Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898213

Identifier: 159898213

GI number: 159898213

Start: 1963383

End: 1963931

Strand: Direct

Name: 159898213

Synonym: Haur_1689

Alternate gene names: NA

Gene position: 1963383-1963931 (Clockwise)

Preceding gene: 159898212

Following gene: 159898216

Centisome position: 30.94

GC content: 49.54

Gene sequence:

>549_bases
ATGGCAACAATTCTGCAAATTCCCTCGCTGCGCGATCAACAAAGCCGTGAAGTTAAGCGTTTGCTGATGAAGCATTTACG
CAGCTTCAGCGATACGCTTGAAGTTAATGATGTTGCCCATGTGCCGTTGTATCAACAATTAGCAGTCAATATTGTCTGGA
AAGTGCGCATGCCTCCCTGTTCCAAGCGCAGCATCCGAATTGCCTTCTACTATGATGAAATTGGCAACGATCAACAGCTT
TTTATTCCAACTTGGCAAGCCGACCCCGACCCCGCCAGTCGTTTGAGCATTACGGCGGCTGAATATTGGTATAGCTATGT
TGCCGCTACCAGCAAAGTGTATGTTTTGCCCGTGGCCCAACTACGGCCATGGTTCGCTCAACAGAGCCAGCATTTAGCAG
CTCATGAAGTTATCCAACAACTGCCCGAACAACCAGCCTCGATTCAAGCGATTGGGCGGTTTGTGCCAACCCAACGGTTG
TTACGCGAACTGGACGAACTTGAGATTTGGCCACTTAATCGTTTGCAGCCGAGCAAACGGGTTGCGTAG

Upstream 100 bases:

>100_bases
CCTTTTTTAATATTAACTGAACATATGTGCTTGACATAGAAATTTTGTTCTGGTATAGTCAAAATGGGTTACTGAAGCAA
CTACGAAATGAGGCATTCTA

Downstream 100 bases:

>100_bases
CTCGGCTGCAATTGGCAATAATTAACCTAATTTGGCAACTTGATCTTGAATTTGCACAATTGCTGCATCGCGTAAGCCTT
GGGCGATGCCACGATCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MATILQIPSLRDQQSREVKRLLMKHLRSFSDTLEVNDVAHVPLYQQLAVNIVWKVRMPPCSKRSIRIAFYYDEIGNDQQL
FIPTWQADPDPASRLSITAAEYWYSYVAATSKVYVLPVAQLRPWFAQQSQHLAAHEVIQQLPEQPASIQAIGRFVPTQRL
LRELDELEIWPLNRLQPSKRVA

Sequences:

>Translated_182_residues
MATILQIPSLRDQQSREVKRLLMKHLRSFSDTLEVNDVAHVPLYQQLAVNIVWKVRMPPCSKRSIRIAFYYDEIGNDQQL
FIPTWQADPDPASRLSITAAEYWYSYVAATSKVYVLPVAQLRPWFAQQSQHLAAHEVIQQLPEQPASIQAIGRFVPTQRL
LRELDELEIWPLNRLQPSKRVA
>Mature_181_residues
ATILQIPSLRDQQSREVKRLLMKHLRSFSDTLEVNDVAHVPLYQQLAVNIVWKVRMPPCSKRSIRIAFYYDEIGNDQQLF
IPTWQADPDPASRLSITAAEYWYSYVAATSKVYVLPVAQLRPWFAQQSQHLAAHEVIQQLPEQPASIQAIGRFVPTQRLL
RELDELEIWPLNRLQPSKRVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21104; Mature: 20972

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATILQIPSLRDQQSREVKRLLMKHLRSFSDTLEVNDVAHVPLYQQLAVNIVWKVRMPPC
CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHEEEEEEECCCC
SKRSIRIAFYYDEIGNDQQLFIPTWQADPDPASRLSITAAEYWYSYVAATSKVYVLPVAQ
CCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHEEHHHHHHHHHHHHHCCEEEEEEHHH
LRPWFAQQSQHLAAHEVIQQLPEQPASIQAIGRFVPTQRLLRELDELEIWPLNRLQPSKR
HCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
VA
CC
>Mature Secondary Structure 
ATILQIPSLRDQQSREVKRLLMKHLRSFSDTLEVNDVAHVPLYQQLAVNIVWKVRMPPC
CCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHEEEEEEECCCC
SKRSIRIAFYYDEIGNDQQLFIPTWQADPDPASRLSITAAEYWYSYVAATSKVYVLPVAQ
CCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHEEHHHHHHHHHHHHHCCEEEEEEHHH
LRPWFAQQSQHLAAHEVIQQLPEQPASIQAIGRFVPTQRLLRELDELEIWPLNRLQPSKR
HCHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
VA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA