| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is crtP [H]
Identifier: 159898235
GI number: 159898235
Start: 1990535
End: 1992040
Strand: Direct
Name: crtP [H]
Synonym: Haur_1711
Alternate gene names: 159898235
Gene position: 1990535-1992040 (Clockwise)
Preceding gene: 159898234
Following gene: 159898237
Centisome position: 31.36
GC content: 53.59
Gene sequence:
>1506_bases ATGGATTATGATCTGATTGTAATTGGTGCAGGCATTGCGGGCTTGTCTGCTGCCGCCCTCTTGGCCAAGGATGGCTACCG AGTTTTAGTGCTAGAGGCGCATATCGAGCCTGGTGGCTGTGCTTCTTCCTATCAACGCAAACGCCCCAATGGCGAACACT ATATTTTTGATGTTGGCGCAACTGTCTTTGCGGGCTTTCGGCCTGGCGGTGCGCATTATTGGCTTGGGCAAAAATTAGGC TTAACTTGGCCAATTCGCCCGGTCAATCCAGCGATGCAAGTTTGGTTGCCCGATCTGCGGGTGACCCGTTGGGGTGATGA GCGCTGGATCGCCGAACGTCAGCGGTTGTGCCTAAGCCAAGCATGGGAAGCTGAGCAATTTTGGCGTGAGCAAGAGCATT TGGCCGAGGTCGCTTGGCGCTTTGCTGGTCGGATGCCGGCGATGCCGCCCGAATCATTGGCCGATCTTGGTCAGTTGATA ACCCGAATTCGGCCTGAGATGCTTGGTTTATTGCCAGCCTTGCCGCGCACGGTCAAGCATGCGCTCAATCGACATAAGGT GGATGATCGACGAATTCGCACCTTTATTGATGGTCAATTGTTGATTAGCGCCCAAAGTAGCCATGCCGAATGTGCTTGGC TCTACGGAGCAGTGGCGCTCGATTTGGCGCGAATTGGTACCTATTATGTTGAGGGTGGCGCATGGAATTTGGCCAAAACC CTCGAACAAGCCTTACTCAAGGCTGGCGGCGAAATTCGCTATCGCCAAAAAGTAAGCCAAATTCAGACCGATCTGGGGCA AGTGGTTGGGGTAACCACTGAGCAGGGCGAGCGTTTTCGCACAAAGCAGGTTATTGCTAACACGACGGTTTGGGATTTAG CTGAGCTAATCGATCAGCCGCCAAGTTGGATGCTCCGCCGAACGATCAAGGCTGTACCACAAGGTTGGGGTGCGGCAACG CTCTATCTGGGCATCGACGAAGCCGCAATTCCCCAAGGCTTAGCTGAGCATCATCAAATTATTGCCAACTATGATCAAGC GCTTGGCGAGGCCAATAGTGTGTTTATTTCATTGCATCCGGCTGATGATGCTTCGCGTGCGCCAGCTGGCCAACGAGCAA TGACCGTTTCGACCCATACCGATGTTGGGCGCTGGTGGCATTGGCGGCAAACTGACCCAGCTCGCTATCGGGCTGAAAAA ATAGCGATGGCTGAGCGCATGCTCGATACTGTGGCGTTAGCAATGCCATCCATTCGCCAACATATTCGTTATCAACAAAT TGGTACGCCCGTTTCGTTTGCCCGCTATACTCAGCGCAAACGTGGTATGGTTGGCGGCTTGCCACAATGGCGTTCGGTTT CGGGCTTGCTTAGTTTGGGGCCACAAGCGGCACGCATTAACGGCTTGTGGTTGGTCGGCGATAGCACGTTTCCTGGGCAA AGCACCGCTGCCGTGACCCAAAGCGCGATTCAAGTTTATCAGAAAATTCGCCGTGCAGATCGTTAA
Upstream 100 bases:
>100_bases TGTACGGATTTTGCGCGGCGAAGCGATTTGGGACATTTATTAAACCAAGCGCTGGTTCCCCACGTAGCATAGCCTGTTCG ATCTAGGTGGGGAATTGGCG
Downstream 100 bases:
>100_bases TCGAAATTAGGGGATTTTATCCCCTGCAGATCCTAATAGTTGTTTTGTGGATTGTTCGATTATTGTTCATTTTCCAGCTT CGTGAGCTTTGCGCTCCTCG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MDYDLIVIGAGIAGLSAAALLAKDGYRVLVLEAHIEPGGCASSYQRKRPNGEHYIFDVGATVFAGFRPGGAHYWLGQKLG LTWPIRPVNPAMQVWLPDLRVTRWGDERWIAERQRLCLSQAWEAEQFWREQEHLAEVAWRFAGRMPAMPPESLADLGQLI TRIRPEMLGLLPALPRTVKHALNRHKVDDRRIRTFIDGQLLISAQSSHAECAWLYGAVALDLARIGTYYVEGGAWNLAKT LEQALLKAGGEIRYRQKVSQIQTDLGQVVGVTTEQGERFRTKQVIANTTVWDLAELIDQPPSWMLRRTIKAVPQGWGAAT LYLGIDEAAIPQGLAEHHQIIANYDQALGEANSVFISLHPADDASRAPAGQRAMTVSTHTDVGRWWHWRQTDPARYRAEK IAMAERMLDTVALAMPSIRQHIRYQQIGTPVSFARYTQRKRGMVGGLPQWRSVSGLLSLGPQAARINGLWLVGDSTFPGQ STAAVTQSAIQVYQKIRRADR
Sequences:
>Translated_501_residues MDYDLIVIGAGIAGLSAAALLAKDGYRVLVLEAHIEPGGCASSYQRKRPNGEHYIFDVGATVFAGFRPGGAHYWLGQKLG LTWPIRPVNPAMQVWLPDLRVTRWGDERWIAERQRLCLSQAWEAEQFWREQEHLAEVAWRFAGRMPAMPPESLADLGQLI TRIRPEMLGLLPALPRTVKHALNRHKVDDRRIRTFIDGQLLISAQSSHAECAWLYGAVALDLARIGTYYVEGGAWNLAKT LEQALLKAGGEIRYRQKVSQIQTDLGQVVGVTTEQGERFRTKQVIANTTVWDLAELIDQPPSWMLRRTIKAVPQGWGAAT LYLGIDEAAIPQGLAEHHQIIANYDQALGEANSVFISLHPADDASRAPAGQRAMTVSTHTDVGRWWHWRQTDPARYRAEK IAMAERMLDTVALAMPSIRQHIRYQQIGTPVSFARYTQRKRGMVGGLPQWRSVSGLLSLGPQAARINGLWLVGDSTFPGQ STAAVTQSAIQVYQKIRRADR >Mature_501_residues MDYDLIVIGAGIAGLSAAALLAKDGYRVLVLEAHIEPGGCASSYQRKRPNGEHYIFDVGATVFAGFRPGGAHYWLGQKLG LTWPIRPVNPAMQVWLPDLRVTRWGDERWIAERQRLCLSQAWEAEQFWREQEHLAEVAWRFAGRMPAMPPESLADLGQLI TRIRPEMLGLLPALPRTVKHALNRHKVDDRRIRTFIDGQLLISAQSSHAECAWLYGAVALDLARIGTYYVEGGAWNLAKT LEQALLKAGGEIRYRQKVSQIQTDLGQVVGVTTEQGERFRTKQVIANTTVWDLAELIDQPPSWMLRRTIKAVPQGWGAAT LYLGIDEAAIPQGLAEHHQIIANYDQALGEANSVFISLHPADDASRAPAGQRAMTVSTHTDVGRWWHWRQTDPARYRAEK IAMAERMLDTVALAMPSIRQHIRYQQIGTPVSFARYTQRKRGMVGGLPQWRSVSGLLSLGPQAARINGLWLVGDSTFPGQ STAAVTQSAIQVYQKIRRADR
Specific function: Catalyzes the oxidation of the terminal methyl side group of 4,4'-diaponeurosporene to form 4,4'-diaponeurosporenoate (4,4'-diaponeurosporenic acid), via the aldehyde intermediate 4,4'-diaponeurosporenal. This is an intermediate step in the biosynthesis o
COG id: COG1233
COG function: function code Q; Phytoene dehydrogenase and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carotenoid/retinoid oxidoreductase family. CrtP subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002937 - InterPro: IPR014105 [H]
Pfam domain/function: PF01593 Amino_oxidase [H]
EC number: NA
Molecular weight: Translated: 55941; Mature: 55941
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYDLIVIGAGIAGLSAAALLAKDGYRVLVLEAHIEPGGCASSYQRKRPNGEHYIFDVGA CCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHCCCCCCEEEEECCH TVFAGFRPGGAHYWLGQKLGLTWPIRPVNPAMQVWLPDLRVTRWGDERWIAERQRLCLSQ HHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH AWEAEQFWREQEHLAEVAWRFAGRMPAMPPESLADLGQLITRIRPEMLGLLPALPRTVKH CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH ALNRHKVDDRRIRTFIDGQLLISAQSSHAECAWLYGAVALDLARIGTYYVEGGAWNLAKT HHHHCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH LEQALLKAGGEIRYRQKVSQIQTDLGQVVGVTTEQGERFRTKQVIANTTVWDLAELIDQP HHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCHHHHHHHHHCCC PSWMLRRTIKAVPQGWGAATLYLGIDEAAIPQGLAEHHQIIANYDQALGEANSVFISLHP HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC ADDASRAPAGQRAMTVSTHTDVGRWWHWRQTDPARYRAEKIAMAERMLDTVALAMPSIRQ CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HIRYQQIGTPVSFARYTQRKRGMVGGLPQWRSVSGLLSLGPQAARINGLWLVGDSTFPGQ HHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCC STAAVTQSAIQVYQKIRRADR CHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDYDLIVIGAGIAGLSAAALLAKDGYRVLVLEAHIEPGGCASSYQRKRPNGEHYIFDVGA CCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHCCCCCCEEEEECCH TVFAGFRPGGAHYWLGQKLGLTWPIRPVNPAMQVWLPDLRVTRWGDERWIAERQRLCLSQ HHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH AWEAEQFWREQEHLAEVAWRFAGRMPAMPPESLADLGQLITRIRPEMLGLLPALPRTVKH CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH ALNRHKVDDRRIRTFIDGQLLISAQSSHAECAWLYGAVALDLARIGTYYVEGGAWNLAKT HHHHCCCCHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEECCCCHHHHH LEQALLKAGGEIRYRQKVSQIQTDLGQVVGVTTEQGERFRTKQVIANTTVWDLAELIDQP HHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCHHHHHHHHHCCC PSWMLRRTIKAVPQGWGAATLYLGIDEAAIPQGLAEHHQIIANYDQALGEANSVFISLHP HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC ADDASRAPAGQRAMTVSTHTDVGRWWHWRQTDPARYRAEKIAMAERMLDTVALAMPSIRQ CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HIRYQQIGTPVSFARYTQRKRGMVGGLPQWRSVSGLLSLGPQAARINGLWLVGDSTFPGQ HHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCC STAAVTQSAIQVYQKIRRADR CHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA