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The map label for this gene is yobV [H]

Identifier: 159898470

GI number: 159898470

Start: 2359933

End: 2360898

Strand: Direct

Name: yobV [H]

Synonym: Haur_1946

Alternate gene names: 159898470

Gene position: 2359933-2360898 (Clockwise)

Preceding gene: 159898468

Following gene: 159898472

Centisome position: 37.18

GC content: 52.59

Gene sequence:

>966_bases
ATGTATTCGCCAACTAGCCGACTGTTGGGCGTGCTCGAACTCTTACAATCACGCCAGCAAATCAGTGGAAGCGAGCTGGC
TCAGCGGCTCGAAATTCACCCGCGCACGGTTCGCCGCTATATTCAACAACTGCAAGATATGGGGATTCCGGTCGAGGCTG
AACGGGGCATCTACGGCGCTTATCGTTTAAAGCCAGGCCAGCGAGTTCCACCACTGTTATTCACCGAACAAGAAATCCTG
GCCTTGAGTTTAGGCTTATTAACGATTCGCGAATTACAGTTTCCGGTTGAGCGAGCAACCGCTGAAACGACCTTAGCCAA
GATCGAGCGTGTGCTGCCTGCTGGTTTGGTGCAGCATGCTCGCGCCCTGCAAGCAGCAATCAGTATCCAACTTGGCATCC
GTTCACCGCGAATCGAGCCAGCTTGGTTGCTGCAATTGAGTTTGGCGGTGCAATACTGCCAACAAGTTCAACTTGAATAT
TTGTCTGCTCAACAGAATATGACTGAACGCACGATCGAACCCTATGGAATTGTTTTTAACGAAGGCGCTTGGTATCTAGT
AGGCTATTGCGATTTACGCAGGGCCATGCGGGTGTTTCGCTTGGATCGCATTCAGGCGATGCGATTGTTGGATTCAAACT
TCGAGCGGCCAGCCTCAATTGATATTGTCGAAATAGTGCAGGCAGCCCTGAACGCCAGCGATCAGCCTGACGAGGTTGAG
GTGCTGCTCAAAACAACTATCGAGCATGCCCGCCACATTATTCCGCCAGCTATGGGCCGGCTTGAAGCAACGCCGCAGGG
AGTTCTGTTGCGCCGCGCCGCCGTGCATTTGGAATGGGTCGCCTTTACGTTGCTGGAGCTTGATATTCCAGTGGTGGTGC
TACAACCTGCTGCATTACGCGAGCTGCTTCAAGCGATCGCAACCAAAGCTTTGGGCATGAGTAATACTGCTGCGCCAACC
GATTAA

Upstream 100 bases:

>100_bases
GCTGGTACATGTCCCATGAGCTTGCTCCTTGAATCAGTTGCTGATGGATTGAGCATATTCTAAAATTAGGACATTATTGG
CCCTAATTTGGAGCAATGCT

Downstream 100 bases:

>100_bases
TCAGCAATTTGCTTAGCTATCTGTACCAAAAGCCACTGATGGATTGCCTCGGCCAATTCTATATTTTGCTCTAAATAGCG
TTGCAGCAAATCGCCATAGG

Product: helix-turn-helix type 11 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MYSPTSRLLGVLELLQSRQQISGSELAQRLEIHPRTVRRYIQQLQDMGIPVEAERGIYGAYRLKPGQRVPPLLFTEQEIL
ALSLGLLTIRELQFPVERATAETTLAKIERVLPAGLVQHARALQAAISIQLGIRSPRIEPAWLLQLSLAVQYCQQVQLEY
LSAQQNMTERTIEPYGIVFNEGAWYLVGYCDLRRAMRVFRLDRIQAMRLLDSNFERPASIDIVEIVQAALNASDQPDEVE
VLLKTTIEHARHIIPPAMGRLEATPQGVLLRRAAVHLEWVAFTLLELDIPVVVLQPAALRELLQAIATKALGMSNTAAPT
D

Sequences:

>Translated_321_residues
MYSPTSRLLGVLELLQSRQQISGSELAQRLEIHPRTVRRYIQQLQDMGIPVEAERGIYGAYRLKPGQRVPPLLFTEQEIL
ALSLGLLTIRELQFPVERATAETTLAKIERVLPAGLVQHARALQAAISIQLGIRSPRIEPAWLLQLSLAVQYCQQVQLEY
LSAQQNMTERTIEPYGIVFNEGAWYLVGYCDLRRAMRVFRLDRIQAMRLLDSNFERPASIDIVEIVQAALNASDQPDEVE
VLLKTTIEHARHIIPPAMGRLEATPQGVLLRRAAVHLEWVAFTLLELDIPVVVLQPAALRELLQAIATKALGMSNTAAPT
D
>Mature_321_residues
MYSPTSRLLGVLELLQSRQQISGSELAQRLEIHPRTVRRYIQQLQDMGIPVEAERGIYGAYRLKPGQRVPPLLFTEQEIL
ALSLGLLTIRELQFPVERATAETTLAKIERVLPAGLVQHARALQAAISIQLGIRSPRIEPAWLLQLSLAVQYCQQVQLEY
LSAQQNMTERTIEPYGIVFNEGAWYLVGYCDLRRAMRVFRLDRIQAMRLLDSNFERPASIDIVEIVQAALNASDQPDEVE
VLLKTTIEHARHIIPPAMGRLEATPQGVLLRRAAVHLEWVAFTLLELDIPVVVLQPAALRELLQAIATKALGMSNTAAPT
D

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36032; Mature: 36032

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSPTSRLLGVLELLQSRQQISGSELAQRLEIHPRTVRRYIQQLQDMGIPVEAERGIYGA
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCEEE
YRLKPGQRVPPLLFTEQEILALSLGLLTIRELQFPVERATAETTLAKIERVLPAGLVQHA
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RALQAAISIQLGIRSPRIEPAWLLQLSLAVQYCQQVQLEYLSAQQNMTERTIEPYGIVFN
HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
EGAWYLVGYCDLRRAMRVFRLDRIQAMRLLDSNFERPASIDIVEIVQAALNASDQPDEVE
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHH
VLLKTTIEHARHIIPPAMGRLEATPQGVLLRRAAVHLEWVAFTLLELDIPVVVLQPAALR
HHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHH
ELLQAIATKALGMSNTAAPTD
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MYSPTSRLLGVLELLQSRQQISGSELAQRLEIHPRTVRRYIQQLQDMGIPVEAERGIYGA
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCEEE
YRLKPGQRVPPLLFTEQEILALSLGLLTIRELQFPVERATAETTLAKIERVLPAGLVQHA
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RALQAAISIQLGIRSPRIEPAWLLQLSLAVQYCQQVQLEYLSAQQNMTERTIEPYGIVFN
HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
EGAWYLVGYCDLRRAMRVFRLDRIQAMRLLDSNFERPASIDIVEIVQAALNASDQPDEVE
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHH
VLLKTTIEHARHIIPPAMGRLEATPQGVLLRRAAVHLEWVAFTLLELDIPVVVLQPAALR
HHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHH
ELLQAIATKALGMSNTAAPTD
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]