Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898065

Identifier: 159898065

GI number: 159898065

Start: 1797389

End: 1797796

Strand: Direct

Name: 159898065

Synonym: Haur_1541

Alternate gene names: NA

Gene position: 1797389-1797796 (Clockwise)

Preceding gene: 159898064

Following gene: 159898066

Centisome position: 28.32

GC content: 50.98

Gene sequence:

>408_bases
GTGTTGATTAGCTCGGCGTTTAGTGCGGGCCAATTTTGGATTTTGTTTAAAAATTGGCAGCGCAACCAAGCCGCCGCGCC
GCCAGCCCAAAAAATCGCTAATTTAGCTGATATTCCAGTTGGTGGAATGCTGCTGTTTCGTTACCCCAACGAGCATGAGC
CATGCATTTTGGTGCGGCCTGATGAGAATACCTTGGTTGCCTATAGCCAAAAATGCACCCACCTTTCATGTGCAGTGATT
CCCAACGTCGCCGAAAATAAAATCGTTTGCCCATGCCACCAAGGCTACTTCAGCTTGGATGAAGGCCGACCATTAGCGGG
GCCGCCCCAACACCCATTGCCACGCATTCATGTTGAGGTGCAAGGCGATGAGGTGTTTGCAACCTCGGTGGAGTTACGCA
GCATATGA

Upstream 100 bases:

>100_bases
TGGCCTGCCATTGTGCCAACAACCATAATGGCGGCAAGATTTCCCAATCGATGTTGCTCGAGATAACTATGTTTCACGCC
GTGAATTTGCCAAATTTTTG

Downstream 100 bases:

>100_bases
AACAACGCTTTCCACGCCATCAAAAAATGACCATCGTCCATGGCATTTTAAGTATTGTGCTGATCATCGATATTGTGCAG
CTTTGGTTGTTGATCGCCAC

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: Rieske Domain-Containing Protein; Rieske Domain Protein; Rieske Iron-Sulfur Protein; Twin-Arginine Translocation Pathway Signal; Rieske Iron Sulphur Protein; Rieske Iron-Sulfur Domain Protein; Rieske Iron-Sulfur Domain

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MLISSAFSAGQFWILFKNWQRNQAAAPPAQKIANLADIPVGGMLLFRYPNEHEPCILVRPDENTLVAYSQKCTHLSCAVI
PNVAENKIVCPCHQGYFSLDEGRPLAGPPQHPLPRIHVEVQGDEVFATSVELRSI

Sequences:

>Translated_135_residues
MLISSAFSAGQFWILFKNWQRNQAAAPPAQKIANLADIPVGGMLLFRYPNEHEPCILVRPDENTLVAYSQKCTHLSCAVI
PNVAENKIVCPCHQGYFSLDEGRPLAGPPQHPLPRIHVEVQGDEVFATSVELRSI
>Mature_135_residues
MLISSAFSAGQFWILFKNWQRNQAAAPPAQKIANLADIPVGGMLLFRYPNEHEPCILVRPDENTLVAYSQKCTHLSCAVI
PNVAENKIVCPCHQGYFSLDEGRPLAGPPQHPLPRIHVEVQGDEVFATSVELRSI

Specific function: Unknown

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14947; Mature: 14947

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISSAFSAGQFWILFKNWQRNQAAAPPAQKIANLADIPVGGMLLFRYPNEHEPCILVRP
CEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEC
DENTLVAYSQKCTHLSCAVIPNVAENKIVCPCHQGYFSLDEGRPLAGPPQHPLPRIHVEV
CCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEE
QGDEVFATSVELRSI
ECCEEEEEEEEEECC
>Mature Secondary Structure
MLISSAFSAGQFWILFKNWQRNQAAAPPAQKIANLADIPVGGMLLFRYPNEHEPCILVRP
CEECCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEC
DENTLVAYSQKCTHLSCAVIPNVAENKIVCPCHQGYFSLDEGRPLAGPPQHPLPRIHVEV
CCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEE
QGDEVFATSVELRSI
ECCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA