| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898169
Identifier: 159898169
GI number: 159898169
Start: 1902483
End: 1904045
Strand: Direct
Name: 159898169
Synonym: Haur_1645
Alternate gene names: NA
Gene position: 1902483-1904045 (Clockwise)
Preceding gene: 159898168
Following gene: 159898170
Centisome position: 29.98
GC content: 52.34
Gene sequence:
>1563_bases ATGATGCAGATTGCCCGAATGAGTTTGTTGGCGCTATTGGTTGCTGCATTGAGTGCATGTACTGCAACTACCACCAACGT TTCGTCACTTGAAACGACCACGCCACTTGCACTTGCAACCCCTACCCTGCCACCGGAAACTGCTACTCCGGTTGTTGCCG CTACGACGACGGTTAGTACAACCACTGAGCTGCTGTTGCGTGCCCAGCCAATTGATTATTGTGAGTCTGGTGCGCCGACT CGTGGCTGTGGCAAGCCCTTAGCGTTGCAAATTGCCGACTATCTTCAGCGCCATCCTGATGATCCCCAAGCACTGGCGTT GTGGCGACGAATCATCAGCATTGGTCAGCCCACACAGGAAATCGGGGGGGACGATCCGCAGCAGATGGATACTACATGGG CTTATGATGGCTGGACTGAGGCAGAATTTTTGGCGCTTGATTTACCCAGCAAGTTGACGGTAGGCCAACCAAGCTTAGAA ATTGACCAACTCACAATTATGCCCACCAACTTGGATGGCGATGCAACCCAAGATTATCTGCTTTATGCGAGAATTTCTGG TACGCATCCCAAGCTAGGCAAACTTCGTTGGATGCGTTGGCAGCATGGGCGTTGGGTTGGTGAGCAGATCTTGAGTTTCA ACAATGATTCAGGGGCGCAGGTTGAACTTGGTGATGTTACTGGCGATGCTCAACCAGAGTTGCTGGTGCGCTCAAGCGGT TGCGGCTCCGCTTGTTCTGGTCGGACGTATGGTTGGACTTGGCGTGATGGCGTGGCGTGGCAATTATTTCCCGACTGGGC CGATACCGGCGATTTGAGCATAAGCCAAAATAGTCCGACCCTCAGCGTTAGTAGCCCTGATGCCAATTATCGCTTTGATG GGCAGTATTTAAGCCCGGCTGAATTGGCGTTGCCAACAGGAACATACTCGCATACGATTGGCGCTCAGATGCGCCATGCC CAAGGCTTGTTAGTGCTTGGCCGCTTTGATGAAGCCATTATGTGGCTCGAACGTGCTGCAAATCAGGCCGATGGTAGTGC CTATTTTGGCTACAAAACCACATTCAAGGATGCGCGGCCTGTTGCGCTCTTTCGGATTGGCGCGATTCATCTACTCAATC ACAATCCGCTGGCGGCACAGGCAGCATGGGCGCAAGTCATCCAGCGCTTTCCGCACTCGCTGGCAGCGGCAGCAGTGCAA AAATTTAGTCTTTCTAGTTTTAATGGCTCGATTACTCAATGGTGTAGCCTGCTAGATACTGAACGTCCATTGATTATGGA AGAATACCGACGCGCTTGGCTGGATGGGTTTTCGCTCAATGAGTTTGATTGGTTGCCACTTTGTCATCCACGGGTGCTTG TTCCGCTGTATGAATGGACGCAAGCTACACCGCTTGAGCAACAATTTGCTAGCTTGGGCTTGCCTTGGCAGCAGCTTAGC ACAGCCTACGATTTAAATGGCGATGGAGTGAATGACCCGCTGGGCGTGGTCGATTGGCTTGGGATATATACACCGTGGGC AATGCTCTCGACCGAGGTTGGCTATCAGCCGCTCTATGTGTGA
Upstream 100 bases:
>100_bases CTTTTCGATCATCTCATTGATCTATCACCTTTGCATCATTGTTGGGTAACGCATGAGTTACTACAGTGCAGCTAACCCCA ATTAATGCTGCGGAGAGCTG
Downstream 100 bases:
>100_bases CAGCCATGGAGTAGTGCCACAGATTTGGCAACCCTCACTGATTCTTATTTCCCATTTGACCAACCACAGATAGCCTCGAT TACCGATCTTGATGCTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MMQIARMSLLALLVAALSACTATTTNVSSLETTTPLALATPTLPPETATPVVAATTTVSTTTELLLRAQPIDYCESGAPT RGCGKPLALQIADYLQRHPDDPQALALWRRIISIGQPTQEIGGDDPQQMDTTWAYDGWTEAEFLALDLPSKLTVGQPSLE IDQLTIMPTNLDGDATQDYLLYARISGTHPKLGKLRWMRWQHGRWVGEQILSFNNDSGAQVELGDVTGDAQPELLVRSSG CGSACSGRTYGWTWRDGVAWQLFPDWADTGDLSISQNSPTLSVSSPDANYRFDGQYLSPAELALPTGTYSHTIGAQMRHA QGLLVLGRFDEAIMWLERAANQADGSAYFGYKTTFKDARPVALFRIGAIHLLNHNPLAAQAAWAQVIQRFPHSLAAAAVQ KFSLSSFNGSITQWCSLLDTERPLIMEEYRRAWLDGFSLNEFDWLPLCHPRVLVPLYEWTQATPLEQQFASLGLPWQQLS TAYDLNGDGVNDPLGVVDWLGIYTPWAMLSTEVGYQPLYV
Sequences:
>Translated_520_residues MMQIARMSLLALLVAALSACTATTTNVSSLETTTPLALATPTLPPETATPVVAATTTVSTTTELLLRAQPIDYCESGAPT RGCGKPLALQIADYLQRHPDDPQALALWRRIISIGQPTQEIGGDDPQQMDTTWAYDGWTEAEFLALDLPSKLTVGQPSLE IDQLTIMPTNLDGDATQDYLLYARISGTHPKLGKLRWMRWQHGRWVGEQILSFNNDSGAQVELGDVTGDAQPELLVRSSG CGSACSGRTYGWTWRDGVAWQLFPDWADTGDLSISQNSPTLSVSSPDANYRFDGQYLSPAELALPTGTYSHTIGAQMRHA QGLLVLGRFDEAIMWLERAANQADGSAYFGYKTTFKDARPVALFRIGAIHLLNHNPLAAQAAWAQVIQRFPHSLAAAAVQ KFSLSSFNGSITQWCSLLDTERPLIMEEYRRAWLDGFSLNEFDWLPLCHPRVLVPLYEWTQATPLEQQFASLGLPWQQLS TAYDLNGDGVNDPLGVVDWLGIYTPWAMLSTEVGYQPLYV >Mature_520_residues MMQIARMSLLALLVAALSACTATTTNVSSLETTTPLALATPTLPPETATPVVAATTTVSTTTELLLRAQPIDYCESGAPT RGCGKPLALQIADYLQRHPDDPQALALWRRIISIGQPTQEIGGDDPQQMDTTWAYDGWTEAEFLALDLPSKLTVGQPSLE IDQLTIMPTNLDGDATQDYLLYARISGTHPKLGKLRWMRWQHGRWVGEQILSFNNDSGAQVELGDVTGDAQPELLVRSSG CGSACSGRTYGWTWRDGVAWQLFPDWADTGDLSISQNSPTLSVSSPDANYRFDGQYLSPAELALPTGTYSHTIGAQMRHA QGLLVLGRFDEAIMWLERAANQADGSAYFGYKTTFKDARPVALFRIGAIHLLNHNPLAAQAAWAQVIQRFPHSLAAAAVQ KFSLSSFNGSITQWCSLLDTERPLIMEEYRRAWLDGFSLNEFDWLPLCHPRVLVPLYEWTQATPLEQQFASLGLPWQQLS TAYDLNGDGVNDPLGVVDWLGIYTPWAMLSTEVGYQPLYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57227; Mature: 57227
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQIARMSLLALLVAALSACTATTTNVSSLETTTPLALATPTLPPETATPVVAATTTVST CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHH TTELLLRAQPIDYCESGAPTRGCGKPLALQIADYLQRHPDDPQALALWRRIISIGQPTQE HHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH IGGDDPQQMDTTWAYDGWTEAEFLALDLPSKLTVGQPSLEIDQLTIMPTNLDGDATQDYL HCCCCHHHCCCEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEE LYARISGTHPKLGKLRWMRWQHGRWVGEQILSFNNDSGAQVELGDVTGDAQPELLVRSSG EEEEECCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEECCC CGSACSGRTYGWTWRDGVAWQLFPDWADTGDLSISQNSPTLSVSSPDANYRFDGQYLSPA CCCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEECCCCEEEECCCCCCEEECCCCCCCH ELALPTGTYSHTIGAQMRHAQGLLVLGRFDEAIMWLERAANQADGSAYFGYKTTFKDARP HHCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCCEEECEECCCCCCCC VALFRIGAIHLLNHNPLAAQAAWAQVIQRFPHSLAAAAVQKFSLSSFNGSITQWCSLLDT EEEEEECEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC ERPLIMEEYRRAWLDGFSLNEFDWLPLCHPRVLVPLYEWTQATPLEQQFASLGLPWQQLS CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCHHHHHHHCCCCHHHHC TAYDLNGDGVNDPLGVVDWLGIYTPWAMLSTEVGYQPLYV CEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCC >Mature Secondary Structure MMQIARMSLLALLVAALSACTATTTNVSSLETTTPLALATPTLPPETATPVVAATTTVST CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHH TTELLLRAQPIDYCESGAPTRGCGKPLALQIADYLQRHPDDPQALALWRRIISIGQPTQE HHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH IGGDDPQQMDTTWAYDGWTEAEFLALDLPSKLTVGQPSLEIDQLTIMPTNLDGDATQDYL HCCCCHHHCCCEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEE LYARISGTHPKLGKLRWMRWQHGRWVGEQILSFNNDSGAQVELGDVTGDAQPELLVRSSG EEEEECCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEECCC CGSACSGRTYGWTWRDGVAWQLFPDWADTGDLSISQNSPTLSVSSPDANYRFDGQYLSPA CCCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEECCCCEEEECCCCCCEEECCCCCCCH ELALPTGTYSHTIGAQMRHAQGLLVLGRFDEAIMWLERAANQADGSAYFGYKTTFKDARP HHCCCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCCCCCEEECEECCCCCCCC VALFRIGAIHLLNHNPLAAQAAWAQVIQRFPHSLAAAAVQKFSLSSFNGSITQWCSLLDT EEEEEECEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC ERPLIMEEYRRAWLDGFSLNEFDWLPLCHPRVLVPLYEWTQATPLEQQFASLGLPWQQLS CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCHHHHHHHCCCCHHHHC TAYDLNGDGVNDPLGVVDWLGIYTPWAMLSTEVGYQPLYV CEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA