| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898297
Identifier: 159898297
GI number: 159898297
Start: 2062113
End: 2063195
Strand: Direct
Name: 159898297
Synonym: Haur_1773
Alternate gene names: NA
Gene position: 2062113-2063195 (Clockwise)
Preceding gene: 159898296
Following gene: 159898298
Centisome position: 32.49
GC content: 50.78
Gene sequence:
>1083_bases ATGGCTGAAGTGATTTTGCCAGGCACCTACATCACGGTGCGTGATGAGGGGCTGATTAGCGCAGGGCGCATCGCCTCGGG CTATATTGGCATTGTTGGCACGGCAGCAAGTGGTCCAATCAATCAAGTGCAAATTTTGGGCAGTTTCAGCGAAGCGAAGG CGATTTTCGGAGTCAGCGATGCTTGGCAAGGCGGCACAAAAAACGAGTTAACCCTCATTCGGGCCTTGGAACAGATTTAT AACAACGGCGGCAAAACGGTCTATGCAGTGCGCAGCGAAGGCGTAACAGTTGATAATTATAAAACTGCCCTCGCTGAATT GGAAAATGAAATCGTTAATTTGGTGTTATTGGCTGGTCAAGATAGCTCAAATGTGGGCATGGCCAATGCTTTAATCGCGC ACCTCACCACCACCGCAGGCATCAAACGCGAACGCATCGGCTTGATCGGTAGTGCGCTTGGCGATGATATCGCTAAAATC TCTGGTCATAGCTATGCCAGCGATCGCTTAATTTTCGTCGCACCTGGGATCAAAAGCTCAGTCAGCGATCCAGCGACCCA AACCGTCAGTCAAGTTTCCTTGCCTGGTAGTTATTTGGCCGCTGCGGTGGCTGGCTTGATCGCCGCCTTACCAGTGCAAT CCAGCCCAACCAACAAAACTGTGGCAATTGAAGGTTTGACCACCAACTTTAGCGCCTCGCAACTTGAACAATTGGTGCAA AAACGGGTGCTCGTGGTCGAAAAACGCGAAGGCTGGCGGGTGGTCAAAGGCATTACCACCGCCACCAACTCGGCTTGGCA TCAAATTACCACCCGCCGTATCGTTGATTATGCAATTTATGGCGTGCGCTCAGCTTGTAATCCCTACATCGGCAAACTGA ATAACGACCGAGTACGCGGCGCAATGAAAGCGACGCTTGATGCCTTTTTGACCCGTATGGTCGAAGATGAGGCCTTGGTT GGCTATTCGTTGGATGTTTCAGCCACTCGCGCTCAGCAAATTGCTGGCGAAGTGCAAGTGTCGCTCACGTTGCAACCAAC CTTCAGTATCGATTTCATCTTAGTAACGATGTATTTGGGTTAG
Upstream 100 bases:
>100_bases TCCTACTTTCCACCCGATCGCTCAAAAGAGTTCAAATTCGTTTATGGCAACGTAATGCTGTAAATGCTTCTTTGGTGTGC GTATTGTTTAGGGAGGTATT
Downstream 100 bases:
>100_bases GAGCAAACTCATGCCAAATGTCAATGTTTTTCGTGGCTCAGATGCGTCGTTGGTGCTGGCGGTTGATGATAGCAGCACTG CCGAAGGTGGTTTGGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MAEVILPGTYITVRDEGLISAGRIASGYIGIVGTAASGPINQVQILGSFSEAKAIFGVSDAWQGGTKNELTLIRALEQIY NNGGKTVYAVRSEGVTVDNYKTALAELENEIVNLVLLAGQDSSNVGMANALIAHLTTTAGIKRERIGLIGSALGDDIAKI SGHSYASDRLIFVAPGIKSSVSDPATQTVSQVSLPGSYLAAAVAGLIAALPVQSSPTNKTVAIEGLTTNFSASQLEQLVQ KRVLVVEKREGWRVVKGITTATNSAWHQITTRRIVDYAIYGVRSACNPYIGKLNNDRVRGAMKATLDAFLTRMVEDEALV GYSLDVSATRAQQIAGEVQVSLTLQPTFSIDFILVTMYLG
Sequences:
>Translated_360_residues MAEVILPGTYITVRDEGLISAGRIASGYIGIVGTAASGPINQVQILGSFSEAKAIFGVSDAWQGGTKNELTLIRALEQIY NNGGKTVYAVRSEGVTVDNYKTALAELENEIVNLVLLAGQDSSNVGMANALIAHLTTTAGIKRERIGLIGSALGDDIAKI SGHSYASDRLIFVAPGIKSSVSDPATQTVSQVSLPGSYLAAAVAGLIAALPVQSSPTNKTVAIEGLTTNFSASQLEQLVQ KRVLVVEKREGWRVVKGITTATNSAWHQITTRRIVDYAIYGVRSACNPYIGKLNNDRVRGAMKATLDAFLTRMVEDEALV GYSLDVSATRAQQIAGEVQVSLTLQPTFSIDFILVTMYLG >Mature_359_residues AEVILPGTYITVRDEGLISAGRIASGYIGIVGTAASGPINQVQILGSFSEAKAIFGVSDAWQGGTKNELTLIRALEQIYN NGGKTVYAVRSEGVTVDNYKTALAELENEIVNLVLLAGQDSSNVGMANALIAHLTTTAGIKRERIGLIGSALGDDIAKIS GHSYASDRLIFVAPGIKSSVSDPATQTVSQVSLPGSYLAAAVAGLIAALPVQSSPTNKTVAIEGLTTNFSASQLEQLVQK RVLVVEKREGWRVVKGITTATNSAWHQITTRRIVDYAIYGVRSACNPYIGKLNNDRVRGAMKATLDAFLTRMVEDEALVG YSLDVSATRAQQIAGEVQVSLTLQPTFSIDFILVTMYLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38152; Mature: 38021
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVILPGTYITVRDEGLISAGRIASGYIGIVGTAASGPINQVQILGSFSEAKAIFGVSD CCCEEECCEEEEEECCCCEECCCCCCCCEEEEEECCCCCCCEEEEEECHHHHHEEECCCC AWQGGTKNELTLIRALEQIYNNGGKTVYAVRSEGVTVDNYKTALAELENEIVNLVLLAGQ CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHHHHHHHEEEEEEECC DSSNVGMANALIAHLTTTAGIKRERIGLIGSALGDDIAKISGHSYASDRLIFVAPGIKSS CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCCCCC VSDPATQTVSQVSLPGSYLAAAVAGLIAALPVQSSPTNKTVAIEGLTTNFSASQLEQLVQ CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH KRVLVVEKREGWRVVKGITTATNSAWHQITTRRIVDYAIYGVRSACNPYIGKLNNDRVRG HHEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHH AMKATLDAFLTRMVEDEALVGYSLDVSATRAQQIAGEVQVSLTLQPTFSIDFILVTMYLG HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCEEEEEEEECCCCCEEEEEEEEECC >Mature Secondary Structure AEVILPGTYITVRDEGLISAGRIASGYIGIVGTAASGPINQVQILGSFSEAKAIFGVSD CCEEECCEEEEEECCCCEECCCCCCCCEEEEEECCCCCCCEEEEEECHHHHHEEECCCC AWQGGTKNELTLIRALEQIYNNGGKTVYAVRSEGVTVDNYKTALAELENEIVNLVLLAGQ CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHHHHHHHEEEEEEECC DSSNVGMANALIAHLTTTAGIKRERIGLIGSALGDDIAKISGHSYASDRLIFVAPGIKSS CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCCCCC VSDPATQTVSQVSLPGSYLAAAVAGLIAALPVQSSPTNKTVAIEGLTTNFSASQLEQLVQ CCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH KRVLVVEKREGWRVVKGITTATNSAWHQITTRRIVDYAIYGVRSACNPYIGKLNNDRVRG HHEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHH AMKATLDAFLTRMVEDEALVGYSLDVSATRAQQIAGEVQVSLTLQPTFSIDFILVTMYLG HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCEEEEEEEECCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA