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The map label for this gene is 159898446

Identifier: 159898446

GI number: 159898446

Start: 2319240

End: 2320493

Strand: Direct

Name: 159898446

Synonym: Haur_1922

Alternate gene names: NA

Gene position: 2319240-2320493 (Clockwise)

Preceding gene: 159898445

Following gene: 159898451

Centisome position: 36.54

GC content: 38.52

Gene sequence:

>1254_bases
ATGATGTCCGTAAAGTTGATTACTTTCTTGGGTAATGTAAGAAAAACTGAGCAAAACCCCAAAGGCTATCAGTTGACCAA
ATATCAATTTCATGATGTTGAAGAACCTTATGAAACATGTTTTGTCGCTGATGCAATTGCAAGGAAATTTGCTGTTGATG
AGGTTCGTGTATTTGTAACGAAGGAAGCAATGGCAAACCATCTCGAAGATCTGCAACAAGCATTGCAAGATACAAATATT
CCTGTTTATCCAGTAAAGATCGAGACACCTGATGATAGCGATCGCTATATTTGGGATATTTTTAACAAAATTACCGATGA
AGAAATTATTAAAAAACATGATTCGATTGTATTTGATGTGACACTTAGCTTTCGCTCTATCCCAATTCTGGCATTTCTTT
CCAATATATATCTTCAAAAAATTCGGGAAACTGAATTAAAGGCAATTGTCTATGGAGAATTTATACCTGGAACATCACCA
ACATATATGCGAGATTTATCAGTCTTTGCTAGAATTTTGGATTGGACAACCGCCGTCAGTACGTTTCAACAAACGGGCCG
AGTGGAAAACTTAGCTGCACTTGCCAAGAATCTCGGTGGTGAGCCAGTTGAGCAATTTGCCAAGCAACTTGAAGCTTTCT
CGCAAGAGTTGCTAGCGGCACGGCCAGTTGGCACTACTTGGGCCGCCTCGAAATTGCCAGCCTTGCTTGAACAGGTCAAA
AACGATTCAAGACCTGAATCAACACCACTTGGTTTGTTGCTTGATAGTATTGCCGAAACCTATCAGCAATTTGATCTGAA
CAGAGGGCCATTAGCGACACTTGATGCTACATATGAAGAAGCTAAGGTTAAGGATATTCAATTTCTTAAAATTCAGCTTG
ACATGATTAAATGGTATATCAAAAAAGGCTTGCCCATTCAAGCAACAACTTTAGCTCGAGAATGGCTTGTCTCACTTGCA
GATTATTACCAAGATACAGCAGTTAATAGTTTTTCGTATAAAGAGCGTGATAAACTTAGCCGTTACATTAACAATTTTAT
ACCCCCTAGTAATACTCCAAAGATACCTGATATTCAGCCAAGTAGTCGTTTAAAGCAACATGCTCAAGGTATTGCAGATG
TATGGGATTCAATTCGTAATATAAGGAATGATATTGCTCATTGTGGTTATGATCGACCCAAGGCCAAAGAAGCAGCTAAG
TTACAGGCACATTTGGATTCACTTGAAGAAATGCTAGATCAACTATTACCTTAA

Upstream 100 bases:

>100_bases
CGGAAAATCAATGAAGCCAGGTTTTCCTGCCAAAGTAATTATTACTGAACATGCTGATAATAATCTTGTTAAGGCCAAAT
GGGCTAAGTAAAGGAGCTTA

Downstream 100 bases:

>100_bases
CAGGCATAATTTCAAACGGAGAAGTGTGAGGAGTTGGTTTGCCCTCATCTTGATAATCTGTGCCAATCTGTGGCTAAAAC
TGGGGGTTGGGGAATTTAAC

Product: CRISPR-associated TM1812 family protein

Products: NA

Alternate protein names: Crispr-Associated Protein Csx2 Family; CRISPR-Associated Protein With DxTHG Motif; CRISPR-Associated Protein Csx2 Family

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MMSVKLITFLGNVRKTEQNPKGYQLTKYQFHDVEEPYETCFVADAIARKFAVDEVRVFVTKEAMANHLEDLQQALQDTNI
PVYPVKIETPDDSDRYIWDIFNKITDEEIIKKHDSIVFDVTLSFRSIPILAFLSNIYLQKIRETELKAIVYGEFIPGTSP
TYMRDLSVFARILDWTTAVSTFQQTGRVENLAALAKNLGGEPVEQFAKQLEAFSQELLAARPVGTTWAASKLPALLEQVK
NDSRPESTPLGLLLDSIAETYQQFDLNRGPLATLDATYEEAKVKDIQFLKIQLDMIKWYIKKGLPIQATTLAREWLVSLA
DYYQDTAVNSFSYKERDKLSRYINNFIPPSNTPKIPDIQPSSRLKQHAQGIADVWDSIRNIRNDIAHCGYDRPKAKEAAK
LQAHLDSLEEMLDQLLP

Sequences:

>Translated_417_residues
MMSVKLITFLGNVRKTEQNPKGYQLTKYQFHDVEEPYETCFVADAIARKFAVDEVRVFVTKEAMANHLEDLQQALQDTNI
PVYPVKIETPDDSDRYIWDIFNKITDEEIIKKHDSIVFDVTLSFRSIPILAFLSNIYLQKIRETELKAIVYGEFIPGTSP
TYMRDLSVFARILDWTTAVSTFQQTGRVENLAALAKNLGGEPVEQFAKQLEAFSQELLAARPVGTTWAASKLPALLEQVK
NDSRPESTPLGLLLDSIAETYQQFDLNRGPLATLDATYEEAKVKDIQFLKIQLDMIKWYIKKGLPIQATTLAREWLVSLA
DYYQDTAVNSFSYKERDKLSRYINNFIPPSNTPKIPDIQPSSRLKQHAQGIADVWDSIRNIRNDIAHCGYDRPKAKEAAK
LQAHLDSLEEMLDQLLP
>Mature_417_residues
MMSVKLITFLGNVRKTEQNPKGYQLTKYQFHDVEEPYETCFVADAIARKFAVDEVRVFVTKEAMANHLEDLQQALQDTNI
PVYPVKIETPDDSDRYIWDIFNKITDEEIIKKHDSIVFDVTLSFRSIPILAFLSNIYLQKIRETELKAIVYGEFIPGTSP
TYMRDLSVFARILDWTTAVSTFQQTGRVENLAALAKNLGGEPVEQFAKQLEAFSQELLAARPVGTTWAASKLPALLEQVK
NDSRPESTPLGLLLDSIAETYQQFDLNRGPLATLDATYEEAKVKDIQFLKIQLDMIKWYIKKGLPIQATTLAREWLVSLA
DYYQDTAVNSFSYKERDKLSRYINNFIPPSNTPKIPDIQPSSRLKQHAQGIADVWDSIRNIRNDIAHCGYDRPKAKEAAK
LQAHLDSLEEMLDQLLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47588; Mature: 47588

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSVKLITFLGNVRKTEQNPKGYQLTKYQFHDVEEPYETCFVADAIARKFAVDEVRVFVT
CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KEAMANHLEDLQQALQDTNIPVYPVKIETPDDSDRYIWDIFNKITDEEIIKKHDSIVFDV
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCHHHHHHHCCCEEEEE
TLSFRSIPILAFLSNIYLQKIRETELKAIVYGEFIPGTSPTYMRDLSVFARILDWTTAVS
EECHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
TFQQTGRVENLAALAKNLGGEPVEQFAKQLEAFSQELLAARPVGTTWAASKLPALLEQVK
HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
NDSRPESTPLGLLLDSIAETYQQFDLNRGPLATLDATYEEAKVKDIQFLKIQLDMIKWYI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH
KKGLPIQATTLAREWLVSLADYYQDTAVNSFSYKERDKLSRYINNFIPPSNTPKIPDIQP
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SSRLKQHAQGIADVWDSIRNIRNDIAHCGYDRPKAKEAAKLQAHLDSLEEMLDQLLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMSVKLITFLGNVRKTEQNPKGYQLTKYQFHDVEEPYETCFVADAIARKFAVDEVRVFVT
CCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KEAMANHLEDLQQALQDTNIPVYPVKIETPDDSDRYIWDIFNKITDEEIIKKHDSIVFDV
HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCHHHHHHHCCCEEEEE
TLSFRSIPILAFLSNIYLQKIRETELKAIVYGEFIPGTSPTYMRDLSVFARILDWTTAVS
EECHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
TFQQTGRVENLAALAKNLGGEPVEQFAKQLEAFSQELLAARPVGTTWAASKLPALLEQVK
HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
NDSRPESTPLGLLLDSIAETYQQFDLNRGPLATLDATYEEAKVKDIQFLKIQLDMIKWYI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH
KKGLPIQATTLAREWLVSLADYYQDTAVNSFSYKERDKLSRYINNFIPPSNTPKIPDIQP
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SSRLKQHAQGIADVWDSIRNIRNDIAHCGYDRPKAKEAAKLQAHLDSLEEMLDQLLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA