| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is wbbL [H]
Identifier: 159898319
GI number: 159898319
Start: 2083356
End: 2084276
Strand: Direct
Name: wbbL [H]
Synonym: Haur_1795
Alternate gene names: 159898319
Gene position: 2083356-2084276 (Clockwise)
Preceding gene: 159898316
Following gene: 159898320
Centisome position: 32.83
GC content: 50.71
Gene sequence:
>921_bases ATGAACCATATTGCTGTTGTGATTCTCAATTTTAATTCGGGCGATGTCCTGAAGCCGTGTTTAGCCTCACTTGCCGACCA AGATTGGAATGGTCGGCTTGATGTGTGGGTGGTCGATAATGCTTCATCCGACGAGAGCGTGGCCATGGTGCGCGAGGCGT TTCCATGGGTGCGGTTAATTGCCTCGCCGCAAAATAGTGGCTTTTCGGCGGGCAATAATCTTGCTTTGCGCCAGATTTTG GCCGAAACTCCAACTCCTGAGGCTGTGTTGGTGCTTAACCCCGATACGGTTGTGCCAACGAATGGTATTGCGGGCATGGT TGAGGCCTTAGTTGAACGCCCAAAAGCAGGCATTGTCGGGCCAAAATTGGTGCTAGCCGATGGCTCGCTCGATTTAGCAT GTCGGCGGGCGTTTCCTTCAGCCGAGGTAGCACTCTACCGTATGATTGGTTTATCGAAGCTATTTCCCCGTTCGCCGCGC TTTGGCCGCTACAACATGACCTACCTCGACCCTGATCAAGCCACCGAGGTTGATTCGATTGTTGGGGCGGCGATGTTGTT GCGGACTGAGGTTTTGCGCGATGTAGGCTTGCTCGATGAAGCCTTTTTTATGTATGGCGAAGATATTGATTGGTGCTATC GAACAAAAAGCTATGGCTGGCAAGTTTGGTATGATCCACGGGTGACGATTTTGCACTATAAACGGGTTTCGAGCACTCGT CGCGCCGTGCCATCAATTCGGGCTTTTTATGATGCCATGCGGATTTTTCACCGCAAACATTATGAAGCAACTACATTGGC CCCATTGAATTGGCTGATTTACCTTGGAATTACCCTAAAAGAATGGCAAGCGCTGGTGCGTAATCGATTGCGCCCATTAG CCTCACGACGAGCAACCCATGGCAACAACCACAATGCTTAA
Upstream 100 bases:
>100_bases CGCAGCCCATTATACCAAAGCAGAATCAAGGCATTTTGCTGGGGTTTGTTACCCGAATGATACAATTGACCACGCTATTT TGCAGTATAATTGGCAGGCT
Downstream 100 bases:
>100_bases TCAAACAACCGTTGTTACGCGTCGTTATCGCTATGTTGTGCTGTTGCTGCTGATGGGCTGCGATATTATTGGCGTGAACG GCGGTTTTTTTCTGGCCTAC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MNHIAVVILNFNSGDVLKPCLASLADQDWNGRLDVWVVDNASSDESVAMVREAFPWVRLIASPQNSGFSAGNNLALRQIL AETPTPEAVLVLNPDTVVPTNGIAGMVEALVERPKAGIVGPKLVLADGSLDLACRRAFPSAEVALYRMIGLSKLFPRSPR FGRYNMTYLDPDQATEVDSIVGAAMLLRTEVLRDVGLLDEAFFMYGEDIDWCYRTKSYGWQVWYDPRVTILHYKRVSSTR RAVPSIRAFYDAMRIFHRKHYEATTLAPLNWLIYLGITLKEWQALVRNRLRPLASRRATHGNNHNA
Sequences:
>Translated_306_residues MNHIAVVILNFNSGDVLKPCLASLADQDWNGRLDVWVVDNASSDESVAMVREAFPWVRLIASPQNSGFSAGNNLALRQIL AETPTPEAVLVLNPDTVVPTNGIAGMVEALVERPKAGIVGPKLVLADGSLDLACRRAFPSAEVALYRMIGLSKLFPRSPR FGRYNMTYLDPDQATEVDSIVGAAMLLRTEVLRDVGLLDEAFFMYGEDIDWCYRTKSYGWQVWYDPRVTILHYKRVSSTR RAVPSIRAFYDAMRIFHRKHYEATTLAPLNWLIYLGITLKEWQALVRNRLRPLASRRATHGNNHNA >Mature_306_residues MNHIAVVILNFNSGDVLKPCLASLADQDWNGRLDVWVVDNASSDESVAMVREAFPWVRLIASPQNSGFSAGNNLALRQIL AETPTPEAVLVLNPDTVVPTNGIAGMVEALVERPKAGIVGPKLVLADGSLDLACRRAFPSAEVALYRMIGLSKLFPRSPR FGRYNMTYLDPDQATEVDSIVGAAMLLRTEVLRDVGLLDEAFFMYGEDIDWCYRTKSYGWQVWYDPRVTILHYKRVSSTR RAVPSIRAFYDAMRIFHRKHYEATTLAPLNWLIYLGITLKEWQALVRNRLRPLASRRATHGNNHNA
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 34374; Mature: 34374
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHIAVVILNFNSGDVLKPCLASLADQDWNGRLDVWVVDNASSDESVAMVREAFPWVRLI CCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEEE ASPQNSGFSAGNNLALRQILAETPTPEAVLVLNPDTVVPTNGIAGMVEALVERPKAGIVG ECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCC PKLVLADGSLDLACRRAFPSAEVALYRMIGLSKLFPRSPRFGRYNMTYLDPDQATEVDSI CEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHH VGAAMLLRTEVLRDVGLLDEAFFMYGEDIDWCYRTKSYGWQVWYDPRVTILHYKRVSSTR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCEEEEECCEEEEEEEHHHHHHH RAVPSIRAFYDAMRIFHRKHYEATTLAPLNWLIYLGITLKEWQALVRNRLRPLASRRATH HHHHHHHHHHHHHHHHHHHCCCCHHCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC GNNHNA CCCCCC >Mature Secondary Structure MNHIAVVILNFNSGDVLKPCLASLADQDWNGRLDVWVVDNASSDESVAMVREAFPWVRLI CCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEEE ASPQNSGFSAGNNLALRQILAETPTPEAVLVLNPDTVVPTNGIAGMVEALVERPKAGIVG ECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCC PKLVLADGSLDLACRRAFPSAEVALYRMIGLSKLFPRSPRFGRYNMTYLDPDQATEVDSI CEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHH VGAAMLLRTEVLRDVGLLDEAFFMYGEDIDWCYRTKSYGWQVWYDPRVTILHYKRVSSTR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEECCCCCEEEEECCEEEEEEEHHHHHHH RAVPSIRAFYDAMRIFHRKHYEATTLAPLNWLIYLGITLKEWQALVRNRLRPLASRRATH HHHHHHHHHHHHHHHHHHHCCCCHHCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC GNNHNA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]