Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898444

Identifier: 159898444

GI number: 159898444

Start: 2314499

End: 2316658

Strand: Direct

Name: 159898444

Synonym: Haur_1920

Alternate gene names: NA

Gene position: 2314499-2316658 (Clockwise)

Preceding gene: 159898443

Following gene: 159898445

Centisome position: 36.47

GC content: 38.89

Gene sequence:

>2160_bases
ATGAAAAAGCACATTCGTAAGATAGAAAATGATAACCGTATTGCAATTGCGCCTTACAATTTTGTGCCCCTACCGGATCG
GGTTATCACGCTTGATCCTGATAAAGATAAGATCGATCACGCTAGGTATGCTAATAATAGAAATACTGGGCAAATTGACT
GTAAACTGACAACGGAAACGGATCTCTATATTCGCAGCGGATTAACTGCCAGCGAATTTGCAGCGTCGCAACAAAATGCC
CAACCCGTAGATCCTCCCCAACGTGCTAGTTTAGAAGAATTAATCGCAGTATTACAAACCAACCCGAAAAATAAACCCCA
ATTTTTCTCCACTACCAATAGCAATCAACCTGTAATTCCGGCTAGCTCGTTGCGCGGCATGATTCGTTCCTTGGTCGAGA
TTGCTAGTTTTAGCAAAGTTGGCTGGGTGAGTGATAATCCTCAATTCTTTTTTCGAGCAGTAGCCGACAATAAGAGATCT
ATAGGGATCTATTATAAAAATAAAATTAAAAATGTTCAGGCAGGGTATGTTTGTAAAATTGGAGATAAATGGGTAATATT
CAAAGCGAAAGTTATTAATGGGAAAAATTTTTGTTGGTATAAACCTTGGAATTCCTTGAACGACGATATTATCAGAGAAA
TTGGCATATCTATGTTTAATGATAATGATTTTTCTATAGGTTATAAGCCAATATATTTTGATAATCCGAATTTTGATGAA
CACAGAAAATTTATAACAGATAGAATATCAGTAAGAAATAATTTGAATAATAAAGGATTTATAACTAATAGTGGTAATAT
GTTAGAAACAGGTGAGGAAGGAAATAGTAATAGGAAGAATTATTGTATTATTTTTGAGAAATCTCAAGAGCATAAATACA
CAATCAATGATCAAGCAATCTATGACTACTGTAATAATCTGACTGAATTTCAAAAATTATTAGGCGAAAAAGGATGTCTG
ATAAATGGTCGTCCTATTTTCTTCATTGAGCCTACTCAAGAAAAAGGGGAAGTTATTTATTTTGGGCATAGTCCTAATTT
TCGTTTGGCTTATCGTAGGGATGATCTCGATAAAGCAGTATCAGCCTTGGATTGTCTCCCTTCTGAAATCAGTAGTAACT
TAAATATACCTGATCTGGCCGAATCAATCTTTGGTTATGTGCGTCAAACCAAAACAAATGATCAGAATCGGGCTGCCGTT
AACAATAGCTTGTCTCAAGAGGGAGAAAAAAAGCAAGCCTTAGCCGGGCGGGTATTTTTTAGTAATGCCCATCTCTCGCC
TGAACAAGGTGATGTATTAAAAGAAACACACATTCCGCAGATTTTGGCTAGCCCGAAACCAACAACCTTCCAGCATTATT
TGGTTCAAATAGATCCTGCGCAAGATCAATTAGCGCATTATTCAACCAAAGGTGCTGTAATTCGTGGGCGTAAACTGTAT
TGGCATCAACAACCTTCAAATGCTTATACGACCGATATTAAACAGGTTGAAAAAGCTCAAACCCAATACACTTGCATTAC
TCCTGTAAACCCAGGCACAACTTTTGAATTCACCATTCGCTTTGAAAATTTGAGCGATGTTGAATTAGGGGCGTTGTTAT
GGGTGCTGGATCTCGCTTCATGTGCAGGAAAATATCGCTTTAAACTGGGTATGGGCAAGCCTTTAGGCCTTGGTTCAGTG
GCGATTAATTATGAGTTGCAATTGACTGACCGCAAACAGCGCTATCAGCGCTTGTTTGCTCGTGATGGCAATTGGGAGAC
GGGTTTTGAACCATCAAGCCAAGCGACCCAAACCAAGGCGATTGATGCCTTTTGTAAGTTTATTGATGATAACCTTGGTA
TGGATATTGAGGAGACCGAACAAATTCAACAACTTAGATCATTGTTAGCCTACCGTAACGGCGAAGGAATTTTATTTGCA
GGGTTTTCGAGTGGTGAAGACTCAGCCTTACGTTATATGGAGATTGAACGGAATACCAAGATGTCGTTTTTGCCAAGTCA
AGAGGATAAAAAAAATAAGGAAGCAATGATCAATGAATATGATGATCGTAGAGTTTTGCCAAAACCTTCGCAAGTTGCAC
CGCCACCTCCCCGAGAATTACCACGACCACCAATCGCAGATGATCCAATAAAGGTTACGGTGCGCCGTGTCACACGATGA

Upstream 100 bases:

>100_bases
TGGTGTTGCACCATTCAATCGAATTCGATGAACATGGAATCGCCACAATTCGCGCTAGCCGCTATGTTGATTTGCGTTGG
CAAACTCAAGGAGCTGAAGT

Downstream 100 bases:

>100_bases
CAGATCACCCGTTCAACGGGTAGGGATTGGCTCGAATATCCTTGGTTCACCAGCCTTACCTAGCGTGGAAACACAAAGGG
GACAGCAGCATGGCTGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 719; Mature: 719

Protein sequence:

>719_residues
MKKHIRKIENDNRIAIAPYNFVPLPDRVITLDPDKDKIDHARYANNRNTGQIDCKLTTETDLYIRSGLTASEFAASQQNA
QPVDPPQRASLEELIAVLQTNPKNKPQFFSTTNSNQPVIPASSLRGMIRSLVEIASFSKVGWVSDNPQFFFRAVADNKRS
IGIYYKNKIKNVQAGYVCKIGDKWVIFKAKVINGKNFCWYKPWNSLNDDIIREIGISMFNDNDFSIGYKPIYFDNPNFDE
HRKFITDRISVRNNLNNKGFITNSGNMLETGEEGNSNRKNYCIIFEKSQEHKYTINDQAIYDYCNNLTEFQKLLGEKGCL
INGRPIFFIEPTQEKGEVIYFGHSPNFRLAYRRDDLDKAVSALDCLPSEISSNLNIPDLAESIFGYVRQTKTNDQNRAAV
NNSLSQEGEKKQALAGRVFFSNAHLSPEQGDVLKETHIPQILASPKPTTFQHYLVQIDPAQDQLAHYSTKGAVIRGRKLY
WHQQPSNAYTTDIKQVEKAQTQYTCITPVNPGTTFEFTIRFENLSDVELGALLWVLDLASCAGKYRFKLGMGKPLGLGSV
AINYELQLTDRKQRYQRLFARDGNWETGFEPSSQATQTKAIDAFCKFIDDNLGMDIEETEQIQQLRSLLAYRNGEGILFA
GFSSGEDSALRYMEIERNTKMSFLPSQEDKKNKEAMINEYDDRRVLPKPSQVAPPPPRELPRPPIADDPIKVTVRRVTR

Sequences:

>Translated_719_residues
MKKHIRKIENDNRIAIAPYNFVPLPDRVITLDPDKDKIDHARYANNRNTGQIDCKLTTETDLYIRSGLTASEFAASQQNA
QPVDPPQRASLEELIAVLQTNPKNKPQFFSTTNSNQPVIPASSLRGMIRSLVEIASFSKVGWVSDNPQFFFRAVADNKRS
IGIYYKNKIKNVQAGYVCKIGDKWVIFKAKVINGKNFCWYKPWNSLNDDIIREIGISMFNDNDFSIGYKPIYFDNPNFDE
HRKFITDRISVRNNLNNKGFITNSGNMLETGEEGNSNRKNYCIIFEKSQEHKYTINDQAIYDYCNNLTEFQKLLGEKGCL
INGRPIFFIEPTQEKGEVIYFGHSPNFRLAYRRDDLDKAVSALDCLPSEISSNLNIPDLAESIFGYVRQTKTNDQNRAAV
NNSLSQEGEKKQALAGRVFFSNAHLSPEQGDVLKETHIPQILASPKPTTFQHYLVQIDPAQDQLAHYSTKGAVIRGRKLY
WHQQPSNAYTTDIKQVEKAQTQYTCITPVNPGTTFEFTIRFENLSDVELGALLWVLDLASCAGKYRFKLGMGKPLGLGSV
AINYELQLTDRKQRYQRLFARDGNWETGFEPSSQATQTKAIDAFCKFIDDNLGMDIEETEQIQQLRSLLAYRNGEGILFA
GFSSGEDSALRYMEIERNTKMSFLPSQEDKKNKEAMINEYDDRRVLPKPSQVAPPPPRELPRPPIADDPIKVTVRRVTR
>Mature_719_residues
MKKHIRKIENDNRIAIAPYNFVPLPDRVITLDPDKDKIDHARYANNRNTGQIDCKLTTETDLYIRSGLTASEFAASQQNA
QPVDPPQRASLEELIAVLQTNPKNKPQFFSTTNSNQPVIPASSLRGMIRSLVEIASFSKVGWVSDNPQFFFRAVADNKRS
IGIYYKNKIKNVQAGYVCKIGDKWVIFKAKVINGKNFCWYKPWNSLNDDIIREIGISMFNDNDFSIGYKPIYFDNPNFDE
HRKFITDRISVRNNLNNKGFITNSGNMLETGEEGNSNRKNYCIIFEKSQEHKYTINDQAIYDYCNNLTEFQKLLGEKGCL
INGRPIFFIEPTQEKGEVIYFGHSPNFRLAYRRDDLDKAVSALDCLPSEISSNLNIPDLAESIFGYVRQTKTNDQNRAAV
NNSLSQEGEKKQALAGRVFFSNAHLSPEQGDVLKETHIPQILASPKPTTFQHYLVQIDPAQDQLAHYSTKGAVIRGRKLY
WHQQPSNAYTTDIKQVEKAQTQYTCITPVNPGTTFEFTIRFENLSDVELGALLWVLDLASCAGKYRFKLGMGKPLGLGSV
AINYELQLTDRKQRYQRLFARDGNWETGFEPSSQATQTKAIDAFCKFIDDNLGMDIEETEQIQQLRSLLAYRNGEGILFA
GFSSGEDSALRYMEIERNTKMSFLPSQEDKKNKEAMINEYDDRRVLPKPSQVAPPPPRELPRPPIADDPIKVTVRRVTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81902; Mature: 81902

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHIRKIENDNRIAIAPYNFVPLPDRVITLDPDKDKIDHARYANNRNTGQIDCKLTTET
CCCHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEEECCC
DLYIRSGLTASEFAASQQNAQPVDPPQRASLEELIAVLQTNPKNKPQFFSTTNSNQPVIP
CEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
ASSLRGMIRSLVEIASFSKVGWVSDNPQFFFRAVADNKRSIGIYYKNKIKNVQAGYVCKI
HHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCEEEEEEECCCCCCCCCEEEEE
GDKWVIFKAKVINGKNFCWYKPWNSLNDDIIREIGISMFNDNDFSIGYKPIYFDNPNFDE
CCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHCCEEECCCCCCCCEEEEEECCCCHHH
HRKFITDRISVRNNLNNKGFITNSGNMLETGEEGNSNRKNYCIIFEKSQEHKYTINDQAI
HHHHHHHHHHHHCCCCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEECCHHH
YDYCNNLTEFQKLLGEKGCLINGRPIFFIEPTQEKGEVIYFGHSPNFRLAYRRDDLDKAV
HHHHCCHHHHHHHHCCCCCEECCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCHHHHH
SALDCLPSEISSNLNIPDLAESIFGYVRQTKTNDQNRAAVNNSLSQEGEKKQALAGRVFF
HHHHHCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHHHEEEEEE
SNAHLSPEQGDVLKETHIPQILASPKPTTFQHYLVQIDPAQDQLAHYSTKGAVIRGRKLY
ECCCCCCCCCCHHHHHCCCHHHCCCCCCCEEEEEEEECCCHHHHHHHCCCCCEEECCEEE
WHQQPSNAYTTDIKQVEKAQTQYTCITPVNPGTTFEFTIRFENLSDVELGALLWVLDLAS
EEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
CAGKYRFKLGMGKPLGLGSVAINYELQLTDRKQRYQRLFARDGNWETGFEPSSQATQTKA
HCCCEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
IDAFCKFIDDNLGMDIEETEQIQQLRSLLAYRNGEGILFAGFSSGEDSALRYMEIERNTK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCEEEEEEECCCCC
MSFLPSQEDKKNKEAMINEYDDRRVLPKPSQVAPPPPRELPRPPIADDPIKVTVRRVTR
EEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKKHIRKIENDNRIAIAPYNFVPLPDRVITLDPDKDKIDHARYANNRNTGQIDCKLTTET
CCCHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEEECCC
DLYIRSGLTASEFAASQQNAQPVDPPQRASLEELIAVLQTNPKNKPQFFSTTNSNQPVIP
CEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
ASSLRGMIRSLVEIASFSKVGWVSDNPQFFFRAVADNKRSIGIYYKNKIKNVQAGYVCKI
HHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCEEEEEEECCCCCCCCCEEEEE
GDKWVIFKAKVINGKNFCWYKPWNSLNDDIIREIGISMFNDNDFSIGYKPIYFDNPNFDE
CCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHCCEEECCCCCCCCEEEEEECCCCHHH
HRKFITDRISVRNNLNNKGFITNSGNMLETGEEGNSNRKNYCIIFEKSQEHKYTINDQAI
HHHHHHHHHHHHCCCCCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEECCHHH
YDYCNNLTEFQKLLGEKGCLINGRPIFFIEPTQEKGEVIYFGHSPNFRLAYRRDDLDKAV
HHHHCCHHHHHHHHCCCCCEECCCEEEEECCCCCCCCEEEEECCCCEEEEEECCCHHHHH
SALDCLPSEISSNLNIPDLAESIFGYVRQTKTNDQNRAAVNNSLSQEGEKKQALAGRVFF
HHHHHCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHHHEEEEEE
SNAHLSPEQGDVLKETHIPQILASPKPTTFQHYLVQIDPAQDQLAHYSTKGAVIRGRKLY
ECCCCCCCCCCHHHHHCCCHHHCCCCCCCEEEEEEEECCCHHHHHHHCCCCCEEECCEEE
WHQQPSNAYTTDIKQVEKAQTQYTCITPVNPGTTFEFTIRFENLSDVELGALLWVLDLAS
EEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
CAGKYRFKLGMGKPLGLGSVAINYELQLTDRKQRYQRLFARDGNWETGFEPSSQATQTKA
HCCCEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
IDAFCKFIDDNLGMDIEETEQIQQLRSLLAYRNGEGILFAGFSSGEDSALRYMEIERNTK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCEEEEEEECCCCC
MSFLPSQEDKKNKEAMINEYDDRRVLPKPSQVAPPPPRELPRPPIADDPIKVTVRRVTR
EEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA