| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898301
Identifier: 159898301
GI number: 159898301
Start: 2064207
End: 2065499
Strand: Direct
Name: 159898301
Synonym: Haur_1777
Alternate gene names: NA
Gene position: 2064207-2065499 (Clockwise)
Preceding gene: 159898300
Following gene: 159898302
Centisome position: 32.52
GC content: 54.37
Gene sequence:
>1293_bases GTGAATAAGCCCGAATCAAGCTTAATAACTCTTGGCACGGCGATTCAGGCCGATTTTAGCGCTTGGCTGGATGGCTTAAC GAGCTGGTTGCCAAGCGAGCAACCTGCCAGCATTTTGGCTGACGATTGGCAAACTGAGCTGGCCTTGGCGGCCCAATTGC AACAACTCAGTGCTTGGGCTGATGGTTTGAGCAGCGGTCTGGTTCCGCAATTAATTGTTGGTCAACCGCGCAACCAGACC CAGGTTGCTGAGCCTGAACCAACCAATCTGGCTGCTTGGCAACCTGCGTTGGTTGAAAATAATATGCCTGCTAGGCCGTC ATCCGATCTGTTTCAGCCGCCAGTTTCAGCCATGTCCAGCCAAACCCAAGCCACAAAAGTTGTGGTTCGGCCTGAGCTGC ATGGCACTCGGCAGGTGTTGGCTGCCGCGCCATTGCGCAAAGTTGTGCCGTTGCAAGCAGGGCTGGCCGATCACGCTGCA ACCAACCAACTCGATCGTGGTTTGCCTGAGGTTGTACCTAGCAGTACCAACTTGGATGTTGCGCCAAACCTAGTAGTACA GCAAGCAGCCACCCAACCATCAAGCCCAGCGCTTGCGCCGATCACCAACCAAACATTGCCAATCCAAACCAGCCCAATCA AAGGGCTAGCCGATTTTGCCCAGTTGTGGCAGGGCGCGGACCACGCTGAAACGGCCTGGTTGGCTGAGGTTGCTCAACCT CAGGCGTTTGAGCCAGCTTTGCCTAGTCAAGCGCTGCCACAAGCTGTAGCTAACCAAAGCGTCGAGCCAGTTCAGCCGTC GTTGCCAAGCCAATCAGGTGGGCAAGCTACAAGTAACAGTACGGCCTCAGCTTGGCAGCAGGCGGCAACAACTCAAAGCT TCAATCAACCAAATAGCCCAAATCAGGCTGCTGACCAACCTGAGGCGACGCTTAGAAACTTTAATCTGGCTGAAATCGCC AACGCTCAGAGGACATGGATTACGCCAGCGCTTGGCAACCAAGCAGCGGCCAGCGCAACCCACTACAACATTCCAGCGCC AAACATTCATCCAACTAAGCCAGCCTTGGAATTGCCAGCTACTCCAGCCTCGCCACCAAACCAGCTGACAATTGCCAATC CGACCCAAACGCCAAGCGACCAACCACCGCCGATTGAAGCGATCCAGCAAGCGGTTGCTTCGCAAACTCCCAATCAAGCT ACTGAAATTCAGCGTGAGCAACTGGTGGACGACGTTTTGGCAGCCTTGACCCAAGCCTTGCAACGCGAATATTTGCGTTT TTATAGCGATTAA
Upstream 100 bases:
>100_bases CGGCTTGCTAAGGCCTTTGGCTGGACACCGCAGGAAGTGCAGGCCTTGACTATGGCTCAAATTACGCTGTATTTGCAATT ATTAGCCGAGGATGTTGGCA
Downstream 100 bases:
>100_bases TCAGGAGCGGAGCCATGGCGCTTGAGCTAGCAGGGATTGCCTTACAACGGGTGCATCGCATCCAAACGCTCGAACAACGG GCGGCGGTCTATCACCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MNKPESSLITLGTAIQADFSAWLDGLTSWLPSEQPASILADDWQTELALAAQLQQLSAWADGLSSGLVPQLIVGQPRNQT QVAEPEPTNLAAWQPALVENNMPARPSSDLFQPPVSAMSSQTQATKVVVRPELHGTRQVLAAAPLRKVVPLQAGLADHAA TNQLDRGLPEVVPSSTNLDVAPNLVVQQAATQPSSPALAPITNQTLPIQTSPIKGLADFAQLWQGADHAETAWLAEVAQP QAFEPALPSQALPQAVANQSVEPVQPSLPSQSGGQATSNSTASAWQQAATTQSFNQPNSPNQAADQPEATLRNFNLAEIA NAQRTWITPALGNQAAASATHYNIPAPNIHPTKPALELPATPASPPNQLTIANPTQTPSDQPPPIEAIQQAVASQTPNQA TEIQREQLVDDVLAALTQALQREYLRFYSD
Sequences:
>Translated_430_residues MNKPESSLITLGTAIQADFSAWLDGLTSWLPSEQPASILADDWQTELALAAQLQQLSAWADGLSSGLVPQLIVGQPRNQT QVAEPEPTNLAAWQPALVENNMPARPSSDLFQPPVSAMSSQTQATKVVVRPELHGTRQVLAAAPLRKVVPLQAGLADHAA TNQLDRGLPEVVPSSTNLDVAPNLVVQQAATQPSSPALAPITNQTLPIQTSPIKGLADFAQLWQGADHAETAWLAEVAQP QAFEPALPSQALPQAVANQSVEPVQPSLPSQSGGQATSNSTASAWQQAATTQSFNQPNSPNQAADQPEATLRNFNLAEIA NAQRTWITPALGNQAAASATHYNIPAPNIHPTKPALELPATPASPPNQLTIANPTQTPSDQPPPIEAIQQAVASQTPNQA TEIQREQLVDDVLAALTQALQREYLRFYSD >Mature_430_residues MNKPESSLITLGTAIQADFSAWLDGLTSWLPSEQPASILADDWQTELALAAQLQQLSAWADGLSSGLVPQLIVGQPRNQT QVAEPEPTNLAAWQPALVENNMPARPSSDLFQPPVSAMSSQTQATKVVVRPELHGTRQVLAAAPLRKVVPLQAGLADHAA TNQLDRGLPEVVPSSTNLDVAPNLVVQQAATQPSSPALAPITNQTLPIQTSPIKGLADFAQLWQGADHAETAWLAEVAQP QAFEPALPSQALPQAVANQSVEPVQPSLPSQSGGQATSNSTASAWQQAATTQSFNQPNSPNQAADQPEATLRNFNLAEIA NAQRTWITPALGNQAAASATHYNIPAPNIHPTKPALELPATPASPPNQLTIANPTQTPSDQPPPIEAIQQAVASQTPNQA TEIQREQLVDDVLAALTQALQREYLRFYSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45566; Mature: 45566
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPESSLITLGTAIQADFSAWLDGLTSWLPSEQPASILADDWQTELALAAQLQQLSAWA CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DGLSSGLVPQLIVGQPRNQTQVAEPEPTNLAAWQPALVENNMPARPSSDLFQPPVSAMSS HHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCHHHHHC QTQATKVVVRPELHGTRQVLAAAPLRKVVPLQAGLADHAATNQLDRGLPEVVPSSTNLDV CHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHCCCCCCCCC APNLVVQQAATQPSSPALAPITNQTLPIQTSPIKGLADFAQLWQGADHAETAWLAEVAQP CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC QAFEPALPSQALPQAVANQSVEPVQPSLPSQSGGQATSNSTASAWQQAATTQSFNQPNSP CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC NQAADQPEATLRNFNLAEIANAQRTWITPALGNQAAASATHYNIPAPNIHPTKPALELPA CCCCCCCHHHHHCCCHHHHHCCCHHEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC TPASPPNQLTIANPTQTPSDQPPPIEAIQQAVASQTPNQATEIQREQLVDDVLAALTQAL CCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QREYLRFYSD HHHHHHHHCC >Mature Secondary Structure MNKPESSLITLGTAIQADFSAWLDGLTSWLPSEQPASILADDWQTELALAAQLQQLSAWA CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DGLSSGLVPQLIVGQPRNQTQVAEPEPTNLAAWQPALVENNMPARPSSDLFQPPVSAMSS HHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCHHHHHC QTQATKVVVRPELHGTRQVLAAAPLRKVVPLQAGLADHAATNQLDRGLPEVVPSSTNLDV CHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHCCCCCCCCC APNLVVQQAATQPSSPALAPITNQTLPIQTSPIKGLADFAQLWQGADHAETAWLAEVAQP CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC QAFEPALPSQALPQAVANQSVEPVQPSLPSQSGGQATSNSTASAWQQAATTQSFNQPNSP CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC NQAADQPEATLRNFNLAEIANAQRTWITPALGNQAAASATHYNIPAPNIHPTKPALELPA CCCCCCCHHHHHCCCHHHHHCCCHHEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC TPASPPNQLTIANPTQTPSDQPPPIEAIQQAVASQTPNQATEIQREQLVDDVLAALTQAL CCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QREYLRFYSD HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA