| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898302
Identifier: 159898302
GI number: 159898302
Start: 2065514
End: 2066089
Strand: Direct
Name: 159898302
Synonym: Haur_1778
Alternate gene names: NA
Gene position: 2065514-2066089 (Clockwise)
Preceding gene: 159898301
Following gene: 159898303
Centisome position: 32.55
GC content: 52.78
Gene sequence:
>576_bases ATGGCGCTTGAGCTAGCAGGGATTGCCTTACAACGGGTGCATCGCATCCAAACGCTCGAACAACGGGCGGCGGTCTATCA CCATGTGCCAGGTATGGCTGGTGATGTGAGCCAACAGCTTGGACGACACTCGGTTTGTTTGCAAATTGAAGGCATCTGTT ATGGAGCCGAAGCCCAAACCATGTTGGAGCAATTGCGCGGCATTTATCTGAAACAAGAGCCAGTCGAGTTTATCGCCGAT ATTGTTGGCCAAGGCTATGTTGCCAAAGTCACGCTTGATCAATTTCAAGTGACCCAACAAGCCTACGAGCCTGATCAATA TAGCTATCGGTTGCAGATTGTCGAATATGCAGCGTCAAGTAAAAGTAAGGTCGCGGCGGCCCAAGTGAACGCCAGCATCA AAACCCAAGCTGTCCAATTGACCACACTTGCCAGCCTGCCCGATGCCTTAGCATTTGGCTCGCTGCCAGAAATCACCAAT CCAGTTGAACCATTGAAAACCGCGCTAGATCCGGTGCGTGAAGCCGCCAGCAGTCTGAGCGATTCGCTGGGAGCGCTGCG CAGCCTGTTGGGCTAG
Upstream 100 bases:
>100_bases TTCAGCGTGAGCAACTGGTGGACGACGTTTTGGCAGCCTTGACCCAAGCCTTGCAACGCGAATATTTGCGTTTTTATAGC GATTAATCAGGAGCGGAGCC
Downstream 100 bases:
>100_bases TGTGTTACGGGGAGATGTATGCAATCGTTGTTGAATGAATTACCGGGCAAAGGCCAATTAACCAGCCTGCTCGATGGGAA ATTTACCCCCAGCGCCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MALELAGIALQRVHRIQTLEQRAAVYHHVPGMAGDVSQQLGRHSVCLQIEGICYGAEAQTMLEQLRGIYLKQEPVEFIAD IVGQGYVAKVTLDQFQVTQQAYEPDQYSYRLQIVEYAASSKSKVAAAQVNASIKTQAVQLTTLASLPDALAFGSLPEITN PVEPLKTALDPVREAASSLSDSLGALRSLLG
Sequences:
>Translated_191_residues MALELAGIALQRVHRIQTLEQRAAVYHHVPGMAGDVSQQLGRHSVCLQIEGICYGAEAQTMLEQLRGIYLKQEPVEFIAD IVGQGYVAKVTLDQFQVTQQAYEPDQYSYRLQIVEYAASSKSKVAAAQVNASIKTQAVQLTTLASLPDALAFGSLPEITN PVEPLKTALDPVREAASSLSDSLGALRSLLG >Mature_190_residues ALELAGIALQRVHRIQTLEQRAAVYHHVPGMAGDVSQQLGRHSVCLQIEGICYGAEAQTMLEQLRGIYLKQEPVEFIADI VGQGYVAKVTLDQFQVTQQAYEPDQYSYRLQIVEYAASSKSKVAAAQVNASIKTQAVQLTTLASLPDALAFGSLPEITNP VEPLKTALDPVREAASSLSDSLGALRSLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20638; Mature: 20507
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALELAGIALQRVHRIQTLEQRAAVYHHVPGMAGDVSQQLGRHSVCLQIEGICYGAEAQT CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCEEECCHHHH MLEQLRGIYLKQEPVEFIADIVGQGYVAKVTLDQFQVTQQAYEPDQYSYRLQIVEYAASS HHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCC KSKVAAAQVNASIKTQAVQLTTLASLPDALAFGSLPEITNPVEPLKTALDPVREAASSLS CHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DSLGALRSLLG HHHHHHHHHHC >Mature Secondary Structure ALELAGIALQRVHRIQTLEQRAAVYHHVPGMAGDVSQQLGRHSVCLQIEGICYGAEAQT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCEEECCHHHH MLEQLRGIYLKQEPVEFIADIVGQGYVAKVTLDQFQVTQQAYEPDQYSYRLQIVEYAASS HHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCC KSKVAAAQVNASIKTQAVQLTTLASLPDALAFGSLPEITNPVEPLKTALDPVREAASSLS CHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DSLGALRSLLG HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA