| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898439
Identifier: 159898439
GI number: 159898439
Start: 2308474
End: 2310057
Strand: Direct
Name: 159898439
Synonym: Haur_1915
Alternate gene names: NA
Gene position: 2308474-2310057 (Clockwise)
Preceding gene: 159898438
Following gene: 159898440
Centisome position: 36.37
GC content: 42.87
Gene sequence:
>1584_bases ATGACTCCAGTTTTAGTGTTGATCGAAACCAGTGGAATTCAACAGTACATCTTTGGCAGTAACCGCCTACGTGAACAAAT TGGCGCATCACATCTCGTTGATCAAGTGACTGATACTTGGTTACAAGAATATGGTTTCTCGGAAGCTGAGCCTCTATTAC CACCAAAAGAACTTCCCGCTGCCCAAATTCTTTGGAGTGGTGGCGGTAATACGCGGCTATTATTTGCTAACAGTGAATTA GCGGTTCAATTTACCCGCACATGGAGCGAAAAACTATTGCGTGAAGCTCCCGATTTGCGCTGTTTGGTGGTACATCAAGC CTGGAATGAGAATTTAAATGAAACTCATCGGCAGGCGCTCGCACAGATGCGCCTTAAGAAGCAGACAACCCCAACCCAAA CACCCAGTCTTGGCCTTGCAGTGAATGCCTTTTGCCAATCAACCGGTATGCCCGCAACAGGTTTTAATCGAGCTACCGAT AAAGAAGCACCAGAGTTGTATCCAGTTTCGCATGCGGTTGCTGCAAAATTGGTTTCACTTAAAGATGCAAACGACAGGTT GGATGAAACATTACTTAGTGCTGAGCAAGCTAAAAAATATGTATTTCCCTACGATTTCGATAACCTTGGGCGGAGTGAAC ATGAACATAGCTATATCGCCGTGGTGCATATTGATGGCAATGGTATGGGCAAGCGCTTTGCAGCAATTCAGCAAAAATAT CGGGATGATGACCAAGGGTATTTAGAAAAAGTACGCAAATTATCTGAGCTAGTGAGATGCGCAAGCAAAAAAGCTTTACA GGAATGTGTAAGGCTTGTTATAAAACAAATTATTGATACGAAAGAGCTTAAAGCAAGCATTCTGTCTGATAAAAAGCCTC CTAAAAAAGCTTTTCGATTTCCGTCGTTAGAAAATGAGTCTGAACAGTTTTTCTATTTAAACGATACACGACAAGGAGAT CAAACATTTCTGCCGTTTCGGCCAATTATTTATGGTGGCGATGATGTGACCTTTGTGTGTGATGGACGGCTGGGAATTGC CCTCGCGATTAAGTTTCTCCAAGCGTTTAACCAAGCAAGTGCTCCCGAAAACTTGCATGGGTGTGCTGGGATCGCAATTG TTAAGGCCCACTACCCTTTTGCGCGAGCCTACGATTTAGCCGAACAGTTGTGTAGCTCGGCTAAGCAGAAAATTGGCGAC CATAAGGCCTCAGCAATCGATTGGCAAATTGCCATGACTGGAATTACTGGATCATTGGGAGAGATTCGTGAGCGTGAATA TCAAACAACTTCTGGTGCATCACTGAGTCTACGTCCAGTTTCAATTACTGAGAATGCGCCATCAGATATGGTTGATTGGA ATTCGGTAGCAGAAATTATTGATAACCTCCGATCGAGCGAATGGACTGATAAGAAAAATAAAATAATGCAACTGCGCGAA GTTCTACGCCAAGGCTCAGATAAAGTCGCTGAATTTGAAAAATTATACAAGATTGATATTAATCGAGGATGGATTGATAA CGTATGTATGTACTTTGATCCAATTGAATTACTTGATTTTTATTATCCGTTGGAGGCCCGATGA
Upstream 100 bases:
>100_bases AGTCTTTTAATAACTAGGTTTTGTTGATAGTTTTTGATATAATCTGGTTACTCATTTACTCCATTACCCTCTTTTGGAGT GTTACGGAGGATTCCCCCAT
Downstream 100 bases:
>100_bases GCAGCTACACAATCAAAATTACACTATTGAGCGATACAACTTTTGGGACTGGTGATGGCATTGTTGGTTTAATTGATCAA GAAGTTGAATATGATCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MTPVLVLIETSGIQQYIFGSNRLREQIGASHLVDQVTDTWLQEYGFSEAEPLLPPKELPAAQILWSGGGNTRLLFANSEL AVQFTRTWSEKLLREAPDLRCLVVHQAWNENLNETHRQALAQMRLKKQTTPTQTPSLGLAVNAFCQSTGMPATGFNRATD KEAPELYPVSHAVAAKLVSLKDANDRLDETLLSAEQAKKYVFPYDFDNLGRSEHEHSYIAVVHIDGNGMGKRFAAIQQKY RDDDQGYLEKVRKLSELVRCASKKALQECVRLVIKQIIDTKELKASILSDKKPPKKAFRFPSLENESEQFFYLNDTRQGD QTFLPFRPIIYGGDDVTFVCDGRLGIALAIKFLQAFNQASAPENLHGCAGIAIVKAHYPFARAYDLAEQLCSSAKQKIGD HKASAIDWQIAMTGITGSLGEIREREYQTTSGASLSLRPVSITENAPSDMVDWNSVAEIIDNLRSSEWTDKKNKIMQLRE VLRQGSDKVAEFEKLYKIDINRGWIDNVCMYFDPIELLDFYYPLEAR
Sequences:
>Translated_527_residues MTPVLVLIETSGIQQYIFGSNRLREQIGASHLVDQVTDTWLQEYGFSEAEPLLPPKELPAAQILWSGGGNTRLLFANSEL AVQFTRTWSEKLLREAPDLRCLVVHQAWNENLNETHRQALAQMRLKKQTTPTQTPSLGLAVNAFCQSTGMPATGFNRATD KEAPELYPVSHAVAAKLVSLKDANDRLDETLLSAEQAKKYVFPYDFDNLGRSEHEHSYIAVVHIDGNGMGKRFAAIQQKY RDDDQGYLEKVRKLSELVRCASKKALQECVRLVIKQIIDTKELKASILSDKKPPKKAFRFPSLENESEQFFYLNDTRQGD QTFLPFRPIIYGGDDVTFVCDGRLGIALAIKFLQAFNQASAPENLHGCAGIAIVKAHYPFARAYDLAEQLCSSAKQKIGD HKASAIDWQIAMTGITGSLGEIREREYQTTSGASLSLRPVSITENAPSDMVDWNSVAEIIDNLRSSEWTDKKNKIMQLRE VLRQGSDKVAEFEKLYKIDINRGWIDNVCMYFDPIELLDFYYPLEAR >Mature_526_residues TPVLVLIETSGIQQYIFGSNRLREQIGASHLVDQVTDTWLQEYGFSEAEPLLPPKELPAAQILWSGGGNTRLLFANSELA VQFTRTWSEKLLREAPDLRCLVVHQAWNENLNETHRQALAQMRLKKQTTPTQTPSLGLAVNAFCQSTGMPATGFNRATDK EAPELYPVSHAVAAKLVSLKDANDRLDETLLSAEQAKKYVFPYDFDNLGRSEHEHSYIAVVHIDGNGMGKRFAAIQQKYR DDDQGYLEKVRKLSELVRCASKKALQECVRLVIKQIIDTKELKASILSDKKPPKKAFRFPSLENESEQFFYLNDTRQGDQ TFLPFRPIIYGGDDVTFVCDGRLGIALAIKFLQAFNQASAPENLHGCAGIAIVKAHYPFARAYDLAEQLCSSAKQKIGDH KASAIDWQIAMTGITGSLGEIREREYQTTSGASLSLRPVSITENAPSDMVDWNSVAEIIDNLRSSEWTDKKNKIMQLREV LRQGSDKVAEFEKLYKIDINRGWIDNVCMYFDPIELLDFYYPLEAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59410; Mature: 59279
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVLVLIETSGIQQYIFGSNRLREQIGASHLVDQVTDTWLQEYGFSEAEPLLPPKELPA CCCEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AQILWSGGGNTRLLFANSELAVQFTRTWSEKLLREAPDLRCLVVHQAWNENLNETHRQAL EEEEECCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHH AQMRLKKQTTPTQTPSLGLAVNAFCQSTGMPATGFNRATDKEAPELYPVSHAVAAKLVSL HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH KDANDRLDETLLSAEQAKKYVFPYDFDNLGRSEHEHSYIAVVHIDGNGMGKRFAAIQQKY CCCHHHHHHHHHHHHHHHCEECCCCHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH RDDDQGYLEKVRKLSELVRCASKKALQECVRLVIKQIIDTKELKASILSDKKPPKKAFRF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHCC PSLENESEQFFYLNDTRQGDQTFLPFRPIIYGGDDVTFVCDGRLGIALAIKFLQAFNQAS CCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCC APENLHGCAGIAIVKAHYPFARAYDLAEQLCSSAKQKIGDHKASAIDWQIAMTGITGSLG CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHH EIREREYQTTSGASLSLRPVSITENAPSDMVDWNSVAEIIDNLRSSEWTDKKNKIMQLRE HHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VLRQGSDKVAEFEKLYKIDINRGWIDNVCMYFDPIELLDFYYPLEAR HHHCCCHHHHHHHHHHEEECCCCCHHHHHHHCCHHHHHHHHCCCCCC >Mature Secondary Structure TPVLVLIETSGIQQYIFGSNRLREQIGASHLVDQVTDTWLQEYGFSEAEPLLPPKELPA CCEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AQILWSGGGNTRLLFANSELAVQFTRTWSEKLLREAPDLRCLVVHQAWNENLNETHRQAL EEEEECCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHH AQMRLKKQTTPTQTPSLGLAVNAFCQSTGMPATGFNRATDKEAPELYPVSHAVAAKLVSL HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH KDANDRLDETLLSAEQAKKYVFPYDFDNLGRSEHEHSYIAVVHIDGNGMGKRFAAIQQKY CCCHHHHHHHHHHHHHHHCEECCCCHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH RDDDQGYLEKVRKLSELVRCASKKALQECVRLVIKQIIDTKELKASILSDKKPPKKAFRF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHCC PSLENESEQFFYLNDTRQGDQTFLPFRPIIYGGDDVTFVCDGRLGIALAIKFLQAFNQAS CCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHHHCC APENLHGCAGIAIVKAHYPFARAYDLAEQLCSSAKQKIGDHKASAIDWQIAMTGITGSLG CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHH EIREREYQTTSGASLSLRPVSITENAPSDMVDWNSVAEIIDNLRSSEWTDKKNKIMQLRE HHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VLRQGSDKVAEFEKLYKIDINRGWIDNVCMYFDPIELLDFYYPLEAR HHHCCCHHHHHHHHHHEEECCCCCHHHHHHHCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA