| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898314
Identifier: 159898314
GI number: 159898314
Start: 2078953
End: 2079894
Strand: Direct
Name: 159898314
Synonym: Haur_1790
Alternate gene names: NA
Gene position: 2078953-2079894 (Clockwise)
Preceding gene: 159898313
Following gene: 159898315
Centisome position: 32.76
GC content: 41.51
Gene sequence:
>942_bases ATGAATGAAGAATGGGATATTCACAGTAGCCAACGGCCATCAATTCGCCAATTTATTGATCTTGCCAAACGCGAACATGA TGCCGCAATGCAAGCCTTAGAACCAGACCCTAACGCTGACCCATTAACCCAGCTTGATCTGCAATGGGCTAAAGAAAGCA TAAAATATACAACATCACAGCGATCACAATTTGGGATTGCAGTCAAACAAAAGCCTCAGCCATTTATGCTGATGGGATTC ACGCTCGTTTTTATTGTAATTACGAGCATACTGGTTGTATTTAAAGTCTATTGTATTAGCTTTTTCTTCTTGCCGTTCAT CATTCTGATGCTGTTTGGTGTGCGGCATCAATTGCGTTTTGCCAAGGCGCAAAAGGATTATTTGGCTAAGCGTACCCAAT TAATTGCCCAATTGGGTTTAAAACCTGAGCAAGTTCCGTTAGCTCCAGTCGTAGAAAAACCGCTGGTTCATCGTACTCCA TTGCTTTCGGCGGAATCGCAAATTCGCCAACTGCAACATCATTATCATGGAATTCACGATCAAGAACAATATCGCCGTTC AGTTAAAAGCATTATTGCCAACGCCCCTGAGCACGAGCGCGATTATCTCAGAGCTTTGGCGGCAATCGAAGCTGAATGGG TTCAAGCGCGACTTAAATATATTCGCTTTGAAAATGGCCGTCGTGAACAAAGAATTCCACAAGCAATGAATCAATGGCTT ATATTGATTGTTTGTGTTGTTTTTGCGGCTGTTGGATTTTTAAGCTATTTCCCATCTGGCAACTGGTTTAACTTGAGTAT TTGGATTGCCATTCCTAGTGTGATTGCAATTGTGGCAATTCAATCAACTAAAAATACCAAAAAATATCGTGAATTAGAGC AATATTACGCCGAAAAACGCAACCAATTGCAAAGCCGCTTTCGCAATCGAACACCTTTCTAA
Upstream 100 bases:
>100_bases TTTTGATCAATAGCGTAACGTTCTTGCCGTGTGATACGTGTATCCAACAAGAACGTTACGCTATTGATTATTTAACCAGT ACAAAAAGCAGAGGTTGATT
Downstream 100 bases:
>100_bases TGCTGGACGCATAAGTTTACAAAATGAATAACGTAACCTTCCTGCTAGGGCAACGTATGAAATAACAGGAAGGTTTTTGT TGTTTAAATGACCGAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MNEEWDIHSSQRPSIRQFIDLAKREHDAAMQALEPDPNADPLTQLDLQWAKESIKYTTSQRSQFGIAVKQKPQPFMLMGF TLVFIVITSILVVFKVYCISFFFLPFIILMLFGVRHQLRFAKAQKDYLAKRTQLIAQLGLKPEQVPLAPVVEKPLVHRTP LLSAESQIRQLQHHYHGIHDQEQYRRSVKSIIANAPEHERDYLRALAAIEAEWVQARLKYIRFENGRREQRIPQAMNQWL ILIVCVVFAAVGFLSYFPSGNWFNLSIWIAIPSVIAIVAIQSTKNTKKYRELEQYYAEKRNQLQSRFRNRTPF
Sequences:
>Translated_313_residues MNEEWDIHSSQRPSIRQFIDLAKREHDAAMQALEPDPNADPLTQLDLQWAKESIKYTTSQRSQFGIAVKQKPQPFMLMGF TLVFIVITSILVVFKVYCISFFFLPFIILMLFGVRHQLRFAKAQKDYLAKRTQLIAQLGLKPEQVPLAPVVEKPLVHRTP LLSAESQIRQLQHHYHGIHDQEQYRRSVKSIIANAPEHERDYLRALAAIEAEWVQARLKYIRFENGRREQRIPQAMNQWL ILIVCVVFAAVGFLSYFPSGNWFNLSIWIAIPSVIAIVAIQSTKNTKKYRELEQYYAEKRNQLQSRFRNRTPF >Mature_313_residues MNEEWDIHSSQRPSIRQFIDLAKREHDAAMQALEPDPNADPLTQLDLQWAKESIKYTTSQRSQFGIAVKQKPQPFMLMGF TLVFIVITSILVVFKVYCISFFFLPFIILMLFGVRHQLRFAKAQKDYLAKRTQLIAQLGLKPEQVPLAPVVEKPLVHRTP LLSAESQIRQLQHHYHGIHDQEQYRRSVKSIIANAPEHERDYLRALAAIEAEWVQARLKYIRFENGRREQRIPQAMNQWL ILIVCVVFAAVGFLSYFPSGNWFNLSIWIAIPSVIAIVAIQSTKNTKKYRELEQYYAEKRNQLQSRFRNRTPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36625; Mature: 36625
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEEWDIHSSQRPSIRQFIDLAKREHDAAMQALEPDPNADPLTQLDLQWAKESIKYTTSQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RSQFGIAVKQKPQPFMLMGFTLVFIVITSILVVFKVYCISFFFLPFIILMLFGVRHQLRF HHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAQKDYLAKRTQLIAQLGLKPEQVPLAPVVEKPLVHRTPLLSAESQIRQLQHHYHGIHD HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCC QEQYRRSVKSIIANAPEHERDYLRALAAIEAEWVQARLKYIRFENGRREQRIPQAMNQWL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ILIVCVVFAAVGFLSYFPSGNWFNLSIWIAIPSVIAIVAIQSTKNTKKYRELEQYYAEKR HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH NQLQSRFRNRTPF HHHHHHHCCCCCC >Mature Secondary Structure MNEEWDIHSSQRPSIRQFIDLAKREHDAAMQALEPDPNADPLTQLDLQWAKESIKYTTSQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RSQFGIAVKQKPQPFMLMGFTLVFIVITSILVVFKVYCISFFFLPFIILMLFGVRHQLRF HHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAQKDYLAKRTQLIAQLGLKPEQVPLAPVVEKPLVHRTPLLSAESQIRQLQHHYHGIHD HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCC QEQYRRSVKSIIANAPEHERDYLRALAAIEAEWVQARLKYIRFENGRREQRIPQAMNQWL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ILIVCVVFAAVGFLSYFPSGNWFNLSIWIAIPSVIAIVAIQSTKNTKKYRELEQYYAEKR HHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH NQLQSRFRNRTPF HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA