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The map label for this gene is fecI [C]

Identifier: 159898436

GI number: 159898436

Start: 2306059

End: 2306571

Strand: Direct

Name: fecI [C]

Synonym: Haur_1912

Alternate gene names: 159898436

Gene position: 2306059-2306571 (Clockwise)

Preceding gene: 159898435

Following gene: 159898437

Centisome position: 36.34

GC content: 54.0

Gene sequence:

>513_bases
ATGGTAGTTGACGCAGCGCCGCTGGCCGAGGCTGCCCTAAGGGAATGCTTAGCCGAGTGGTTTGAGAACTATCACCTCGC
GCTATTTCGGTATCTTGTGCGATTGATTGGGGATGAGGAACAAGCAGCAGATATCGTGCAAGATACGTTTGCCCGGGCGC
TTGTTGCCTTGCGTACTCAGACACTTCCGCTATACCCCTACGCATGGCTCTGTCGGATTGGCGGCAATTTGGTGATTGAT
ATGCTGCGGCGCAAGCGTCGCTGGCGTTGGCTACCCTTTCAGACAAGTACACCATCCCATGATCAAGCAATTGCAACTGC
TCATGATGTGCGTGATTGTCTTGTGCGCCTAAACCGACGTGAAGCCGAACTGCTCATCTTAGCCCACTGTGTTGGCCTTA
GCCCGAGCGAAATTGCGGCAATGCTGGATGAAAATGTCTCAACGGTGCGTGTACGCCTGCATCGTGCCCGTCATCACTTC
CGCGATCTGTATACCAAGGAGGAAGGCTCGTGA

Upstream 100 bases:

>100_bases
TCAAATACTCAATAAATATTGATTTGGGCCTTCATGAAATGATTGGGCTACCTTCTTCGTCTTTAAAGGCAGTTTTTCGA
TCTGAATGTAAGGATCATCT

Downstream 100 bases:

>100_bases
ACTGCGGTGATATTCGGCTTCAGCTAGCACAACATACAGCGTTGACACCAGCAGATGCTGTGGCAATTGAGGCGCATTTA
ACGACCTGTGATGCATGTCG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor SigE; ECF Subfamily RNA Polymerase Sigma-24 Factor; Transcriptional Regulator LuxR Family; ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase Sigma-W Factor

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MVVDAAPLAEAALRECLAEWFENYHLALFRYLVRLIGDEEQAADIVQDTFARALVALRTQTLPLYPYAWLCRIGGNLVID
MLRRKRRWRWLPFQTSTPSHDQAIATAHDVRDCLVRLNRREAELLILAHCVGLSPSEIAAMLDENVSTVRVRLHRARHHF
RDLYTKEEGS

Sequences:

>Translated_170_residues
MVVDAAPLAEAALRECLAEWFENYHLALFRYLVRLIGDEEQAADIVQDTFARALVALRTQTLPLYPYAWLCRIGGNLVID
MLRRKRRWRWLPFQTSTPSHDQAIATAHDVRDCLVRLNRREAELLILAHCVGLSPSEIAAMLDENVSTVRVRLHRARHHF
RDLYTKEEGS
>Mature_170_residues
MVVDAAPLAEAALRECLAEWFENYHLALFRYLVRLIGDEEQAADIVQDTFARALVALRTQTLPLYPYAWLCRIGGNLVID
MLRRKRRWRWLPFQTSTPSHDQAIATAHDVRDCLVRLNRREAELLILAHCVGLSPSEIAAMLDENVSTVRVRLHRARHHF
RDLYTKEEGS

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19648; Mature: 19648

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVDAAPLAEAALRECLAEWFENYHLALFRYLVRLIGDEEQAADIVQDTFARALVALRTQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
TLPLYPYAWLCRIGGNLVIDMLRRKRRWRWLPFQTSTPSHDQAIATAHDVRDCLVRLNRR
CCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
EAELLILAHCVGLSPSEIAAMLDENVSTVRVRLHRARHHFRDLYTKEEGS
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVVDAAPLAEAALRECLAEWFENYHLALFRYLVRLIGDEEQAADIVQDTFARALVALRTQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
TLPLYPYAWLCRIGGNLVIDMLRRKRRWRWLPFQTSTPSHDQAIATAHDVRDCLVRLNRR
CCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
EAELLILAHCVGLSPSEIAAMLDENVSTVRVRLHRARHHFRDLYTKEEGS
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA