| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897972
Identifier: 159897972
GI number: 159897972
Start: 1680909
End: 1682207
Strand: Reverse
Name: 159897972
Synonym: Haur_1447
Alternate gene names: NA
Gene position: 1682207-1680909 (Counterclockwise)
Preceding gene: 159897973
Following gene: 159897971
Centisome position: 26.51
GC content: 51.42
Gene sequence:
>1299_bases ATGAACAAACTTGATACAAATAATGACGCGCAGGCCTCAACTAAGCTTGCGCGTTCATTAGGTTGGACATTGGTGATTAA ACTGCTGATCTCGCTGCATGTTGGGGTTGGCGATTTTTTGTTGCCCTTGTACGTTCAAGCGCTGGGTGGTTCGCCCCAGG TGATTGGCAATTTGGTGGGTTTGGGCGCGGCCTTTGGCGTATTTGCGCGGCTCAGCCTGAGTTGGCTTGCCGATCGTGGG ATCATCGGGATTTTGCTGCGTTTGAGTTTGGCGGCCTTAGCGAGTGGCTTTGCAATTTGGAGCTTTGCTGATAGCAGTGT TTGGTTAATGCCTGGTCAAGCATTGCTCGCGATCGGGCGAGCAGGCTCGACTATCTGTTTAAGTTTGTTGATTGCCCAAT TAACCAGCCAAGGTCAACGGGGTTCAGGCTATGGGCGGCTGACCATGGCCAGTTCATTGGCAACAATTGTTGGGGCGATC ATCGCGGGCATTGGCTTTATTGGCTGGGATGCAGAAACTCGCCAGCAATTGCAACAATTCACTTGGCTGCAAACTAGCCT CAATTATTTACCCAATCCAATTCCCCGTGTCGAGCTATTTCATGGCATTTACATCGTGTTTAGTAGTAGCGTCGTCGTAG CAGGAATCTTCAGTTTACGTTCATGGCCCCATGCAATTCCGGCAAAACGCGGTACAATACAAGCAATATGGCGCAGTGTG TTACGTCAGCCAACAATCCGCAGTCTGTTGCTTGTGCAAAGCTGCATCAGCGCGGGCTATAGTGCCTCGATTCCAATGAC CGTGCCGTTATTGACTGATCGTTTTGGGGCAAGTGTGGCGGCGGTCGCTGTGGCCTATATTGTGCCAGGCATTATTTATG CGCTGTTTCCAGCACGCCTTGGGCGCGTCGCTGATCGGATTGGCTATCGACGGGCTGCCAAGCTTGGGCTTGGCGTAAGT ATGTTAGTTTACCTAGCAATACCTATCAGCCCACAACTTGCAATCACCGCAGCATTTTGGGCTTTTGAAGCGCTGGCATG GAGTTTTTATGTACCAGCTTTGGAAGCCTTACTTGCGGAAAGTGTGATACCACAACAACGCGGCACAGCCTTGGCGATCT ATGGAGCGTCAGGCGCATTGACCGCAACTGTGGCAGCACCCTTGGGCGCACGCTTGTATAGCCATTGGATCGCCGCACCC TTTTTATTCTCGGCCCTTTGCCTAGGTATGGCAGCCATGTTTGCTGCCCGTACCCCACCAACCAATGCCGATTATGCTAC CATTAAATCTCACAATTGA
Upstream 100 bases:
>100_bases ACCCTTGGTAGCGGAATCCTCCTAATTACAACCTCATATTTGGCGATGCAGATCTGGTGGGCCTTCCAACCTGACGAGCC TGCCACCTCAGCCGATTCTG
Downstream 100 bases:
>100_bases GGAACCCACCCTGCCCGACTTGACTCCGTTTCCGCAAACTGGCCTCGTTCATTGGACGAGCAAGTTGGGCGTTGAGCTTG CTGTTCGCCATATTACGCCT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MNKLDTNNDAQASTKLARSLGWTLVIKLLISLHVGVGDFLLPLYVQALGGSPQVIGNLVGLGAAFGVFARLSLSWLADRG IIGILLRLSLAALASGFAIWSFADSSVWLMPGQALLAIGRAGSTICLSLLIAQLTSQGQRGSGYGRLTMASSLATIVGAI IAGIGFIGWDAETRQQLQQFTWLQTSLNYLPNPIPRVELFHGIYIVFSSSVVVAGIFSLRSWPHAIPAKRGTIQAIWRSV LRQPTIRSLLLVQSCISAGYSASIPMTVPLLTDRFGASVAAVAVAYIVPGIIYALFPARLGRVADRIGYRRAAKLGLGVS MLVYLAIPISPQLAITAAFWAFEALAWSFYVPALEALLAESVIPQQRGTALAIYGASGALTATVAAPLGARLYSHWIAAP FLFSALCLGMAAMFAARTPPTNADYATIKSHN
Sequences:
>Translated_432_residues MNKLDTNNDAQASTKLARSLGWTLVIKLLISLHVGVGDFLLPLYVQALGGSPQVIGNLVGLGAAFGVFARLSLSWLADRG IIGILLRLSLAALASGFAIWSFADSSVWLMPGQALLAIGRAGSTICLSLLIAQLTSQGQRGSGYGRLTMASSLATIVGAI IAGIGFIGWDAETRQQLQQFTWLQTSLNYLPNPIPRVELFHGIYIVFSSSVVVAGIFSLRSWPHAIPAKRGTIQAIWRSV LRQPTIRSLLLVQSCISAGYSASIPMTVPLLTDRFGASVAAVAVAYIVPGIIYALFPARLGRVADRIGYRRAAKLGLGVS MLVYLAIPISPQLAITAAFWAFEALAWSFYVPALEALLAESVIPQQRGTALAIYGASGALTATVAAPLGARLYSHWIAAP FLFSALCLGMAAMFAARTPPTNADYATIKSHN >Mature_432_residues MNKLDTNNDAQASTKLARSLGWTLVIKLLISLHVGVGDFLLPLYVQALGGSPQVIGNLVGLGAAFGVFARLSLSWLADRG IIGILLRLSLAALASGFAIWSFADSSVWLMPGQALLAIGRAGSTICLSLLIAQLTSQGQRGSGYGRLTMASSLATIVGAI IAGIGFIGWDAETRQQLQQFTWLQTSLNYLPNPIPRVELFHGIYIVFSSSVVVAGIFSLRSWPHAIPAKRGTIQAIWRSV LRQPTIRSLLLVQSCISAGYSASIPMTVPLLTDRFGASVAAVAVAYIVPGIIYALFPARLGRVADRIGYRRAAKLGLGVS MLVYLAIPISPQLAITAAFWAFEALAWSFYVPALEALLAESVIPQQRGTALAIYGASGALTATVAAPLGARLYSHWIAAP FLFSALCLGMAAMFAARTPPTNADYATIKSHN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45812; Mature: 45812
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLDTNNDAQASTKLARSLGWTLVIKLLISLHVGVGDFLLPLYVQALGGSPQVIGNLVG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH LGAAFGVFARLSLSWLADRGIIGILLRLSLAALASGFAIWSFADSSVWLMPGQALLAIGR HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHCCC AGSTICLSLLIAQLTSQGQRGSGYGRLTMASSLATIVGAIIAGIGFIGWDAETRQQLQQF CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TWLQTSLNYLPNPIPRVELFHGIYIVFSSSVVVAGIFSLRSWPHAIPAKRGTIQAIWRSV HHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LRQPTIRSLLLVQSCISAGYSASIPMTVPLLTDRFGASVAAVAVAYIVPGIIYALFPARL HCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH GRVADRIGYRRAAKLGLGVSMLVYLAIPISPQLAITAAFWAFEALAWSFYVPALEALLAE HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVIPQQRGTALAIYGASGALTATVAAPLGARLYSHWIAAPFLFSALCLGMAAMFAARTPP HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TNADYATIKSHN CCCCEEEECCCC >Mature Secondary Structure MNKLDTNNDAQASTKLARSLGWTLVIKLLISLHVGVGDFLLPLYVQALGGSPQVIGNLVG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH LGAAFGVFARLSLSWLADRGIIGILLRLSLAALASGFAIWSFADSSVWLMPGQALLAIGR HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHCCC AGSTICLSLLIAQLTSQGQRGSGYGRLTMASSLATIVGAIIAGIGFIGWDAETRQQLQQF CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TWLQTSLNYLPNPIPRVELFHGIYIVFSSSVVVAGIFSLRSWPHAIPAKRGTIQAIWRSV HHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LRQPTIRSLLLVQSCISAGYSASIPMTVPLLTDRFGASVAAVAVAYIVPGIIYALFPARL HCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH GRVADRIGYRRAAKLGLGVSMLVYLAIPISPQLAITAAFWAFEALAWSFYVPALEALLAE HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVIPQQRGTALAIYGASGALTATVAAPLGARLYSHWIAAPFLFSALCLGMAAMFAARTPP HHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TNADYATIKSHN CCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA