| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is dhbC [H]
Identifier: 159898326
GI number: 159898326
Start: 2091069
End: 2092256
Strand: Direct
Name: dhbC [H]
Synonym: Haur_1802
Alternate gene names: 159898326
Gene position: 2091069-2092256 (Clockwise)
Preceding gene: 159898325
Following gene: 159898327
Centisome position: 32.95
GC content: 54.8
Gene sequence:
>1188_bases ATGAGCAGTTTTGAACAAGAACGGCTACGCGAATCGGCGTGGCAATTGCTAGACAACTATCAAGCAGAATCGGCCTTTTT CTTTGCATCGCCCAATCATACCTTGTTGGGCCAATTAAGCTATGTTGATTTGATCAGCCAAACCGCCTTGCTTGAGCTTG AGCAACGAGTTAACGAGGCGCTGCAACGGGCTGAACGTGGTGGTGAAGTTAATCCAGTCGTGGTTGGGGCATTGCCTTTT GCTCCCGATGCGGCGGCTTATTTGGCCTTGCCATCGCGGGTGGTTTGGGCTGGCCCATTGCACGCCGAAGCCCAACCCTA TTGGCATAACCAGCGTTTGCCGCATTGCAGCATCGAGCCAATGCCAGCGCCCGAACACTACAAACAGGGTGTGGCTCAAG CCTTGGCCAAAATGCAGGCTGGCGATTTGCAAAAAGTTGTGCTCTCACGCTCGTTGCAATTGACCGCCGAAGCACCGCTT GATGTGAATTTGATTCTGGCGAATTTGGCACGTAACAACAAAACTGGCTATACCTTTGCGGTGCCGTTGCCAACCCGCCG CGCGTTGGTTGGGGCTAGCCCTGAATTGTTGCTGGCGCGTAATGGCAATCAAGTGATCGCCAATCCCTTAGCTGGTTCGA TTCCGCGCAGCGCCGACCCTGAAGAAGATGCGCGGCGGGCAGCAGGTTTGCTCGAATCGCCCAAAGATTTGCATGAACAT AAGGTTGTAATTGAGGCGGTTGCGGCGGCCTTAGCGCCATTCTGTCTGAGCCTTGATGTGCCGCAACCAACCGTTATTTC CACCGCGACGATGTGGCATCTCTCAACAACCTTGGTTGGCGAATTAAAGCCTGATGCACCTTCATCGTTGGGTTTGGCAT TGGCCTTGCACCCAACTCCAGCGGTCTGTGGTACGCCTACCGAGGTCGCCCGCGCCGCCATCCGCGAAATCGAGCCGTTT GATCGCGGCTTTTTCACGGGGATGGTTGGTTGGTGCAACGCCCAAGGCGATGGCGAATGGATTGTGACGATTCGTTGTGC CGAAGTTGTTGATCAATCGTTGCGTTTATTTGCTGGTGCTGGGGTGGTACTAGGCTCGACTCCTGAAGCCGAGTTGGCCG AAACTGCGGCGAAATTCCGCACGATGTTGTTGGCGATGGGCATCGATAGCGAAGGCGAGGTGGCCTAA
Upstream 100 bases:
>100_bases TTGATGGAAAAAATCAATCAACAATCCGCCCAGCCAGTTGCGCGGGAAGTGGGTTTGAACTAAGCCAAGGCTGTGTAGCA GGCAATTAAGGATGACGATC
Downstream 100 bases:
>100_bases TGGCTGAGCTGACGCTTGGCCTTGAAGGCACAACTGCTTGGCCCGCCGAGTTTGCCGAACGCTATCGTAAGGCTGGCTAT TGGGTTGATCAGACCTTTGG
Product: isochorismate synthase
Products: NA
Alternate protein names: Isochorismate mutase [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSSFEQERLRESAWQLLDNYQAESAFFFASPNHTLLGQLSYVDLISQTALLELEQRVNEALQRAERGGEVNPVVVGALPF APDAAAYLALPSRVVWAGPLHAEAQPYWHNQRLPHCSIEPMPAPEHYKQGVAQALAKMQAGDLQKVVLSRSLQLTAEAPL DVNLILANLARNNKTGYTFAVPLPTRRALVGASPELLLARNGNQVIANPLAGSIPRSADPEEDARRAAGLLESPKDLHEH KVVIEAVAAALAPFCLSLDVPQPTVISTATMWHLSTTLVGELKPDAPSSLGLALALHPTPAVCGTPTEVARAAIREIEPF DRGFFTGMVGWCNAQGDGEWIVTIRCAEVVDQSLRLFAGAGVVLGSTPEAELAETAAKFRTMLLAMGIDSEGEVA
Sequences:
>Translated_395_residues MSSFEQERLRESAWQLLDNYQAESAFFFASPNHTLLGQLSYVDLISQTALLELEQRVNEALQRAERGGEVNPVVVGALPF APDAAAYLALPSRVVWAGPLHAEAQPYWHNQRLPHCSIEPMPAPEHYKQGVAQALAKMQAGDLQKVVLSRSLQLTAEAPL DVNLILANLARNNKTGYTFAVPLPTRRALVGASPELLLARNGNQVIANPLAGSIPRSADPEEDARRAAGLLESPKDLHEH KVVIEAVAAALAPFCLSLDVPQPTVISTATMWHLSTTLVGELKPDAPSSLGLALALHPTPAVCGTPTEVARAAIREIEPF DRGFFTGMVGWCNAQGDGEWIVTIRCAEVVDQSLRLFAGAGVVLGSTPEAELAETAAKFRTMLLAMGIDSEGEVA >Mature_394_residues SSFEQERLRESAWQLLDNYQAESAFFFASPNHTLLGQLSYVDLISQTALLELEQRVNEALQRAERGGEVNPVVVGALPFA PDAAAYLALPSRVVWAGPLHAEAQPYWHNQRLPHCSIEPMPAPEHYKQGVAQALAKMQAGDLQKVVLSRSLQLTAEAPLD VNLILANLARNNKTGYTFAVPLPTRRALVGASPELLLARNGNQVIANPLAGSIPRSADPEEDARRAAGLLESPKDLHEHK VVIEAVAAALAPFCLSLDVPQPTVISTATMWHLSTTLVGELKPDAPSSLGLALALHPTPAVCGTPTEVARAAIREIEPFD RGFFTGMVGWCNAQGDGEWIVTIRCAEVVDQSLRLFAGAGVVLGSTPEAELAETAAKFRTMLLAMGIDSEGEVA
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: COG1169
COG function: function code HQ; Isochorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786809, Length=377, Percent_Identity=38.4615384615385, Blast_Score=233, Evalue=1e-62, Organism=Escherichia coli, GI87082077, Length=284, Percent_Identity=31.6901408450704, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1787518, Length=319, Percent_Identity=31.0344827586207, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788114, Length=262, Percent_Identity=25.9541984732824, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6320935, Length=269, Percent_Identity=28.2527881040892, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR015890 - InterPro: IPR004561 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =5.4.4.2 [H]
Molecular weight: Translated: 42408; Mature: 42277
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFEQERLRESAWQLLDNYQAESAFFFASPNHTLLGQLSYVDLISQTALLELEQRVNEA CCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH LQRAERGGEVNPVVVGALPFAPDAAAYLALPSRVVWAGPLHAEAQPYWHNQRLPHCSIEP HHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC MPAPEHYKQGVAQALAKMQAGDLQKVVLSRSLQLTAEAPLDVNLILANLARNNKTGYTFA CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCHHHHEEEHHCCCCCCEEEE VPLPTRRALVGASPELLLARNGNQVIANPLAGSIPRSADPEEDARRAAGLLESPKDLHEH ECCCCCHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH KVVIEAVAAALAPFCLSLDVPQPTVISTATMWHLSTTLVGELKPDAPSSLGLALALHPTP HHHHHHHHHHHHHHHEECCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC AVCGTPTEVARAAIREIEPFDRGFFTGMVGWCNAQGDGEWIVTIRCAEVVDQSLRLFAGA CCCCCHHHHHHHHHHHCCCCCCHHHHHHHEEECCCCCCCEEEEEEEHHHHHHHHHHHHCC GVVLGSTPEAELAETAAKFRTMLLAMGIDSEGEVA CEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SSFEQERLRESAWQLLDNYQAESAFFFASPNHTLLGQLSYVDLISQTALLELEQRVNEA CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH LQRAERGGEVNPVVVGALPFAPDAAAYLALPSRVVWAGPLHAEAQPYWHNQRLPHCSIEP HHHHHHCCCCCCEEEEECCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC MPAPEHYKQGVAQALAKMQAGDLQKVVLSRSLQLTAEAPLDVNLILANLARNNKTGYTFA CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCHHHHEEEHHCCCCCCEEEE VPLPTRRALVGASPELLLARNGNQVIANPLAGSIPRSADPEEDARRAAGLLESPKDLHEH ECCCCCHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH KVVIEAVAAALAPFCLSLDVPQPTVISTATMWHLSTTLVGELKPDAPSSLGLALALHPTP HHHHHHHHHHHHHHHEECCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC AVCGTPTEVARAAIREIEPFDRGFFTGMVGWCNAQGDGEWIVTIRCAEVVDQSLRLFAGA CCCCCHHHHHHHHHHHCCCCCCHHHHHHHEEECCCCCCCEEEEEEEHHHHHHHHHHHHCC GVVLGSTPEAELAETAAKFRTMLLAMGIDSEGEVA CEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550523; 9384377 [H]