| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898311
Identifier: 159898311
GI number: 159898311
Start: 2076917
End: 2078101
Strand: Direct
Name: 159898311
Synonym: Haur_1787
Alternate gene names: NA
Gene position: 2076917-2078101 (Clockwise)
Preceding gene: 159898310
Following gene: 159898312
Centisome position: 32.72
GC content: 49.87
Gene sequence:
>1185_bases ATGGCCTATAATCATCAAGATAAACAAAGTGGGCAGCTTATTCGTGCCGCTGACTGGAACGAAATGAGCCGCGAAGTTGC GCGTTTGGATGAGGCGAAAGTTAACCGAGCTGGCGGTGATACGATTAAAGGGCCGCTCAACGTAACTGCTGGAGCCGATG CAGCTCAAGCTTCGCTCAAAGTTTCGGCGACCACCAATGGCCCGAAGGCTCCGTTGGCTGAATTTCGCCATAGCAACCAA ACCCAAGGCGTGAGCATTGGTTATGCAAGCATTTTGGCCACTGGCTCGAACCCCAACCAACCGCTAGCGATTGCCGCGCG TGGTACCGACCCCCTGACGTTGAATGCCGAAAGTGGCGGCAACGTGGGGATTGGCACGACCAACCCGCAGAATAAATTAC AAGTTGAAGGCAACCTGCACCTGAATGGCAATAGCCTGTATTTGCGCAAAGGCCCAGCTGATCAATTTCATCTGGTACGT TGGCAAGAAACGTCTGATCGGGTGGAGATTGGTGGTTTCAGTGGGGTAACGCTTGGACATACCAGAGATGGCGCAAATGT GATCAAACCAGTTTTGCAGGTTCGGTCTGATCAACAGGTTGAAGTCAGTGGCAGCTTAACTGTTCAACTTGACGCAGCAA CCCGCAATGTGCCAATTTTGCAAGTTCGTCGTTCGGCTGCCGCCCGTGAAGATGGTAAATTTGTCTTCTTAGAATTGTTT CAAGAATATGCGGCAGCGCTAGGCGAGGTATATCCAAGTATTCGCTTTCATCATGGCAATCGCTATTGGCGACGGATTGA GGGCCGTAGTGATGGCTTCCATTTCAAAGATGGTGATATTAATAGCGATGGTTTGACCGGACTTGTGGCTAGTAGTCTGC GTTTTGGTGATGGTACGACCCAAAGCACGGCGGTACGGGTACAAGGTGGCTATGTTGATATTGGCGCTTTTCGCGGTAAT AATCAAGTAAGCCAAGTTCGTCGAGCCATTAGTTATGCAGGATTTACCGAAGCTCCTTCGGTTATTGTAAGTATTGTGGC GATTGATTCAGAGCGTGGCAATAACTTACGTTTTCATGGCTTTGCTGAATCGGTGACCCGTACAGGTTGTACGATTGTCG CTCAGACATGGGCTGATACCATTATCTATGGTTCGTGGGTTTCTTGGATTGCGATTGGGCGTTAG
Upstream 100 bases:
>100_bases CGTGATGTACAACCGCGTGATTTTCGACACGATCACCAAATCCGAGCAATTCAAATTGACATTAATTTGGGAAATTACCT TTTAGCGGGAGTCAGCAGCA
Downstream 100 bases:
>100_bases GAGTTAATCATGCGTCAACAACTTGAACAACGTTTAGCGACATTGAAGGAAGAATTTCAGGCTGGCCAAACCATGCTGGC TGAGCTTGAAACCAAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MAYNHQDKQSGQLIRAADWNEMSREVARLDEAKVNRAGGDTIKGPLNVTAGADAAQASLKVSATTNGPKAPLAEFRHSNQ TQGVSIGYASILATGSNPNQPLAIAARGTDPLTLNAESGGNVGIGTTNPQNKLQVEGNLHLNGNSLYLRKGPADQFHLVR WQETSDRVEIGGFSGVTLGHTRDGANVIKPVLQVRSDQQVEVSGSLTVQLDAATRNVPILQVRRSAAAREDGKFVFLELF QEYAAALGEVYPSIRFHHGNRYWRRIEGRSDGFHFKDGDINSDGLTGLVASSLRFGDGTTQSTAVRVQGGYVDIGAFRGN NQVSQVRRAISYAGFTEAPSVIVSIVAIDSERGNNLRFHGFAESVTRTGCTIVAQTWADTIIYGSWVSWIAIGR
Sequences:
>Translated_394_residues MAYNHQDKQSGQLIRAADWNEMSREVARLDEAKVNRAGGDTIKGPLNVTAGADAAQASLKVSATTNGPKAPLAEFRHSNQ TQGVSIGYASILATGSNPNQPLAIAARGTDPLTLNAESGGNVGIGTTNPQNKLQVEGNLHLNGNSLYLRKGPADQFHLVR WQETSDRVEIGGFSGVTLGHTRDGANVIKPVLQVRSDQQVEVSGSLTVQLDAATRNVPILQVRRSAAAREDGKFVFLELF QEYAAALGEVYPSIRFHHGNRYWRRIEGRSDGFHFKDGDINSDGLTGLVASSLRFGDGTTQSTAVRVQGGYVDIGAFRGN NQVSQVRRAISYAGFTEAPSVIVSIVAIDSERGNNLRFHGFAESVTRTGCTIVAQTWADTIIYGSWVSWIAIGR >Mature_393_residues AYNHQDKQSGQLIRAADWNEMSREVARLDEAKVNRAGGDTIKGPLNVTAGADAAQASLKVSATTNGPKAPLAEFRHSNQT QGVSIGYASILATGSNPNQPLAIAARGTDPLTLNAESGGNVGIGTTNPQNKLQVEGNLHLNGNSLYLRKGPADQFHLVRW QETSDRVEIGGFSGVTLGHTRDGANVIKPVLQVRSDQQVEVSGSLTVQLDAATRNVPILQVRRSAAAREDGKFVFLELFQ EYAAALGEVYPSIRFHHGNRYWRRIEGRSDGFHFKDGDINSDGLTGLVASSLRFGDGTTQSTAVRVQGGYVDIGAFRGNN QVSQVRRAISYAGFTEAPSVIVSIVAIDSERGNNLRFHGFAESVTRTGCTIVAQTWADTIIYGSWVSWIAIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42406; Mature: 42274
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYNHQDKQSGQLIRAADWNEMSREVARLDEAKVNRAGGDTIKGPLNVTAGADAAQASLK CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEE VSATTNGPKAPLAEFRHSNQTQGVSIGYASILATGSNPNQPLAIAARGTDPLTLNAESGG EEECCCCCCCCHHHHHCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEEECCCCC NVGIGTTNPQNKLQVEGNLHLNGNSLYLRKGPADQFHLVRWQETSDRVEIGGFSGVTLGH CEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCEEEEEEECCCCEEEECCCCCEEECC TRDGANVIKPVLQVRSDQQVEVSGSLTVQLDAATRNVPILQVRRSAAAREDGKFVFLELF CCCCHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCCCCEEEHHHHCCCCCCCEEHHHHH QEYAAALGEVYPSIRFHHGNRYWRRIEGRSDGFHFKDGDINSDGLTGLVASSLRFGDGTT HHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCEECCCCCCCCCCHHHHHHHEECCCCCC QSTAVRVQGGYVDIGAFRGNNQVSQVRRAISYAGFTEAPSVIVSIVAIDSERGNNLRFHG CCEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEEEE FAESVTRTGCTIVAQTWADTIIYGSWVSWIAIGR HHHHHHHCCCEEEEEHHHCCEEEECCEEEEEECC >Mature Secondary Structure AYNHQDKQSGQLIRAADWNEMSREVARLDEAKVNRAGGDTIKGPLNVTAGADAAQASLK CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEE VSATTNGPKAPLAEFRHSNQTQGVSIGYASILATGSNPNQPLAIAARGTDPLTLNAESGG EEECCCCCCCCHHHHHCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEEECCCCC NVGIGTTNPQNKLQVEGNLHLNGNSLYLRKGPADQFHLVRWQETSDRVEIGGFSGVTLGH CEECCCCCCCCEEEEEEEEEECCCEEEEECCCCCCEEEEEEECCCCEEEECCCCCEEECC TRDGANVIKPVLQVRSDQQVEVSGSLTVQLDAATRNVPILQVRRSAAAREDGKFVFLELF CCCCHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCCCCEEEHHHHCCCCCCCEEHHHHH QEYAAALGEVYPSIRFHHGNRYWRRIEGRSDGFHFKDGDINSDGLTGLVASSLRFGDGTT HHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCEECCCCCCCCCCHHHHHHHEECCCCCC QSTAVRVQGGYVDIGAFRGNNQVSQVRRAISYAGFTEAPSVIVSIVAIDSERGNNLRFHG CCEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEEEEE FAESVTRTGCTIVAQTWADTIIYGSWVSWIAIGR HHHHHHHCCCEEEEEHHHCCEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA