The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898343

Identifier: 159898343

GI number: 159898343

Start: 2116902

End: 2117924

Strand: Direct

Name: 159898343

Synonym: Haur_1819

Alternate gene names: NA

Gene position: 2116902-2117924 (Clockwise)

Preceding gene: 159898342

Following gene: 159898344

Centisome position: 33.35

GC content: 49.56

Gene sequence:

>1023_bases
GTGCCAAGTAAAATTGACCCTAATGATTGGGATGCAAACTTTTCGGCCAAGGGGCCGCGTCAACAAGGCCCACTCGGTGT
TTTACTCCAAACCTTGTTAGTGCTTGGGATTGCTGGTGGATTAGGCTATGGGGTTTGGTTGCTTAATGAAACTATGAGTG
AGCAAAATGCTGCAAATGCTGCTACGGCTACGGCAGTTGCTCCAACGATATTTGCGCGGGCCACCCAACGCTCAATCCAA
GCAACCCAAGATGCGATTCCAACCGCGACCCCTAACTTGCCAATTGGGCGTTCGCTGGCAACCTCGGGGCTACGATTTGA
GCCAAATGAACGCTCTCAATCCAAAGGTAATGTCAATCCAAATGATAGCCTGCAATATATCGAATCACGTGAGGTTGGTG
GGGTGCTTTGGTGGAATGTGCGCTTGTTTGAACGAGCAAACATGGATTTGCCCGCAGCCGAGTTAGGTACCAGTGGTTGG
GTTTTGGCTACGACTGTGACTGAACCAAGCGCACCTCCGCCGGTTGTCGCCGATTCAACCGCTGTTCCAGCTGGCCCTGT
CGATTTACCAACTACGCCAATTGATCCAAGTAGCGTGATTTTAACCCGCAACGCGAACACCAATATGAGTGTTTCACACC
CCCAAGCCTGGACAGAATATGTGATTGGCGAAAACCTTGCTGTTTTTTTCTCAACCGCAGTCGATGGCGAGCAAGGCATC
TTGGCGAATAAAGTGATTGGTAAAAACAACGATGTAGCTGGCATTCAAGCGGCTATCGAAGAGACCATAAATATCCTAGC
AGCACCCAATAGCCAACGTGAATATGCTATTAATGCGTCGGAAGGAACGGTTAAGTTTGTGCGGGTTGTGCGTGGTCAGG
AGGCTAAAATTCAGGCGTTCGTTACGGTTAAGCCTGGCCCAGGTGGTAGTTTAGGCGTGATTGTCGGCTTTGTGCCCGAA
TCAGGCTTTGCTGCCAACCAAGCTATTTTGCAACAAATGACCCGTAGCGCAATTATTCAATAA

Upstream 100 bases:

>100_bases
CGGCTCGACGCATTCTATGCTGCCATGCTGGTTGCTATCCCAAATTTGCACTTTTAACGTATACTGGTGCGCGTGCAATT
GTTCACATGGGAGGCGACCA

Downstream 100 bases:

>100_bases
CCAGATTGTTGGTGGTATGGCTCAACTTGCATAGCACCAACAATCCTTGCTCTTGCCGGAGGTCATGTTAATGGACCACG
AAAAAATATTGTTGCCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MPSKIDPNDWDANFSAKGPRQQGPLGVLLQTLLVLGIAGGLGYGVWLLNETMSEQNAANAATATAVAPTIFARATQRSIQ
ATQDAIPTATPNLPIGRSLATSGLRFEPNERSQSKGNVNPNDSLQYIESREVGGVLWWNVRLFERANMDLPAAELGTSGW
VLATTVTEPSAPPPVVADSTAVPAGPVDLPTTPIDPSSVILTRNANTNMSVSHPQAWTEYVIGENLAVFFSTAVDGEQGI
LANKVIGKNNDVAGIQAAIEETINILAAPNSQREYAINASEGTVKFVRVVRGQEAKIQAFVTVKPGPGGSLGVIVGFVPE
SGFAANQAILQQMTRSAIIQ

Sequences:

>Translated_340_residues
MPSKIDPNDWDANFSAKGPRQQGPLGVLLQTLLVLGIAGGLGYGVWLLNETMSEQNAANAATATAVAPTIFARATQRSIQ
ATQDAIPTATPNLPIGRSLATSGLRFEPNERSQSKGNVNPNDSLQYIESREVGGVLWWNVRLFERANMDLPAAELGTSGW
VLATTVTEPSAPPPVVADSTAVPAGPVDLPTTPIDPSSVILTRNANTNMSVSHPQAWTEYVIGENLAVFFSTAVDGEQGI
LANKVIGKNNDVAGIQAAIEETINILAAPNSQREYAINASEGTVKFVRVVRGQEAKIQAFVTVKPGPGGSLGVIVGFVPE
SGFAANQAILQQMTRSAIIQ
>Mature_339_residues
PSKIDPNDWDANFSAKGPRQQGPLGVLLQTLLVLGIAGGLGYGVWLLNETMSEQNAANAATATAVAPTIFARATQRSIQA
TQDAIPTATPNLPIGRSLATSGLRFEPNERSQSKGNVNPNDSLQYIESREVGGVLWWNVRLFERANMDLPAAELGTSGWV
LATTVTEPSAPPPVVADSTAVPAGPVDLPTTPIDPSSVILTRNANTNMSVSHPQAWTEYVIGENLAVFFSTAVDGEQGIL
ANKVIGKNNDVAGIQAAIEETINILAAPNSQREYAINASEGTVKFVRVVRGQEAKIQAFVTVKPGPGGSLGVIVGFVPES
GFAANQAILQQMTRSAIIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35805; Mature: 35674

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKIDPNDWDANFSAKGPRQQGPLGVLLQTLLVLGIAGGLGYGVWLLNETMSEQNAANA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEEEHHHHHHHCCCCH
ATATAVAPTIFARATQRSIQATQDAIPTATPNLPIGRSLATSGLRFEPNERSQSKGNVNP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEECCCCCCCCCCCCCC
NDSLQYIESREVGGVLWWNVRLFERANMDLPAAELGTSGWVLATTVTEPSAPPPVVADST
CCCHHHHHCCCCCEEEEEEEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCCCCEECCC
AVPAGPVDLPTTPIDPSSVILTRNANTNMSVSHPQAWTEYVIGENLAVFFSTAVDGEQGI
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCHHHHHHHHCCCEEEEEEECCCCCCCE
LANKVIGKNNDVAGIQAAIEETINILAAPNSQREYAINASEGTVKFVRVVRGQEAKIQAF
EEHHCCCCCCCCHHHHHHHHHHHHEEECCCCCCEEEEECCCCCEEEHHHHCCCCCEEEEE
VTVKPGPGGSLGVIVGFVPESGFAANQAILQQMTRSAIIQ
EEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSKIDPNDWDANFSAKGPRQQGPLGVLLQTLLVLGIAGGLGYGVWLLNETMSEQNAANA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEEEHHHHHHHCCCCH
ATATAVAPTIFARATQRSIQATQDAIPTATPNLPIGRSLATSGLRFEPNERSQSKGNVNP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEECCCCCCCCCCCCCC
NDSLQYIESREVGGVLWWNVRLFERANMDLPAAELGTSGWVLATTVTEPSAPPPVVADST
CCCHHHHHCCCCCEEEEEEEEEEEECCCCCCHHHHCCCCEEEEEEECCCCCCCCCEECCC
AVPAGPVDLPTTPIDPSSVILTRNANTNMSVSHPQAWTEYVIGENLAVFFSTAVDGEQGI
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCHHHHHHHHCCCEEEEEEECCCCCCCE
LANKVIGKNNDVAGIQAAIEETINILAAPNSQREYAINASEGTVKFVRVVRGQEAKIQAF
EEHHCCCCCCCCHHHHHHHHHHHHEEECCCCCCEEEEECCCCCEEEHHHHCCCCCEEEEE
VTVKPGPGGSLGVIVGFVPESGFAANQAILQQMTRSAIIQ
EEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA