| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898346
Identifier: 159898346
GI number: 159898346
Start: 2119320
End: 2120891
Strand: Direct
Name: 159898346
Synonym: Haur_1822
Alternate gene names: NA
Gene position: 2119320-2120891 (Clockwise)
Preceding gene: 159898344
Following gene: 159898354
Centisome position: 33.39
GC content: 41.48
Gene sequence:
>1572_bases ATGGCACACCCAATTTTAGTGCTTGGCAATGTTCGATCAGGTCGCCATAGTCTGATTCAGGCCTTAATTCAAGCAAAACA ACCTGTAGAACAACCTGTTGCACTGATCTATGAACCAAATAATCGTACCCGTGCCCAGTTTGGTTTTGAGGGACATACGA TCACATTTGAATGGATAACCAATTATGCCCTTGAGCCTGAGGATGAACTTGAAGCCTTCGTGCAACGCCCTTGCGTTGGG GTGATTTATTGTATCGAGCCAGGCCACGATCGTGATCATTGGTTGATGGTTCCACCAATGAGCCAAGCTCGCCAGTTAGT CGATTTTGTTAAATCTTTTTGGCAATCTAATAAAGCTTGGGATACGTTGCCATGGTTGTGGGTGCTCACGAAATCTGATC TTGCAAGCGCGAATTTGCTAGCGCCATTGATGGCCAAAATTGATCCATATGGACAGCCACAGCAACCTATTTGCTGTTCG GCCTTGGATGCGCACAGTTTTGAGCCAATTTATGCTTGGCTGAGGACGATTGTTCAAACTTGCCCAACCTGCATTGATCA ACTTCAACCATTAGCTGAATTTCGTGCACATATTCCAGCTTTACCCTTGCCGATCAACTGGCATGCAGTGCCAAGCTATC CCAAACTGAATCTAGCAATAATGGCAATCGTGCGGCAAGCCTTGCCGCCTGTGTGGCAAATTAGCGAGTATTTGCCACAA CTCGGTTTACATATAAAAATTGAAATCGCTGGCATGGCTATCAATCAAGCCGAAATTCAGCCTTGGATTGGTGAAGAGTT ACCCTGTTATCTTGATTGGACAACTCCAATCGAGCCACAGATCTTGGAAATTCCACCACCGAATCACTCAATTATGCTTA GCTTGAAGCCCAATCAATTGGAAGTGATTCCGATGGATGTTCCTACCAGTTTGCTTAAAACAATTCATAGTTTAGGTGCG AGTCGGCCCGTTTTAGCATTATTGATTGATCAACAAACGACAAACGTCTTTTGGGTTTGTCTAAATGATTATATTGATAA AATTAGTTTGCCAGCCCAAGCTGGCCAATTTAATCATTCAATCCATACAACAATCTTTATTCCGACTAAAAATCGCCTAG AACATAATGATCTGACAATCGATATTTTAGGATTTTATGCCAAACGCGCTAAACTATTGGCAGCATTTTCAGTGTTTCGG GAACAAAAAGCTAGATTAGACTATTTGAAAGATGCTGAATTAATCAACCAAGCGCAAATTTTTGCCCGAATGAACATTCA CTATGATTTCTGGCAAAGCTGCCGCCTATGGAAACCAATTATTCAAATTTATCATAAACTTGTACATCTGGCAGATCATG GCTTTACTGATCCAAAAATGCATAAGAAAGCCCAAAAACATCAACATTATGATGAATCAATTTGGGAATCAGAATGGGCT GAAAAACCAGTTAAACTAGTTGATTCAATAACTTATAGTGGCATTATTTTTTGCTGGCTGGATATGCAACAACTAGCGGC AAGTTATGAAATGCATTGCCGTTGTTGGTTCCTGCCAACATTTTCAGGATAA
Upstream 100 bases:
>100_bases TCCAAACCTCCAAATAGTACCATTCAGCATTGCTTTAGACGTTCTAGATTGGGGATGGGTTACAATACCATGAAGGGTCG TTGATATGTGAGGACGCAGT
Downstream 100 bases:
>100_bases AGGATATTCAATGGTTATTGTCTGCGATAATCTCCGTGATTTTGCAATTCAGGCTCAATATTTGATTTTTTAAATTCAAG TATCGTTATAGAAATGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MAHPILVLGNVRSGRHSLIQALIQAKQPVEQPVALIYEPNNRTRAQFGFEGHTITFEWITNYALEPEDELEAFVQRPCVG VIYCIEPGHDRDHWLMVPPMSQARQLVDFVKSFWQSNKAWDTLPWLWVLTKSDLASANLLAPLMAKIDPYGQPQQPICCS ALDAHSFEPIYAWLRTIVQTCPTCIDQLQPLAEFRAHIPALPLPINWHAVPSYPKLNLAIMAIVRQALPPVWQISEYLPQ LGLHIKIEIAGMAINQAEIQPWIGEELPCYLDWTTPIEPQILEIPPPNHSIMLSLKPNQLEVIPMDVPTSLLKTIHSLGA SRPVLALLIDQQTTNVFWVCLNDYIDKISLPAQAGQFNHSIHTTIFIPTKNRLEHNDLTIDILGFYAKRAKLLAAFSVFR EQKARLDYLKDAELINQAQIFARMNIHYDFWQSCRLWKPIIQIYHKLVHLADHGFTDPKMHKKAQKHQHYDESIWESEWA EKPVKLVDSITYSGIIFCWLDMQQLAASYEMHCRCWFLPTFSG
Sequences:
>Translated_523_residues MAHPILVLGNVRSGRHSLIQALIQAKQPVEQPVALIYEPNNRTRAQFGFEGHTITFEWITNYALEPEDELEAFVQRPCVG VIYCIEPGHDRDHWLMVPPMSQARQLVDFVKSFWQSNKAWDTLPWLWVLTKSDLASANLLAPLMAKIDPYGQPQQPICCS ALDAHSFEPIYAWLRTIVQTCPTCIDQLQPLAEFRAHIPALPLPINWHAVPSYPKLNLAIMAIVRQALPPVWQISEYLPQ LGLHIKIEIAGMAINQAEIQPWIGEELPCYLDWTTPIEPQILEIPPPNHSIMLSLKPNQLEVIPMDVPTSLLKTIHSLGA SRPVLALLIDQQTTNVFWVCLNDYIDKISLPAQAGQFNHSIHTTIFIPTKNRLEHNDLTIDILGFYAKRAKLLAAFSVFR EQKARLDYLKDAELINQAQIFARMNIHYDFWQSCRLWKPIIQIYHKLVHLADHGFTDPKMHKKAQKHQHYDESIWESEWA EKPVKLVDSITYSGIIFCWLDMQQLAASYEMHCRCWFLPTFSG >Mature_522_residues AHPILVLGNVRSGRHSLIQALIQAKQPVEQPVALIYEPNNRTRAQFGFEGHTITFEWITNYALEPEDELEAFVQRPCVGV IYCIEPGHDRDHWLMVPPMSQARQLVDFVKSFWQSNKAWDTLPWLWVLTKSDLASANLLAPLMAKIDPYGQPQQPICCSA LDAHSFEPIYAWLRTIVQTCPTCIDQLQPLAEFRAHIPALPLPINWHAVPSYPKLNLAIMAIVRQALPPVWQISEYLPQL GLHIKIEIAGMAINQAEIQPWIGEELPCYLDWTTPIEPQILEIPPPNHSIMLSLKPNQLEVIPMDVPTSLLKTIHSLGAS RPVLALLIDQQTTNVFWVCLNDYIDKISLPAQAGQFNHSIHTTIFIPTKNRLEHNDLTIDILGFYAKRAKLLAAFSVFRE QKARLDYLKDAELINQAQIFARMNIHYDFWQSCRLWKPIIQIYHKLVHLADHGFTDPKMHKKAQKHQHYDESIWESEWAE KPVKLVDSITYSGIIFCWLDMQQLAASYEMHCRCWFLPTFSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60097; Mature: 59966
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPILVLGNVRSGRHSLIQALIQAKQPVEQPVALIYEPNNRTRAQFGFEGHTITFEWIT CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCEEEEEEEE NYALEPEDELEAFVQRPCVGVIYCIEPGHDRDHWLMVPPMSQARQLVDFVKSFWQSNKAW CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCC DTLPWLWVLTKSDLASANLLAPLMAKIDPYGQPQQPICCSALDAHSFEPIYAWLRTIVQT CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHH CPTCIDQLQPLAEFRAHIPALPLPINWHAVPSYPKLNLAIMAIVRQALPPVWQISEYLPQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH LGLHIKIEIAGMAINQAEIQPWIGEELPCYLDWTTPIEPQILEIPPPNHSIMLSLKPNQL CCCEEEEEEEEEEECHHHCCCCCCCCCCEEEECCCCCCCEEEECCCCCCEEEEEECCCCE EVIPMDVPTSLLKTIHSLGASRPVLALLIDQQTTNVFWVCLNDYIDKISLPAQAGQFNHS EEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEHHHHHHHCCCCCCCCCCCCC IHTTIFIPTKNRLEHNDLTIDILGFYAKRAKLLAAFSVFREQKARLDYLKDAELINQAQI EEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FARMNIHYDFWQSCRLWKPIIQIYHKLVHLADHGFTDPKMHKKAQKHQHYDESIWESEWA HHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHH EKPVKLVDSITYSGIIFCWLDMQQLAASYEMHCRCWFLPTFSG HCHHHHHHHHHHCCEEEEEECHHHHHCCCCCEEEEEEECCCCC >Mature Secondary Structure AHPILVLGNVRSGRHSLIQALIQAKQPVEQPVALIYEPNNRTRAQFGFEGHTITFEWIT CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCEEEEEEEE NYALEPEDELEAFVQRPCVGVIYCIEPGHDRDHWLMVPPMSQARQLVDFVKSFWQSNKAW CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCC DTLPWLWVLTKSDLASANLLAPLMAKIDPYGQPQQPICCSALDAHSFEPIYAWLRTIVQT CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHH CPTCIDQLQPLAEFRAHIPALPLPINWHAVPSYPKLNLAIMAIVRQALPPVWQISEYLPQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH LGLHIKIEIAGMAINQAEIQPWIGEELPCYLDWTTPIEPQILEIPPPNHSIMLSLKPNQL CCCEEEEEEEEEEECHHHCCCCCCCCCCEEEECCCCCCCEEEECCCCCCEEEEEECCCCE EVIPMDVPTSLLKTIHSLGASRPVLALLIDQQTTNVFWVCLNDYIDKISLPAQAGQFNHS EEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEHHHHHHHCCCCCCCCCCCCC IHTTIFIPTKNRLEHNDLTIDILGFYAKRAKLLAAFSVFREQKARLDYLKDAELINQAQI EEEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FARMNIHYDFWQSCRLWKPIIQIYHKLVHLADHGFTDPKMHKKAQKHQHYDESIWESEWA HHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHH EKPVKLVDSITYSGIIFCWLDMQQLAASYEMHCRCWFLPTFSG HCHHHHHHHHHHCCEEEEEECHHHHHCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA