| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898099
Identifier: 159898099
GI number: 159898099
Start: 1831555
End: 1832973
Strand: Direct
Name: 159898099
Synonym: Haur_1575
Alternate gene names: NA
Gene position: 1831555-1832973 (Clockwise)
Preceding gene: 159898098
Following gene: 159898100
Centisome position: 28.86
GC content: 46.44
Gene sequence:
>1419_bases ATGGAGGCGCGTTGCATTTTGGAACACCCTAAAAAAGGCATTCGTACATTTCTGATTGTTTGGTTTACCCAATCAATCTC TGTGATGGGGAGTTCGCTAACCTTTTTTACGATTATTATTTGGCTGACCAAGCATCAATATCCCGATGAATCGCAAAAAC AACTGTTAGCTTTTGCCTTATCAACCTTGGGCTTGGCGCGTGCCCTAACGACAATCGTGCTAGCTCCGATTGCTGGAGCT TGGGTTGATCGCCATGATCGGAAGCAGACCATGATTATTGCGAATATAATCAATAGTTTGTTAGCATTTGGCCTGATGGC GCTTATGCTGGTTAATTCACTCGAATTATGGTCATTGATGCTGCTTCAAGTTGGGCTTGCCGCATCAGGGTCGTTTCATG CTGCGGCCTTTGATACCGCCTATTCGACCCTGGTTCCGAAGCGTTTTCTGCCGCGGGCTAATGGCATGATGCAAACAATG TGGTCGCTTTCGACCATTTTAGCCCCGACCGTGGCTGCTGCCTTGATTGCCCTACCGGATATGCTCCGGAAAAGTGGTGG ATCAGCTGGTTGGACTAGCGTTATTACTAACTTAGCAGATGGCACAGCCTTGACGATTGGGGTTGATGCACTGAGTTTTT TAATTGTTGCAATCATTCTCAGTTTTCTAACCATTCCATCACCGCAACGAGCTGATTTAAATACCACACAAGGCAAAAAG AAAAGTCTCTGGCTCGATATTAAGGAAGGGTTTGCCTATATTTGGCAGCGACCAGCGTTCTTATGGTTATTAAGTGCCTT TACGATTGCCAATTTTGTCGTTTCAACCCGCAGTATTTTTCAGCCGCTGATTCTCAAATTTAATTTGGTTGCCGATTGGA CGCTGCATGGTTTTTCGTATGATACCGCATTGGCGTTGCTGAGTACATCGGCAAGTGTTGGTGGAATTATTGGGGGCATT TTTATTAGTTCTTGGGGTGGCTTGAAAACGAAACGGGTTTATGGGGTGTTGTTGCCAATGGTGGTTTTTAGTCTCGGACA GATTTTGTTTGGATTGGCTTCCTCGATTTACCTAACTGCGATTGCGGCCCTGATCTCCTCAGGCGCGATTCCTATTCTCA ATGCCCATTCGCAGTCGATTTGGCAAGCCCAAACCCCATCGGAAATTCAGGGTCGCGTGTTTGCAGTCCGACGGTTGATT GCCCAATGTACGTTGCCACTTGGCACGATGTTAGCCGGAATTTTAGGTGGCTTGTTTAATCCAGGCATGATGATGGCACT CTTAGGGGTTGGAATGGGCGTGTATTGTTTCTTCCAATTTATGAACCCTACGCTGTTGCAGATCGAGCATGATCCAAATA ATCCACCCGAGCCTGATCCAAATAATCCGCAACATGGGATACCGCAAACAGCCAAGTAA
Upstream 100 bases:
>100_bases TGCTGGTAGGATTTTTTGCTCTCGATATTGTGATTGAATTTGCAGCATCAATTGCCTTGACAAAAGCGAATATGCCGATG TTTAGGGGATTGGTTGTTGT
Downstream 100 bases:
>100_bases GGCGATGTGGCTAAAACAGTCAGGAGCAAGGGCATAAATGTATGAGTGAAGAACTTATTTTTACCCATAGTGAAGATGGG GTTGGCTTGGCCGGAGTGAT
Product: major facilitator transporter
Products: NA
Alternate protein names: Macrolide-Efflux Protein; Non-Ribosomal Peptide Synthetase-Like Protein; Facilitator Family Transporter; Amino Acid Adenylation Domain-Containing Protein; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Amino Acid Adenylation Domain Protein; Transporter Facilitator Family; ABC Transporter Permease Protein; Macrolide-Efflux Transmembrane Protein; Non-Ribosomal Peptide Synthetase; ABC Transporter Permease; Non-Ribosomal Peptide Synthetase/Polyketide Synthase; Facilitator Superfamily Mfs-1 Family Protein; H+ Antiporter Protein; Facilitator Superfamily MacrolideCation Symporter; Macrolide-Efflux Pump; Macrolide Efflux Protein; Facilitator Family Protein
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MEARCILEHPKKGIRTFLIVWFTQSISVMGSSLTFFTIIIWLTKHQYPDESQKQLLAFALSTLGLARALTTIVLAPIAGA WVDRHDRKQTMIIANIINSLLAFGLMALMLVNSLELWSLMLLQVGLAASGSFHAAAFDTAYSTLVPKRFLPRANGMMQTM WSLSTILAPTVAAALIALPDMLRKSGGSAGWTSVITNLADGTALTIGVDALSFLIVAIILSFLTIPSPQRADLNTTQGKK KSLWLDIKEGFAYIWQRPAFLWLLSAFTIANFVVSTRSIFQPLILKFNLVADWTLHGFSYDTALALLSTSASVGGIIGGI FISSWGGLKTKRVYGVLLPMVVFSLGQILFGLASSIYLTAIAALISSGAIPILNAHSQSIWQAQTPSEIQGRVFAVRRLI AQCTLPLGTMLAGILGGLFNPGMMMALLGVGMGVYCFFQFMNPTLLQIEHDPNNPPEPDPNNPQHGIPQTAK
Sequences:
>Translated_472_residues MEARCILEHPKKGIRTFLIVWFTQSISVMGSSLTFFTIIIWLTKHQYPDESQKQLLAFALSTLGLARALTTIVLAPIAGA WVDRHDRKQTMIIANIINSLLAFGLMALMLVNSLELWSLMLLQVGLAASGSFHAAAFDTAYSTLVPKRFLPRANGMMQTM WSLSTILAPTVAAALIALPDMLRKSGGSAGWTSVITNLADGTALTIGVDALSFLIVAIILSFLTIPSPQRADLNTTQGKK KSLWLDIKEGFAYIWQRPAFLWLLSAFTIANFVVSTRSIFQPLILKFNLVADWTLHGFSYDTALALLSTSASVGGIIGGI FISSWGGLKTKRVYGVLLPMVVFSLGQILFGLASSIYLTAIAALISSGAIPILNAHSQSIWQAQTPSEIQGRVFAVRRLI AQCTLPLGTMLAGILGGLFNPGMMMALLGVGMGVYCFFQFMNPTLLQIEHDPNNPPEPDPNNPQHGIPQTAK >Mature_472_residues MEARCILEHPKKGIRTFLIVWFTQSISVMGSSLTFFTIIIWLTKHQYPDESQKQLLAFALSTLGLARALTTIVLAPIAGA WVDRHDRKQTMIIANIINSLLAFGLMALMLVNSLELWSLMLLQVGLAASGSFHAAAFDTAYSTLVPKRFLPRANGMMQTM WSLSTILAPTVAAALIALPDMLRKSGGSAGWTSVITNLADGTALTIGVDALSFLIVAIILSFLTIPSPQRADLNTTQGKK KSLWLDIKEGFAYIWQRPAFLWLLSAFTIANFVVSTRSIFQPLILKFNLVADWTLHGFSYDTALALLSTSASVGGIIGGI FISSWGGLKTKRVYGVLLPMVVFSLGQILFGLASSIYLTAIAALISSGAIPILNAHSQSIWQAQTPSEIQGRVFAVRRLI AQCTLPLGTMLAGILGGLFNPGMMMALLGVGMGVYCFFQFMNPTLLQIEHDPNNPPEPDPNNPQHGIPQTAK
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51183; Mature: 51183
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEARCILEHPKKGIRTFLIVWFTQSISVMGSSLTFFTIIIWLTKHQYPDESQKQLLAFAL CCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH STLGLARALTTIVLAPIAGAWVDRHDRKQTMIIANIINSLLAFGLMALMLVNSLELWSLM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQVGLAASGSFHAAAFDTAYSTLVPKRFLPRANGMMQTMWSLSTILAPTVAAALIALPD HHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MLRKSGGSAGWTSVITNLADGTALTIGVDALSFLIVAIILSFLTIPSPQRADLNTTQGKK HHHHCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KSLWLDIKEGFAYIWQRPAFLWLLSAFTIANFVVSTRSIFQPLILKFNLVADWTLHGFSY HHEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCH DTALALLSTSASVGGIIGGIFISSWGGLKTKRVYGVLLPMVVFSLGQILFGLASSIYLTA HHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAALISSGAIPILNAHSQSIWQAQTPSEIQGRVFAVRRLIAQCTLPLGTMLAGILGGLFN HHHHHCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC PGMMMALLGVGMGVYCFFQFMNPTLLQIEHDPNNPPEPDPNNPQHGIPQTAK HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEARCILEHPKKGIRTFLIVWFTQSISVMGSSLTFFTIIIWLTKHQYPDESQKQLLAFAL CCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH STLGLARALTTIVLAPIAGAWVDRHDRKQTMIIANIINSLLAFGLMALMLVNSLELWSLM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQVGLAASGSFHAAAFDTAYSTLVPKRFLPRANGMMQTMWSLSTILAPTVAAALIALPD HHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MLRKSGGSAGWTSVITNLADGTALTIGVDALSFLIVAIILSFLTIPSPQRADLNTTQGKK HHHHCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC KSLWLDIKEGFAYIWQRPAFLWLLSAFTIANFVVSTRSIFQPLILKFNLVADWTLHGFSY HHEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCH DTALALLSTSASVGGIIGGIFISSWGGLKTKRVYGVLLPMVVFSLGQILFGLASSIYLTA HHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAALISSGAIPILNAHSQSIWQAQTPSEIQGRVFAVRRLIAQCTLPLGTMLAGILGGLFN HHHHHCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC PGMMMALLGVGMGVYCFFQFMNPTLLQIEHDPNNPPEPDPNNPQHGIPQTAK HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA