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The map label for this gene is etfB [H]

Identifier: 159898359

GI number: 159898359

Start: 2133795

End: 2134568

Strand: Direct

Name: etfB [H]

Synonym: Haur_1835

Alternate gene names: 159898359

Gene position: 2133795-2134568 (Clockwise)

Preceding gene: 159898355

Following gene: 159898360

Centisome position: 33.62

GC content: 47.67

Gene sequence:

>774_bases
ATGCACGCAGTAGTTTGTGTTAAGCAAGTTCCTGAACAAAATAGTGTGAAAATCACTGCCGATAAGCAGATTAACACCGA
CGGAATCAATCCAATTATCAATTTGTTTGATGAATATGCGATTGAAGAAGCCTTGCAGTGGGCCGAAAAGAACGATGGCC
AAGTGACCGTGATCAGCCTTGGTAGCGATGATGCCACTGATTCACTCAAAAAAGCCTTGGCTATGGGTGCTAACGAAGCT
GTGTTGATCAATGACCCAGCTTTGGAACATGTTGATTCACAAAGCGCTGCCAAAGTTGTTGCCGCCGCGATCAAGAAACT
CGATAATGTTAATATCGTGTTTTGTGGCAAGCAAAGCACCGATGACGAAACCGGCCAATTTGGCCCAGCCTTGGCTCGCT
TCCTTGGTTGGTCACAACTTACCTATGTTTTCAAAGTGCACGAATTAACCGAAAGTAGCATTGTGGTTGATCGCGCCTTG
GAAGATACCCTCGAAACCGTCGAAGCCTCGTTGCCTGTCGTCGTGACCGCCGTCAAGGATTTGAACGAGCCACGTTACCC
ATCATTGTTGAAGATTCGCAAAGTCAGCAAGCAACCAATTCCAACCTGGGGTTTAAGCGATCTGGGGCTTAGCGGCAGCG
ATGTTGCTGGCAATGTCCAAGTGGCTGATCGTGTACCACCACCAGCCCGCCCATCTGGCGAGATGATGAGTGGCAACGTG
CAAACCCAAGTTAGCAGCTTAGTGCAAAAATTGGTTGAAAATCAAATCCTATAG

Upstream 100 bases:

>100_bases
AGTGCGTCATGGTCGGCGAGTCTATGGTATACTATGGCCAAAGCCACAGCACCTGCTTGTGGTGAAGGAGCCACTCAGCA
AACCAACGGAGGTTTCTTGA

Downstream 100 bases:

>100_bases
TAAATCAAAAGGCAAAAATCAGAAGGCAAAATAGCCCATACCAATGGACTACTTGCGCTATATGATTGATGATCTTGACG
TTGACTTTTGACTTTTGACT

Product: electron transfer flavoprotein subunit alpha/beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MHAVVCVKQVPEQNSVKITADKQINTDGINPIINLFDEYAIEEALQWAEKNDGQVTVISLGSDDATDSLKKALAMGANEA
VLINDPALEHVDSQSAAKVVAAAIKKLDNVNIVFCGKQSTDDETGQFGPALARFLGWSQLTYVFKVHELTESSIVVDRAL
EDTLETVEASLPVVVTAVKDLNEPRYPSLLKIRKVSKQPIPTWGLSDLGLSGSDVAGNVQVADRVPPPARPSGEMMSGNV
QTQVSSLVQKLVENQIL

Sequences:

>Translated_257_residues
MHAVVCVKQVPEQNSVKITADKQINTDGINPIINLFDEYAIEEALQWAEKNDGQVTVISLGSDDATDSLKKALAMGANEA
VLINDPALEHVDSQSAAKVVAAAIKKLDNVNIVFCGKQSTDDETGQFGPALARFLGWSQLTYVFKVHELTESSIVVDRAL
EDTLETVEASLPVVVTAVKDLNEPRYPSLLKIRKVSKQPIPTWGLSDLGLSGSDVAGNVQVADRVPPPARPSGEMMSGNV
QTQVSSLVQKLVENQIL
>Mature_257_residues
MHAVVCVKQVPEQNSVKITADKQINTDGINPIINLFDEYAIEEALQWAEKNDGQVTVISLGSDDATDSLKKALAMGANEA
VLINDPALEHVDSQSAAKVVAAAIKKLDNVNIVFCGKQSTDDETGQFGPALARFLGWSQLTYVFKVHELTESSIVVDRAL
EDTLETVEASLPVVVTAVKDLNEPRYPSLLKIRKVSKQPIPTWGLSDLGLSGSDVAGNVQVADRVPPPARPSGEMMSGNV
QTQVSSLVQKLVENQIL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=238, Percent_Identity=33.6134453781513, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI62420877, Length=224, Percent_Identity=33.9285714285714, Blast_Score=108, Evalue=6e-24,
Organism=Escherichia coli, GI2367123, Length=229, Percent_Identity=31.4410480349345, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87081682, Length=255, Percent_Identity=26.6666666666667, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25141345, Length=259, Percent_Identity=32.046332046332, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6321646, Length=180, Percent_Identity=39.4444444444444, Blast_Score=115, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24651147, Length=244, Percent_Identity=32.3770491803279, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24651145, Length=244, Percent_Identity=32.3770491803279, Blast_Score=97, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27672; Mature: 27672

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAVVCVKQVPEQNSVKITADKQINTDGINPIINLFDEYAIEEALQWAEKNDGQVTVISL
CCEEEEEHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
GSDDATDSLKKALAMGANEAVLINDPALEHVDSQSAAKVVAAAIKKLDNVNIVFCGKQST
CCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
DDETGQFGPALARFLGWSQLTYVFKVHELTESSIVVDRALEDTLETVEASLPVVVTAVKD
CCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHH
LNEPRYPSLLKIRKVSKQPIPTWGLSDLGLSGSDVAGNVQVADRVPPPARPSGEMMSGNV
CCCCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCH
QTQVSSLVQKLVENQIL
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHAVVCVKQVPEQNSVKITADKQINTDGINPIINLFDEYAIEEALQWAEKNDGQVTVISL
CCEEEEEHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
GSDDATDSLKKALAMGANEAVLINDPALEHVDSQSAAKVVAAAIKKLDNVNIVFCGKQST
CCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
DDETGQFGPALARFLGWSQLTYVFKVHELTESSIVVDRALEDTLETVEASLPVVVTAVKD
CCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHH
LNEPRYPSLLKIRKVSKQPIPTWGLSDLGLSGSDVAGNVQVADRVPPPARPSGEMMSGNV
CCCCCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCH
QTQVSSLVQKLVENQIL
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA