| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898289
Identifier: 159898289
GI number: 159898289
Start: 2053338
End: 2053967
Strand: Direct
Name: 159898289
Synonym: Haur_1765
Alternate gene names: NA
Gene position: 2053338-2053967 (Clockwise)
Preceding gene: 159898287
Following gene: 159898292
Centisome position: 32.35
GC content: 50.0
Gene sequence:
>630_bases ATGTTAATTGGTGTTTTAGGGGCTGGGCGGGTTGGCCAAATGTTTTGCGAATTGTTGGTTGAGCGTGGGCATCAAGTATT GCTAGCCAACTCGCGTGGCCCAGCCTCGCTGCAAATGCTGGTTGAGCAACTTGGCCCGCAGGTTATGGCGGTTGAACCAG CCGCGTTGCAACAGACCGAACTGATCATCTTGGTCGTGCGTTGGCAGCATATTCCCACTGCCTTAGAGCCATTGGCTGAT TACAATGGGATTGTTATTGACGTAATCAATAACCGTTTTGGACCGAATCCAAGCGATTTTTACGATTTAGATGGACGTGG CTCAAGTGAAATTGTGGCTGAATTATTGCCGCAAGCTCGTTTCGTTAAAGCCTTCAATCATCAGCCATTTGCTGATTTGG CCCATTTGAGTGAGCCGCCAACCCCCAAAGCCTTATTTGTGGCGGGCAACGATCAAGCGGCTAAGCGCGTTGTGATTGGA TTGATTGAAGCATTGGGGGCAACCGCCATGGATTTAGGTAATTTGATCGATGGCGGGCGTTTATTCTCGACCGGAATCGG GCCATTAGCTGGCCATGGGCGAGTATTGACTGTGGCTGAAGCACAGGCGATTTTAGCTCAAACAGCCTAA
Upstream 100 bases:
>100_bases TGTGCCAATGGACAGGCTCATACTCCATCTATGTGGTGATCGATTGTGTTACAGGCCACGCTATAGTTGTTGCAGTAATT GTGTTTGGCTGGAGGCAACA
Downstream 100 bases:
>100_bases TTAGGGTTTGTCCATCCTCATAACTAGGTTTGTTGAGAACCAAAAGCCAGAGGATGGACAACCATACTAGCGCTAGTCAC ATTCCACTACCACCGCCATC
Product: NADP oxidoreductase coenzyme F420-dependent
Products: NA
Alternate protein names: Oxidoreductase; 2-Dehydropantoate 2-Reductase; Polyketide Synthase
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MLIGVLGAGRVGQMFCELLVERGHQVLLANSRGPASLQMLVEQLGPQVMAVEPAALQQTELIILVVRWQHIPTALEPLAD YNGIVIDVINNRFGPNPSDFYDLDGRGSSEIVAELLPQARFVKAFNHQPFADLAHLSEPPTPKALFVAGNDQAAKRVVIG LIEALGATAMDLGNLIDGGRLFSTGIGPLAGHGRVLTVAEAQAILAQTA
Sequences:
>Translated_209_residues MLIGVLGAGRVGQMFCELLVERGHQVLLANSRGPASLQMLVEQLGPQVMAVEPAALQQTELIILVVRWQHIPTALEPLAD YNGIVIDVINNRFGPNPSDFYDLDGRGSSEIVAELLPQARFVKAFNHQPFADLAHLSEPPTPKALFVAGNDQAAKRVVIG LIEALGATAMDLGNLIDGGRLFSTGIGPLAGHGRVLTVAEAQAILAQTA >Mature_209_residues MLIGVLGAGRVGQMFCELLVERGHQVLLANSRGPASLQMLVEQLGPQVMAVEPAALQQTELIILVVRWQHIPTALEPLAD YNGIVIDVINNRFGPNPSDFYDLDGRGSSEIVAELLPQARFVKAFNHQPFADLAHLSEPPTPKALFVAGNDQAAKRVVIG LIEALGATAMDLGNLIDGGRLFSTGIGPLAGHGRVLTVAEAQAILAQTA
Specific function: Unknown
COG id: COG2085
COG function: function code R; Predicted dinucleotide-binding enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22184; Mature: 22184
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGVLGAGRVGQMFCELLVERGHQVLLANSRGPASLQMLVEQLGPQVMAVEPAALQQTE CEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCHHHCCCE LIILVVRWQHIPTALEPLADYNGIVIDVINNRFGPNPSDFYDLDGRGSSEIVAELLPQAR EEEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEECCCCCHHHHHHHHCCHHH FVKAFNHQPFADLAHLSEPPTPKALFVAGNDQAAKRVVIGLIEALGATAMDLGNLIDGGR HHHHHCCCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCE LFSTGIGPLAGHGRVLTVAEAQAILAQTA EEECCCCCCCCCCEEEEEHHHHHHHHCCC >Mature Secondary Structure MLIGVLGAGRVGQMFCELLVERGHQVLLANSRGPASLQMLVEQLGPQVMAVEPAALQQTE CEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCHHHCCCE LIILVVRWQHIPTALEPLADYNGIVIDVINNRFGPNPSDFYDLDGRGSSEIVAELLPQAR EEEEEEECCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEECCCCCHHHHHHHHCCHHH FVKAFNHQPFADLAHLSEPPTPKALFVAGNDQAAKRVVIGLIEALGATAMDLGNLIDGGR HHHHHCCCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCE LFSTGIGPLAGHGRVLTVAEAQAILAQTA EEECCCCCCCCCCEEEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA