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The map label for this gene is oppA [H]

Identifier: 159898421

GI number: 159898421

Start: 2288693

End: 2290765

Strand: Direct

Name: oppA [H]

Synonym: Haur_1897

Alternate gene names: 159898421

Gene position: 2288693-2290765 (Clockwise)

Preceding gene: 159898420

Following gene: 159898422

Centisome position: 36.06

GC content: 48.48

Gene sequence:

>2073_bases
ATGGTAAAGAAGCCAAAAACCCTGTGGAGCTTGATTGCGCTCCTGATTCTCGTCTTGCCACTCTTAGCAGCCTGTGGCGA
TGCCGCCTCAACTGCAACCACCGCGACCGACTCAACCCAACCAACTACTGCTAGCGATTCTTCAGCAACAACTACCGCTC
CAACCGCCGGCACTGATTCCCAGCCGACAACTGGCAGTACAGATGTTAAAGATGTGACGGTAACCTTACCATTCCAACAA
GGTGGCATTACCAGTCTTGACCATGCCTACTGGTCAGCTCAATTGTTTGTCTCACAAGGCGTTGTGTTCGAAGGCTTATA
TGGCTACGATCAACAATTGAACATCGTGCCAAAAATTGCCGAAAGCGCTACTCCTTCAGCCGACAACCTCGTTTGGACGA
TCAAACTGCGTAAAGACAAAAAATGGTCGAATGGCGACCCCGTTACCGCTAAAGATTTCTATGCTGCTTGGGTTCGAGCA
GCTGGCCCAGAATTAAAAGATGCTCCAATGTGGGCAGGCATGATGGGCTATGTCAAAAATGGTTATGCCTTCAAGGCTGG
CGCAGTTGGTGTCGATGAAGTCGGCTTCAAATTGATCGACGATTACACGATCGAAGTGACCTTGAGCCAACCAAACGCTG
CATTTATCAACTTCTTGCCAGTTATGAACGCCATGCCAATCAATGCCAAGAGCTTGGAAGCCAACCCTAGCGATTGGTTT
GACCCCAAGAATGCGGTCTATAACGGCCCATACATTGTTGAATCGTGGGTCAGCGGCGGCGATATTGTGCTCAAGCGCAA
CCCCAATTATGTTGGCGAAGGCACTGGCAACGTTGGCACGATCGTGTTGCGGCCTTACGCCGATGCTAATGCTCGCTTGC
AAGCCTTTGAAAACCAAGAAATTCAATTCACCTTCCTTGAAGATGCTAGCCAATTGGCCTACGCTCAAGGCAACCCCGAC
ATCAAAGACAACATCAAGAGCGAAGAAAACCCAATCGTTTGGAAGGGTATTCAATACAATCGTTCATTGAATGCTGGCCC
ATTGCAAGATGTGCGGGTGCGCCAAGCCTTCGCGTTGTCAATCGACAAAAAAGCTATCACCGACCAAATTTTGAAGGGCT
TGGCAGTCCCAACCGATACCTTCAACAGCGACGTACGGGTCAAGGATAAAGTTAAGAGCTTAAGCTATGATGTCGCTAAA
GCCAAGCAATTGCTGGCCGAAGCTGGCTATCCCGATGGTGCTGGCTTCCCTGAATTGACCTTCTACGCGCCACCATCAAA
CGACCCACAAATGCCTTGGATTGAAGCCGTCGCCAAGATGTGGCAAGATAATTTGGGCGTGAAGGTTGTGATTCAAAACA
ACGAAGGTCCAGTTTACTCAAACATCCAATGGTCGAACTATAACAAAGATATTCAACCAGGCTTTGCGACCCTTGGCGGC
CCAATGAACTGGTTCCAACCACTCGACTTGACCTTGGCTACCAACCATATTTGGTACTTCATGGACTTCAAAGAAGGTGG
GATGGCTAAGTTCGCTGAATACCAAACCCAAATCGATGCTGTCAGCAGCACCGAAGCCGTTGGCGATTGGGCTGATTTGA
CCGCTCGTGCTGAAGCTGCTTGGACTAAGCGCCAAGCTATCAGTAAAATTGAAGAGCCAGAAATGGCTAAAATTTCAGCT
AAAGCTCCTGAAGCTCCCAGCTTCAAAGATCAATGGGATGCAATCAACGAACGCTTTACTGCTGCTAAAGATGATGCTGA
AAAGCTGACTGCCTACAAAGATGGCTTGTTGTTGGTCTTGAAGGAAGAACAAGACGCAACGTGGTATGATTATCGTACCG
AAGAAAACAAACAAGCCCAACGCTTGATGATCAAACTGGCTGGCCAAACGCTCGATGACGCTTGGCAAACCTTGCCCGAA
ATTCAACAATTGGCAATCGACTCAGCTTGGATGATCCCCATCTACTACGACAAGTTGTACTACGCAACCGATCCACGACT
CTCAGGCATTGTGATCAACAAACTCTCGTGGGGCGGGATCTTCCAATATCAATATTTACAGTGGACTGAATAA

Upstream 100 bases:

>100_bases
CTAGCTAAGGAGGCTCATCGACGATCAAATCGTAACCCAAACGCTTGACATTGTAGTACGTCGTTTTGGATTCAATTTGC
TCAAAGAAGAGGAAATTCCC

Downstream 100 bases:

>100_bases
GTTTGGCCAGACTGGCGGGTGTTGATCAACGCCCGCCAGTTGCCCCACTGCACGCATTCTGACTGACATACGGCTGCACG
CTTTGATCGCCGGCTCTGCC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 690; Mature: 690

Protein sequence:

>690_residues
MVKKPKTLWSLIALLILVLPLLAACGDAASTATTATDSTQPTTASDSSATTTAPTAGTDSQPTTGSTDVKDVTVTLPFQQ
GGITSLDHAYWSAQLFVSQGVVFEGLYGYDQQLNIVPKIAESATPSADNLVWTIKLRKDKKWSNGDPVTAKDFYAAWVRA
AGPELKDAPMWAGMMGYVKNGYAFKAGAVGVDEVGFKLIDDYTIEVTLSQPNAAFINFLPVMNAMPINAKSLEANPSDWF
DPKNAVYNGPYIVESWVSGGDIVLKRNPNYVGEGTGNVGTIVLRPYADANARLQAFENQEIQFTFLEDASQLAYAQGNPD
IKDNIKSEENPIVWKGIQYNRSLNAGPLQDVRVRQAFALSIDKKAITDQILKGLAVPTDTFNSDVRVKDKVKSLSYDVAK
AKQLLAEAGYPDGAGFPELTFYAPPSNDPQMPWIEAVAKMWQDNLGVKVVIQNNEGPVYSNIQWSNYNKDIQPGFATLGG
PMNWFQPLDLTLATNHIWYFMDFKEGGMAKFAEYQTQIDAVSSTEAVGDWADLTARAEAAWTKRQAISKIEEPEMAKISA
KAPEAPSFKDQWDAINERFTAAKDDAEKLTAYKDGLLLVLKEEQDATWYDYRTEENKQAQRLMIKLAGQTLDDAWQTLPE
IQQLAIDSAWMIPIYYDKLYYATDPRLSGIVINKLSWGGIFQYQYLQWTE

Sequences:

>Translated_690_residues
MVKKPKTLWSLIALLILVLPLLAACGDAASTATTATDSTQPTTASDSSATTTAPTAGTDSQPTTGSTDVKDVTVTLPFQQ
GGITSLDHAYWSAQLFVSQGVVFEGLYGYDQQLNIVPKIAESATPSADNLVWTIKLRKDKKWSNGDPVTAKDFYAAWVRA
AGPELKDAPMWAGMMGYVKNGYAFKAGAVGVDEVGFKLIDDYTIEVTLSQPNAAFINFLPVMNAMPINAKSLEANPSDWF
DPKNAVYNGPYIVESWVSGGDIVLKRNPNYVGEGTGNVGTIVLRPYADANARLQAFENQEIQFTFLEDASQLAYAQGNPD
IKDNIKSEENPIVWKGIQYNRSLNAGPLQDVRVRQAFALSIDKKAITDQILKGLAVPTDTFNSDVRVKDKVKSLSYDVAK
AKQLLAEAGYPDGAGFPELTFYAPPSNDPQMPWIEAVAKMWQDNLGVKVVIQNNEGPVYSNIQWSNYNKDIQPGFATLGG
PMNWFQPLDLTLATNHIWYFMDFKEGGMAKFAEYQTQIDAVSSTEAVGDWADLTARAEAAWTKRQAISKIEEPEMAKISA
KAPEAPSFKDQWDAINERFTAAKDDAEKLTAYKDGLLLVLKEEQDATWYDYRTEENKQAQRLMIKLAGQTLDDAWQTLPE
IQQLAIDSAWMIPIYYDKLYYATDPRLSGIVINKLSWGGIFQYQYLQWTE
>Mature_690_residues
MVKKPKTLWSLIALLILVLPLLAACGDAASTATTATDSTQPTTASDSSATTTAPTAGTDSQPTTGSTDVKDVTVTLPFQQ
GGITSLDHAYWSAQLFVSQGVVFEGLYGYDQQLNIVPKIAESATPSADNLVWTIKLRKDKKWSNGDPVTAKDFYAAWVRA
AGPELKDAPMWAGMMGYVKNGYAFKAGAVGVDEVGFKLIDDYTIEVTLSQPNAAFINFLPVMNAMPINAKSLEANPSDWF
DPKNAVYNGPYIVESWVSGGDIVLKRNPNYVGEGTGNVGTIVLRPYADANARLQAFENQEIQFTFLEDASQLAYAQGNPD
IKDNIKSEENPIVWKGIQYNRSLNAGPLQDVRVRQAFALSIDKKAITDQILKGLAVPTDTFNSDVRVKDKVKSLSYDVAK
AKQLLAEAGYPDGAGFPELTFYAPPSNDPQMPWIEAVAKMWQDNLGVKVVIQNNEGPVYSNIQWSNYNKDIQPGFATLGG
PMNWFQPLDLTLATNHIWYFMDFKEGGMAKFAEYQTQIDAVSSTEAVGDWADLTARAEAAWTKRQAISKIEEPEMAKISA
KAPEAPSFKDQWDAINERFTAAKDDAEKLTAYKDGLLLVLKEEQDATWYDYRTEENKQAQRLMIKLAGQTLDDAWQTLPE
IQQLAIDSAWMIPIYYDKLYYATDPRLSGIVINKLSWGGIFQYQYLQWTE

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=366, Percent_Identity=28.6885245901639, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1787495, Length=361, Percent_Identity=28.808864265928, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI1789397, Length=368, Percent_Identity=28.804347826087, Blast_Score=131, Evalue=2e-31,
Organism=Escherichia coli, GI1787052, Length=350, Percent_Identity=29.7142857142857, Blast_Score=107, Evalue=4e-24,
Organism=Escherichia coli, GI1789887, Length=352, Percent_Identity=26.7045454545455, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1789966, Length=344, Percent_Identity=25, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 76327; Mature: 76327

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKPKTLWSLIALLILVLPLLAACGDAASTATTATDSTQPTTASDSSATTTAPTAGTDS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QPTTGSTDVKDVTVTLPFQQGGITSLDHAYWSAQLFVSQGVVFEGLYGYDQQLNIVPKIA
CCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHEEEHHHCCEEEEECCCCCCCCEEHHHHH
ESATPSADNLVWTIKLRKDKKWSNGDPVTAKDFYAAWVRAAGPELKDAPMWAGMMGYVKN
HCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
GYAFKAGAVGVDEVGFKLIDDYTIEVTLSQPNAAFINFLPVMNAMPINAKSLEANPSDWF
CCEEECCCCCHHHCCEEEECCEEEEEEECCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCC
DPKNAVYNGPYIVESWVSGGDIVLKRNPNYVGEGTGNVGTIVLRPYADANARLQAFENQE
CCCCCEECCCEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCC
IQFTFLEDASQLAYAQGNPDIKDNIKSEENPIVWKGIQYNRSLNAGPLQDVRVRQAFALS
EEEEEECCCCHHEEECCCCCHHHCCCCCCCCEEEECEEECCCCCCCCCHHHHHHHHHHEE
IDKKAITDQILKGLAVPTDTFNSDVRVKDKVKSLSYDVAKAKQLLAEAGYPDGAGFPELT
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
FYAPPSNDPQMPWIEAVAKMWQDNLGVKVVIQNNEGPVYSNIQWSNYNKDIQPGFATLGG
EECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHCCC
PMNWFQPLDLTLATNHIWYFMDFKEGGMAKFAEYQTQIDAVSSTEAVGDWADLTARAEAA
CCCCCCCCEEEEEECEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHH
WTKRQAISKIEEPEMAKISAKAPEAPSFKDQWDAINERFTAAKDDAEKLTAYKDGLLLVL
HHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEE
KEEQDATWYDYRTEENKQAQRLMIKLAGQTLDDAWQTLPEIQQLAIDSAWMIPIYYDKLY
EECCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEE
YATDPRLSGIVINKLSWGGIFQYQYLQWTE
EECCCCCCCEEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MVKKPKTLWSLIALLILVLPLLAACGDAASTATTATDSTQPTTASDSSATTTAPTAGTDS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QPTTGSTDVKDVTVTLPFQQGGITSLDHAYWSAQLFVSQGVVFEGLYGYDQQLNIVPKIA
CCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHEEEHHHCCEEEEECCCCCCCCEEHHHHH
ESATPSADNLVWTIKLRKDKKWSNGDPVTAKDFYAAWVRAAGPELKDAPMWAGMMGYVKN
HCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
GYAFKAGAVGVDEVGFKLIDDYTIEVTLSQPNAAFINFLPVMNAMPINAKSLEANPSDWF
CCEEECCCCCHHHCCEEEECCEEEEEEECCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCC
DPKNAVYNGPYIVESWVSGGDIVLKRNPNYVGEGTGNVGTIVLRPYADANARLQAFENQE
CCCCCEECCCEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCC
IQFTFLEDASQLAYAQGNPDIKDNIKSEENPIVWKGIQYNRSLNAGPLQDVRVRQAFALS
EEEEEECCCCHHEEECCCCCHHHCCCCCCCCEEEECEEECCCCCCCCCHHHHHHHHHHEE
IDKKAITDQILKGLAVPTDTFNSDVRVKDKVKSLSYDVAKAKQLLAEAGYPDGAGFPELT
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
FYAPPSNDPQMPWIEAVAKMWQDNLGVKVVIQNNEGPVYSNIQWSNYNKDIQPGFATLGG
EECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHCCC
PMNWFQPLDLTLATNHIWYFMDFKEGGMAKFAEYQTQIDAVSSTEAVGDWADLTARAEAA
CCCCCCCCEEEEEECEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHH
WTKRQAISKIEEPEMAKISAKAPEAPSFKDQWDAINERFTAAKDDAEKLTAYKDGLLLVL
HHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEE
KEEQDATWYDYRTEENKQAQRLMIKLAGQTLDDAWQTLPEIQQLAIDSAWMIPIYYDKLY
EECCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEE
YATDPRLSGIVINKLSWGGIFQYQYLQWTE
EECCCCCCCEEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2821267; 3525163; 11677609; 8202710; 8747465; 10422831; 10438628 [H]