The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898404

Identifier: 159898404

GI number: 159898404

Start: 2246767

End: 2248077

Strand: Direct

Name: 159898404

Synonym: Haur_1880

Alternate gene names: NA

Gene position: 2246767-2248077 (Clockwise)

Preceding gene: 159898403

Following gene: 159898405

Centisome position: 35.4

GC content: 48.36

Gene sequence:

>1311_bases
ATGATTCACAATCAAGAATTTATCATTCGTAAATCTGATATTGCTAATCCACAAAGTCTGCCTGAATTGATCGAAACGCT
GGTGAGTGGCGATGTATTACGTTGGTATGTTTCTAAAGTAACGGCTGATGAGCTGGTGGTCGAGGCCACGCTTTATAGCG
AACATCTGGCCGACCCGCCCGAGAGTGTGCTTGGGCAGTTTTACCCTGGCAAGAGCGCTGTGTTGAACATTGTGCCAACC
GGAGTTGGTTGTGATATTGGCGGGTATGCTGGCGATGCTGGCCCCGCCACAGCCCTGTTGGCCAGTTGCTGCGATTATTT
AGTGACAAATCCCAATGCAGTTAATGCTTCAAATTTTATCTTGATGGATAAAAATTTAGTGTATACCGAAGGCTACTGCA
TTGATCTCTTCTCGCGTGGTTTGATTAACCTGCACCTGCCATATAGCAATAAAATTGGCTTGATTATCGAAAAAACCGAT
GCTGAGCACTTGGATGTGGTGTTTAATATTCTCAATACCGTTCGCGCAGTTTATGGGGTGAATATTGAAGAGTTTGTGAT
CACCGATGAGGCGATCGGTGGGCGTTGTATTCAGCATAGTTCTGGCAGCTATGTTGGCAGTATCGACAATCCGGCGACCT
TATTCCGTGCTTGCGAGCAATTGATCGCCAAGGGTGTAACCGCAATTGCAGTCACCAGCAACATCCAAGATTTGCCTGCT
GATAGCTATGCCGAGCACTTTTCGGGCCGACATCCCAATCCAGTTGGTGGAGCCGAGGCGATTATCTCGCACCTGATCGC
CAAGAAATATCGCTTGCCCGCCGCCCATGCCCCGATGATTAACCTCAAGCAAATTGACCTTGAAGATCCGATTGTCGATG
CCCGTGGCGCAGGCGAAATTACCTCGCACAGTGGGATGGCGAGCGTGCTAATTGGCTTAGCTCAGGCTCCGCAAATTACC
GCTCGGCCAACTTGCCGCATCGCCGACACGATTAATATTAATAATGTTGTGGCAGTTGTGACACCTGCTAGTGCCTTGGG
TGGCATTCCGGTGTTGTATGCCCAAAAATTTAATATTCCCGTGATTGCAGTGCACAATAATGCCACAATTTTGGAGATTA
CGCCCGATCGCTTCCCGCTTAATACCGTGATTGAAGTGCAAAATTATGCTGAAGCCGCCGGAATTATTATGGCGCTCAAG
CGTGGCCTAAACTTGAAGAGTATCCTACGACCGTTGGAAACCTTGCGCTATCAGCGTCAGGCAGTCGCTACGACTGTCGT
AAACGATGCAATGATAGCTGAACTAGCCTAA

Upstream 100 bases:

>100_bases
GCATTTATCAGATGAGGAACTTGCTTTACTCTCACAAGATCAACCATAGCCGCCGCGTCCGCAACGATAGCTTTCTTTTT
AACTAATGAAGGGCGACAGC

Downstream 100 bases:

>100_bases
CATCTTTGGTTGGCAACGATGGATCTGGGTCGTAGCAATACGGCCCAGCTTGGAGTACCCGACTGTGACAGACCAACTTC
CTTCAGCACTCCCGCTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MIHNQEFIIRKSDIANPQSLPELIETLVSGDVLRWYVSKVTADELVVEATLYSEHLADPPESVLGQFYPGKSAVLNIVPT
GVGCDIGGYAGDAGPATALLASCCDYLVTNPNAVNASNFILMDKNLVYTEGYCIDLFSRGLINLHLPYSNKIGLIIEKTD
AEHLDVVFNILNTVRAVYGVNIEEFVITDEAIGGRCIQHSSGSYVGSIDNPATLFRACEQLIAKGVTAIAVTSNIQDLPA
DSYAEHFSGRHPNPVGGAEAIISHLIAKKYRLPAAHAPMINLKQIDLEDPIVDARGAGEITSHSGMASVLIGLAQAPQIT
ARPTCRIADTININNVVAVVTPASALGGIPVLYAQKFNIPVIAVHNNATILEITPDRFPLNTVIEVQNYAEAAGIIMALK
RGLNLKSILRPLETLRYQRQAVATTVVNDAMIAELA

Sequences:

>Translated_436_residues
MIHNQEFIIRKSDIANPQSLPELIETLVSGDVLRWYVSKVTADELVVEATLYSEHLADPPESVLGQFYPGKSAVLNIVPT
GVGCDIGGYAGDAGPATALLASCCDYLVTNPNAVNASNFILMDKNLVYTEGYCIDLFSRGLINLHLPYSNKIGLIIEKTD
AEHLDVVFNILNTVRAVYGVNIEEFVITDEAIGGRCIQHSSGSYVGSIDNPATLFRACEQLIAKGVTAIAVTSNIQDLPA
DSYAEHFSGRHPNPVGGAEAIISHLIAKKYRLPAAHAPMINLKQIDLEDPIVDARGAGEITSHSGMASVLIGLAQAPQIT
ARPTCRIADTININNVVAVVTPASALGGIPVLYAQKFNIPVIAVHNNATILEITPDRFPLNTVIEVQNYAEAAGIIMALK
RGLNLKSILRPLETLRYQRQAVATTVVNDAMIAELA
>Mature_436_residues
MIHNQEFIIRKSDIANPQSLPELIETLVSGDVLRWYVSKVTADELVVEATLYSEHLADPPESVLGQFYPGKSAVLNIVPT
GVGCDIGGYAGDAGPATALLASCCDYLVTNPNAVNASNFILMDKNLVYTEGYCIDLFSRGLINLHLPYSNKIGLIIEKTD
AEHLDVVFNILNTVRAVYGVNIEEFVITDEAIGGRCIQHSSGSYVGSIDNPATLFRACEQLIAKGVTAIAVTSNIQDLPA
DSYAEHFSGRHPNPVGGAEAIISHLIAKKYRLPAAHAPMINLKQIDLEDPIVDARGAGEITSHSGMASVLIGLAQAPQIT
ARPTCRIADTININNVVAVVTPASALGGIPVLYAQKFNIPVIAVHNNATILEITPDRFPLNTVIEVQNYAEAAGIIMALK
RGLNLKSILRPLETLRYQRQAVATTVVNDAMIAELA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021763 [H]

Pfam domain/function: PF11805 DUF3326 [H]

EC number: NA

Molecular weight: Translated: 46782; Mature: 46782

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHNQEFIIRKSDIANPQSLPELIETLVSGDVLRWYVSKVTADELVVEATLYSEHLADPP
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCH
ESVLGQFYPGKSAVLNIVPTGVGCDIGGYAGDAGPATALLASCCDYLVTNPNAVNASNFI
HHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEE
LMDKNLVYTEGYCIDLFSRGLINLHLPYSNKIGLIIEKTDAEHLDVVFNILNTVRAVYGV
EEECCEEEECCEEHHHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCC
NIEEFVITDEAIGGRCIQHSSGSYVGSIDNPATLFRACEQLIAKGVTAIAVTSNIQDLPA
CHHHEEEECCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
DSYAEHFSGRHPNPVGGAEAIISHLIAKKYRLPAAHAPMINLKQIDLEDPIVDARGAGEI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
TSHSGMASVLIGLAQAPQITARPTCRIADTININNVVAVVTPASALGGIPVLYAQKFNIP
CCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECHHHHCCCEEEEEEECCCE
VIAVHNNATILEITPDRFPLNTVIEVQNYAEAAGIIMALKRGLNLKSILRPLETLRYQRQ
EEEEECCCEEEEECCCCCCCHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AVATTVVNDAMIAELA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIHNQEFIIRKSDIANPQSLPELIETLVSGDVLRWYVSKVTADELVVEATLYSEHLADPP
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCH
ESVLGQFYPGKSAVLNIVPTGVGCDIGGYAGDAGPATALLASCCDYLVTNPNAVNASNFI
HHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEE
LMDKNLVYTEGYCIDLFSRGLINLHLPYSNKIGLIIEKTDAEHLDVVFNILNTVRAVYGV
EEECCEEEECCEEHHHHCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCC
NIEEFVITDEAIGGRCIQHSSGSYVGSIDNPATLFRACEQLIAKGVTAIAVTSNIQDLPA
CHHHEEEECCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
DSYAEHFSGRHPNPVGGAEAIISHLIAKKYRLPAAHAPMINLKQIDLEDPIVDARGAGEI
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
TSHSGMASVLIGLAQAPQITARPTCRIADTININNVVAVVTPASALGGIPVLYAQKFNIP
CCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEECHHHHCCCEEEEEEECCCE
VIAVHNNATILEITPDRFPLNTVIEVQNYAEAAGIIMALKRGLNLKSILRPLETLRYQRQ
EEEEECCCEEEEECCCCCCCHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AVATTVVNDAMIAELA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3041005 [H]