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The map label for this gene is ssuC [C]

Identifier: 159898102

GI number: 159898102

Start: 1834899

End: 1835723

Strand: Direct

Name: ssuC [C]

Synonym: Haur_1578

Alternate gene names: 159898102

Gene position: 1834899-1835723 (Clockwise)

Preceding gene: 159898101

Following gene: 159898103

Centisome position: 28.91

GC content: 53.21

Gene sequence:

>825_bases
ATGCTTCAAGATTATGGCCGCATGGCCTATGTTGCTGAATATCCTCAAACCACAGTGCGCCGCAAGCAACGCCGTGCTTG
GTTGGGTTCGAGTCGGTTGTGGGTTGGGCTTTCGTTGCTGGGCTTGCTGTTGGCATGGCGCGGTTTAGTCGCTTGGCAAC
AATACCCAGCTTTTGTTTTGCCAACGCCTGAAGCGGTTGCTAGCCGCTGGTGGCAGGAATTAACCCAAGGTGCGTTGCTG
CAACACACCTCTCGCACCTTAATCGAAGCGCTGGGCGGTTTTGGCTTGGCCTTCAGTGCAAGTTTGGTTTTGGGCTATAT
CTTGGCCCATTGGCATTGGCTCGATCGAATTGTCTCGCCGCAACTGGCGATTGTGCAGGCGATTCCAATCGTCGCGGTTG
CACCGTTGATTCTGATTTGGGTCGGCGCTGATTTGCGGGCTAAATTGTTGGTTGCCGCCTTGGTTACCTTCTTTCCGATG
CTCAGCAGTGTGATTGTGGCTTTGCGCAGCGTGCCCCGCGATATTCGCGAAATGGCGGCGATCAGTGGAGCCAATCGCTG
GCAAAGTTTGTGGCAGATTGAATTGCCTTTGGCCTTACCGGGGATTTTCGGCGGGATCAAAACAGGCCTTGCCTTGGCTA
CGACTGGCGCGGTTGTCGCTGAGTTTATTGGTGGTCGCGAAGGGCTGGGAGCGTTGATTAATATTGCTCGTGGTTTATTT
GATACGCCGCTGATTTTTGCGGCTTTGTTGACCCTCGGTTTGCTGACATTTGGGTTTTATCAGCTAGCAATGTGGCTAGA
ACGACGTTTGGTCACTTGGGAATAA

Upstream 100 bases:

>100_bases
CTGTTTGGTTTCAACGGCGCTTGGGTTGCTTGCAGCTACGTCGTGATTGACCCTGAGATGATTGATTCTTTTGGGGTTTT
TTGTTTTTAGGTACACACTT

Downstream 100 bases:

>100_bases
TTTTTTTGGATGGAGTTTTCAATGCGTTATCGTCGTATCTTAGCCGTGGTTGGGTTATTCTTTTTGGCGGCTTGTGGTGG
GCAAACTGCTACGCCAACCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLQDYGRMAYVAEYPQTTVRRKQRRAWLGSSRLWVGLSLLGLLLAWRGLVAWQQYPAFVLPTPEAVASRWWQELTQGALL
QHTSRTLIEALGGFGLAFSASLVLGYILAHWHWLDRIVSPQLAIVQAIPIVAVAPLILIWVGADLRAKLLVAALVTFFPM
LSSVIVALRSVPRDIREMAAISGANRWQSLWQIELPLALPGIFGGIKTGLALATTGAVVAEFIGGREGLGALINIARGLF
DTPLIFAALLTLGLLTFGFYQLAMWLERRLVTWE

Sequences:

>Translated_274_residues
MLQDYGRMAYVAEYPQTTVRRKQRRAWLGSSRLWVGLSLLGLLLAWRGLVAWQQYPAFVLPTPEAVASRWWQELTQGALL
QHTSRTLIEALGGFGLAFSASLVLGYILAHWHWLDRIVSPQLAIVQAIPIVAVAPLILIWVGADLRAKLLVAALVTFFPM
LSSVIVALRSVPRDIREMAAISGANRWQSLWQIELPLALPGIFGGIKTGLALATTGAVVAEFIGGREGLGALINIARGLF
DTPLIFAALLTLGLLTFGFYQLAMWLERRLVTWE
>Mature_274_residues
MLQDYGRMAYVAEYPQTTVRRKQRRAWLGSSRLWVGLSLLGLLLAWRGLVAWQQYPAFVLPTPEAVASRWWQELTQGALL
QHTSRTLIEALGGFGLAFSASLVLGYILAHWHWLDRIVSPQLAIVQAIPIVAVAPLILIWVGADLRAKLLVAALVTFFPM
LSSVIVALRSVPRDIREMAAISGANRWQSLWQIELPLALPGIFGGIKTGLALATTGAVVAEFIGGREGLGALINIARGLF
DTPLIFAALLTLGLLTFGFYQLAMWLERRLVTWE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=216, Percent_Identity=31.4814814814815, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1786564, Length=239, Percent_Identity=28.0334728033473, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30238; Mature: 30238

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQDYGRMAYVAEYPQTTVRRKQRRAWLGSSRLWVGLSLLGLLLAWRGLVAWQQYPAFVL
CCCCHHCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEC
PTPEAVASRWWQELTQGALLQHTSRTLIEALGGFGLAFSASLVLGYILAHWHWLDRIVSP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QLAIVQAIPIVAVAPLILIWVGADLRAKLLVAALVTFFPMLSSVIVALRSVPRDIREMAA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ISGANRWQSLWQIELPLALPGIFGGIKTGLALATTGAVVAEFIGGREGLGALINIARGLF
HCCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
DTPLIFAALLTLGLLTFGFYQLAMWLERRLVTWE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLQDYGRMAYVAEYPQTTVRRKQRRAWLGSSRLWVGLSLLGLLLAWRGLVAWQQYPAFVL
CCCCHHCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEC
PTPEAVASRWWQELTQGALLQHTSRTLIEALGGFGLAFSASLVLGYILAHWHWLDRIVSP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
QLAIVQAIPIVAVAPLILIWVGADLRAKLLVAALVTFFPMLSSVIVALRSVPRDIREMAA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ISGANRWQSLWQIELPLALPGIFGGIKTGLALATTGAVVAEFIGGREGLGALINIARGLF
HCCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
DTPLIFAALLTLGLLTFGFYQLAMWLERRLVTWE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]