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The map label for this gene is 159898417

Identifier: 159898417

GI number: 159898417

Start: 2282504

End: 2282899

Strand: Reverse

Name: 159898417

Synonym: Haur_1893

Alternate gene names: NA

Gene position: 2282899-2282504 (Counterclockwise)

Preceding gene: 159898418

Following gene: 159898415

Centisome position: 35.97

GC content: 52.02

Gene sequence:

>396_bases
ATGCTGCTCGTTGCTAGCTACCTTGCCCCAAGCACCATTCATGGCATCGGTGTGTTTGCAGCCAATTTTATTCCGGCCAA
CACCATTATTTGGGAGTTTACTGCGGCGGTCGATTGGCGCATGACCGCCGACGAGGTTGCGGCGTTCCCCGAACCCTACC
GCAGTGCCTTCACCGCCTATATCTATGTTGATGACGAGGGATATTATGTCTTGTGCGGCGATAATGCCCGCTATTTCAAT
CATTCGCCAACGCCCAATTGCGATGATGCCGGAGCGTACACCCGCACCTTACGCGATATCCAAGCAGGCGAGGAATTGAC
CTGCGATTATTTTGTATTCGATCAAATTACCCGCCAGCACGGGCTTGATGTCACGAGTTTTGTACGGGTTGATTAA

Upstream 100 bases:

>100_bases
CAGCGAAAAAGATTTACAAAGTGTGGTGTATGGCCTCGTTCGCCATGCCTAAAATCTGCTATGATCAAATCAATTCGGCT
CAGCTCATAAAGGAACATCT

Downstream 100 bases:

>100_bases
TGTAACAAGCTGCCTGCGCTACTCAGGCAGCTCTCATTTAACTTCCCGCTAAACCACGCCGCATACCTACCAAATAGATC
CCAAAGAGAATCACCATCAC

Product: nuclear protein SET

Products: NA

Alternate protein names: SET Domain-Containing Protein

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MLLVASYLAPSTIHGIGVFAANFIPANTIIWEFTAAVDWRMTADEVAAFPEPYRSAFTAYIYVDDEGYYVLCGDNARYFN
HSPTPNCDDAGAYTRTLRDIQAGEELTCDYFVFDQITRQHGLDVTSFVRVD

Sequences:

>Translated_131_residues
MLLVASYLAPSTIHGIGVFAANFIPANTIIWEFTAAVDWRMTADEVAAFPEPYRSAFTAYIYVDDEGYYVLCGDNARYFN
HSPTPNCDDAGAYTRTLRDIQAGEELTCDYFVFDQITRQHGLDVTSFVRVD
>Mature_131_residues
MLLVASYLAPSTIHGIGVFAANFIPANTIIWEFTAAVDWRMTADEVAAFPEPYRSAFTAYIYVDDEGYYVLCGDNARYFN
HSPTPNCDDAGAYTRTLRDIQAGEELTCDYFVFDQITRQHGLDVTSFVRVD

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14726; Mature: 14726

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVASYLAPSTIHGIGVFAANFIPANTIIWEFTAAVDWRMTADEVAAFPEPYRSAFTAY
CEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECHHHHHCCCCCCCCEEEEE
IYVDDEGYYVLCGDNARYFNHSPTPNCDDAGAYTRTLRDIQAGEELTCDYFVFDQITRQH
EEECCCCEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
GLDVTSFVRVD
CCCCCEEEEEC
>Mature Secondary Structure
MLLVASYLAPSTIHGIGVFAANFIPANTIIWEFTAAVDWRMTADEVAAFPEPYRSAFTAY
CEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECHHHHHCCCCCCCCEEEEE
IYVDDEGYYVLCGDNARYFNHSPTPNCDDAGAYTRTLRDIQAGEELTCDYFVFDQITRQH
EEECCCCEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
GLDVTSFVRVD
CCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA