAGCGTCAAAACCGATAAGGATGGTAATCACTCACATAG CGTTACGATCCAAAATAATGGTGGCAACCAAGCCCATGAAAATCGCCCGCCCTTCTACGCGCTTTGCTACATTATGAAAC AATAG
Upstream 100 bases:
>100_bases AAGTTAGCCCCAAAGCCACCTTTGAAGCACCGCAAACCTTGCACGATGGTTGGCTCAAATTAAGCCCAACCAACGAGAAT TAATAAAAGGAACGCTAACC
Downstream 100 bases:
>100_bases GAGGGCTGCATATGCCGTGGGAACTGCAAATTCATCATCTTGATATTCGCTCAGTCGGCGATGCCACTGTTATTCTGGCG CTCGATAATAATGTCGTCCA
Product: tail collar domain-containing protein
Products: NA
Alternate protein names: Phage Tail Collar Domain Family; Phage Tail Collar Domain-Containing Protein; Phage Tail Collar; Phage Tail Collar Domain Protein; Phage Tail Protein
Number of amino acids: Translated: 934; Mature: 933
Protein sequence:
>934_residues MTTIDDGLIVYLQLDALSAGQTVLDISGNNNNAIAHGSLQLVSDDVFGSVLDFDGNGYLELNPASIPAGNAITVSFWACG AENLPGAGVSAIAALTAADERSLNVHLPWSDGQVYFDCGAEGNTWDRMNQAANASDYKGSWTYWAFTKDVATGTMQIYAN GTLWAQATGKTLPIKAVSQATFGAYSPNTAPYYGKLSSLRIYNRALSGDEILQVMAADPAAAATFDSLYPVGFNLLDDDG HATMYIDDNPQGYNLFLTISNNSPRTINLVAPNDQTPSASNHHFVLNFRPGTLSTATLSQVKLTDQTWQLSTGQAVDGTT SLYLLSTQARSLTPNQSLNLALQSISASASSGARNTRVELSYQQLQYANSLTPLIGSRLQNMVVLNAQGAHTPPLHVGFV GPNMVLNNGTTANQLTLHITNLLDDAALALSPSTSNSPTTFIVAFDSQDNQNNRDWALGTTSQVNAIAITLDNWTGGKDP ESAEWIFTTTQTSLAAEAFIQMNLSNIVSSLPSGAANLYLLYENLPGYRDGYFVVAIEKTPLIITSNQRVGVGTNAPTRP LAIRGSGAGEEAISFENSSGTTKWHINQKVTTQGGFNIAETGVKDGRLFLQTGGNTGIGTVTPRTGLDTGTGVLSGAAND YTKAQFAFTGGGRVTWNGINNRLKWSQRFIAISMERSVSFAGGHVNVIQPTSDLPAAQVYDNQVRSCTADGIVLKAWEAL YAVHTVGGNENAVSYQITCYTTASFFVPSNWLLVAVVNGDDGTVRLANGLVLNPGASSLNGSSIPSGTINMWSGADNALP GGWLLCNGQNGTPDLRNRFVVGAGAAYPVGTTGGADSVTLAVNQMPSHNHAASTSNDGQHNHTLYFDTGGGGNGPGGDMA KTNDGLQKNVIANFSVKTDKDGNHSHSVTIQNNGGNQAHENRPPFYALCYIMKQ
Sequences:
>Translated_934_residues MTTIDDGLIVYLQLDALSAGQTVLDISGNNNNAIAHGSLQLVSDDVFGSVLDFDGNGYLELNPASIPAGNAITVSFWACG AENLPGAGVSAIAALTAADERSLNVHLPWSDGQVYFDCGAEGNTWDRMNQAANASDYKGSWTYWAFTKDVATGTMQIYAN GTLWAQATGKTLPIKAVSQATFGAYSPNTAPYYGKLSSLRIYNRALSGDEILQVMAADPAAAATFDSLYPVGFNLLDDDG HATMYIDDNPQGYNLFLTISNNSPRTINLVAPNDQTPSASNHHFVLNFRPGTLSTATLSQVKLTDQTWQLSTGQAVDGTT SLYLLSTQARSLTPNQSLNLALQSISASASSGARNTRVELSYQQLQYANSLTPLIGSRLQNMVVLNAQGAHTPPLHVGFV GPNMVLNNGTTANQLTLHITNLLDDAALALSPSTSNSPTTFIVAFDSQDNQNNRDWALGTTSQVNAIAITLDNWTGGKDP ESAEWIFTTTQTSLAAEAFIQMNLSNIVSSLPSGAANLYLLYENLPGYRDGYFVVAIEKTPLIITSNQRVGVGTNAPTRP LAIRGSGAGEEAISFENSSGTTKWHINQKVTTQGGFNIAETGVKDGRLFLQTGGNTGIGTVTPRTGLDTGTGVLSGAAND YTKAQFAFTGGGRVTWNGINNRLKWSQRFIAISMERSVSFAGGHVNVIQPTSDLPAAQVYDNQVRSCTADGIVLKAWEAL YAVHTVGGNENAVSYQITCYTTASFFVPSNWLLVAVVNGDDGTVRLANGLVLNPGASSLNGSSIPSGTINMWSGADNALP GGWLLCNGQNGTPDLRNRFVVGAGAAYPVGTTGGADSVTLAVNQMPSHNHAASTSNDGQHNHTLYFDTGGGGNGPGGDMA KTNDGLQKNVIANFSVKTDKDGNHSHSVTIQNNGGNQAHENRPPFYALCYIMKQ >Mature_933_residues TTIDDGLIVYLQLDALSAGQTVLDISGNNNNAIAHGSLQLVSDDVFGSVLDFDGNGYLELNPASIPAGNAITVSFWACGA ENLPGAGVSAIAALTAADERSLNVHLPWSDGQVYFDCGAEGNTWDRMNQAANASDYKGSWTYWAFTKDVATGTMQIYANG TLWAQATGKTLPIKAVSQATFGAYSPNTAPYYGKLSSLRIYNRALSGDEILQVMAADPAAAATFDSLYPVGFNLLDDDGH ATMYIDDNPQGYNLFLTISNNSPRTINLVAPNDQTPSASNHHFVLNFRPGTLSTATLSQVKLTDQTWQLSTGQAVDGTTS LYLLSTQARSLTPNQSLNLALQSISASASSGARNTRVELSYQQLQYANSLTPLIGSRLQNMVVLNAQGAHTPPLHVGFVG PNMVLNNGTTANQLTLHITNLLDDAALALSPSTSNSPTTFIVAFDSQDNQNNRDWALGTTSQVNAIAITLDNWTGGKDPE SAEWIFTTTQTSLAAEAFIQMNLSNIVSSLPSGAANLYLLYENLPGYRDGYFVVAIEKTPLIITSNQRVGVGTNAPTRPL AIRGSGAGEEAISFENSSGTTKWHINQKVTTQGGFNIAETGVKDGRLFLQTGGNTGIGTVTPRTGLDTGTGVLSGAANDY TKAQFAFTGGGRVTWNGINNRLKWSQRFIAISMERSVSFAGGHVNVIQPTSDLPAAQVYDNQVRSCTADGIVLKAWEALY AVHTVGGNENAVSYQITCYTTASFFVPSNWLLVAVVNGDDGTVRLANGLVLNPGASSLNGSSIPSGTINMWSGADNALPG GWLLCNGQNGTPDLRNRFVVGAGAAYPVGTTGGADSVTLAVNQMPSHNHAASTSNDGQHNHTLYFDTGGGGNGPGGDMAK TNDGLQKNVIANFSVKTDKDGNHSHSVTIQNNGGNQAHENRPPFYALCYIMKQ
Specific function: Unknown
COG id: COG4675
COG function: function code S; Microcystin-dependent protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98712; Mature: 98581
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIDDGLIVYLQLDALSAGQTVLDISGNNNNAIAHGSLQLVSDDVFGSVLDFDGNGYLE CCEECCCEEEEEEEECCCCCCEEEEEECCCCCEEEECEEEEEECCCCCEEEEECCCCEEE LNPASIPAGNAITVSFWACGAENLPGAGVSAIAALTAADERSLNVHLPWSDGQVYFDCGA ECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHEEEEECCCCCEEEEEECCCCEEEEEECC EGNTWDRMNQAANASDYKGSWTYWAFTKDVATGTMQIYANGTLWAQATGKTLPIKAVSQA CCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEEECCEEEEEECCCEECEEEECCC TFGAYSPNTAPYYGKLSSLRIYNRALSGDEILQVMAADPAAAATFDSLYPVGFNLLDDDG CCCCCCCCCCCCCCCCCEEEEEHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCEEEECCC HATMYIDDNPQGYNLFLTISNNSPRTINLVAPNDQTPSASNHHFVLNFRPGTLSTATLSQ CEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEE VKLTDQTWQLSTGQAVDGTTSLYLLSTQARSLTPNQSLNLALQSISASASSGARNTRVEL EEEECCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE SYQQLQYANSLTPLIGSRLQNMVVLNAQGAHTPPLHVGFVGPNMVLNNGTTANQLTLHIT EHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCEEEEEEE NLLDDAALALSPSTSNSPTTFIVAFDSQDNQNNRDWALGTTSQVNAIAITLDNWTGGKDP HHCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCC ESAEWIFTTTQTSLAAEAFIQMNLSNIVSSLPSGAANLYLLYENLPGYRDGYFVVAIEKT CCCEEEEEECCHHHHEEHHEEECHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEECC PLIITSNQRVGVGTNAPTRPLAIRGSGAGEEAISFENSSGTTKWHINQKVTTQGGFNIAE EEEEECCCEEECCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECEEEEECCCCEEEC TGVKDGRLFLQTGGNTGIGTVTPRTGLDTGTGVLSGAANDYTKAQFAFTGGGRVTWNGIN CCCCCCEEEEEECCCCCCCEECCCCCCCCCCCEEECCCCCCCEEEEEEECCCEEEECCCC NRLKWSQRFIAISMERSVSFAGGHVNVIQPTSDLPAAQVYDNQVRSCTADGIVLKAWEAL CCEEECEEEEEEEEECCEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEHEEE YAVHTVGGNENAVSYQITCYTTASFFVPSNWLLVAVVNGDDGTVRLANGLVLNPGASSLN EEEEEECCCCCEEEEEEEEEEEEEEEECCCEEEEEEEECCCCEEEEECCEEECCCCCCCC GSSIPSGTINMWSGADNALPGGWLLCNGQNGTPDLRNRFVVGAGAAYPVGTTGGADSVTL CCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHCEEEEECCCCCCCCCCCCCCEEEE AVNQMPSHNHAASTSNDGQHNHTLYFDTGGGGNGPGGDMAKTNDGLQKNVIANFSVKTDK EEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC DGNHSHSVTIQNNGGNQAHENRPPFYALCYIMKQ CCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure TTIDDGLIVYLQLDALSAGQTVLDISGNNNNAIAHGSLQLVSDDVFGSVLDFDGNGYLE CEECCCEEEEEEEECCCCCCEEEEEECCCCCEEEECEEEEEECCCCCEEEEECCCCEEE LNPASIPAGNAITVSFWACGAENLPGAGVSAIAALTAADERSLNVHLPWSDGQVYFDCGA ECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHEEEEECCCCCEEEEEECCCCEEEEEECC EGNTWDRMNQAANASDYKGSWTYWAFTKDVATGTMQIYANGTLWAQATGKTLPIKAVSQA CCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEEECCEEEEEECCCEECEEEECCC TFGAYSPNTAPYYGKLSSLRIYNRALSGDEILQVMAADPAAAATFDSLYPVGFNLLDDDG CCCCCCCCCCCCCCCCCEEEEEHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCEEEECCC HATMYIDDNPQGYNLFLTISNNSPRTINLVAPNDQTPSASNHHFVLNFRPGTLSTATLSQ CEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEE VKLTDQTWQLSTGQAVDGTTSLYLLSTQARSLTPNQSLNLALQSISASASSGARNTRVEL EEEECCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEE SYQQLQYANSLTPLIGSRLQNMVVLNAQGAHTPPLHVGFVGPNMVLNNGTTANQLTLHIT EHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCEEEEEEE NLLDDAALALSPSTSNSPTTFIVAFDSQDNQNNRDWALGTTSQVNAIAITLDNWTGGKDP HHCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCC ESAEWIFTTTQTSLAAEAFIQMNLSNIVSSLPSGAANLYLLYENLPGYRDGYFVVAIEKT CCCEEEEEECCHHHHEEHHEEECHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEECC PLIITSNQRVGVGTNAPTRPLAIRGSGAGEEAISFENSSGTTKWHINQKVTTQGGFNIAE EEEEECCCEEECCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECEEEEECCCCEEEC TGVKDGRLFLQTGGNTGIGTVTPRTGLDTGTGVLSGAANDYTKAQFAFTGGGRVTWNGIN CCCCCCEEEEEECCCCCCCEECCCCCCCCCCCEEECCCCCCCEEEEEEECCCEEEECCCC NRLKWSQRFIAISMERSVSFAGGHVNVIQPTSDLPAAQVYDNQVRSCTADGIVLKAWEAL CCEEECEEEEEEEEECCEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEHEEE YAVHTVGGNENAVSYQITCYTTASFFVPSNWLLVAVVNGDDGTVRLANGLVLNPGASSLN EEEEEECCCCCEEEEEEEEEEEEEEEECCCEEEEEEEECCCCEEEEECCEEECCCCCCCC GSSIPSGTINMWSGADNALPGGWLLCNGQNGTPDLRNRFVVGAGAAYPVGTTGGADSVTL CCCCCCCEEEEECCCCCCCCCCEEEECCCCCCHHHHCEEEEECCCCCCCCCCCCCCEEEE AVNQMPSHNHAASTSNDGQHNHTLYFDTGGGGNGPGGDMAKTNDGLQKNVIANFSVKTDK EEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC DGNHSHSVTIQNNGGNQAHENRPPFYALCYIMKQ CCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA