| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897962
Identifier: 159897962
GI number: 159897962
Start: 1663435
End: 1664562
Strand: Reverse
Name: 159897962
Synonym: Haur_1437
Alternate gene names: NA
Gene position: 1664562-1663435 (Counterclockwise)
Preceding gene: 159897964
Following gene: 159897961
Centisome position: 26.23
GC content: 38.65
Gene sequence:
>1128_bases ATGTTGCCACGACCTCCAGCCACAGCATGGTGGGTATTCAGACCAATTGCAGGCATTGATTTAACTGGTGATAATCCGAA TCTCTTTAATAATCCTCTTTTTGGCGATGCCCTGCTCATCAACCAAGCCGATTTATTACGATATTTGGATGAAGTTAAAT CGGATAGTAGGATTGCCGATCATCACGGCAGTTATCTTGGGATTTGCCAATCAGGCGTGCTCAATACAAAATGGTTCGAC GAAGAACATTCAAACGAACATTTTATGCTTCAAGCAGCAATTCGTCAGCAACAAATAGCTGGATTTTTAAGCATTATGGG ATTGATTCAACCCAACGATGTTTATCAATGTGGGCTTACTTATGACTTCATTAGACAGAAAGATCATTTCGTTCTATACA ATATTCACGAGGAAGATTGGTTATCATCGCGGGCTAATGGTATTTCCTTAGAGACATTTACTTGTTCAGCCAACTATGAC ATTCTCGAGTGGTCGTATAGTCAATTTGAGACATTTTGCACCAACAATGAAATAAATAAACTCTTCCAATATATGCACAG CAATGCTCAGAATCCAATCCAAATAACGTTACGTCAAGCAGTTGCGCGACTTTACAAAGCAATCATGGCAACAACATATA CCGATCAATTACTTGGTGCAATTACCACGCTTGAAATTTTGCTAACAAATGATCATAGTCGAACACCATACAAGAAAATC AAAGAACGAATTAGAACAATACTGGGGAGTGAATTGACCACTCGTTATGCGCTTGAAACAGTTTTTGAAAGCCGCAATCA TTATGTTCATCGCGGAACTGATCTGGTTGAACGAACAATTCCGCTGCAAGCTGTAGGCCTTGCAATTGCCACAATATTAC GCTATGCCGATGCTTGTATTGACTATAAAACTAAAGATCAGCTGCTGAATGATCTCGATCGGCGCTTACAAACGACTCGC ACCAATACATCGCGACAAAAACAGCTTTATTATTTACTTGATCAGCCCTATAGTATTGCTTTATTTAAGTATATTGATAA AACGCTTGAATTTGATTGTGAATTTAACAAAGGTTTATATGATCGTACTGATCGAATTTTCGAGCCTGAGAATTCATTTG ATGATTAG
Upstream 100 bases:
>100_bases ATCCATAACAACTAGCTCTTCAGGATACGCAGCATATTAAGCACAAATGTGCAGCATCACACTATTATAATGTCCGAAAT AAGCAGTGATCGGAGCCAAT
Downstream 100 bases:
>100_bases GATTGCTGCCTATGCAATATAATCGTATCGAGGCTGATTTGCGCGAGGATGCTTGGTATTTTGGCTTTTATCTTGGCAAT AGCACGCTGTTAGCCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MLPRPPATAWWVFRPIAGIDLTGDNPNLFNNPLFGDALLINQADLLRYLDEVKSDSRIADHHGSYLGICQSGVLNTKWFD EEHSNEHFMLQAAIRQQQIAGFLSIMGLIQPNDVYQCGLTYDFIRQKDHFVLYNIHEEDWLSSRANGISLETFTCSANYD ILEWSYSQFETFCTNNEINKLFQYMHSNAQNPIQITLRQAVARLYKAIMATTYTDQLLGAITTLEILLTNDHSRTPYKKI KERIRTILGSELTTRYALETVFESRNHYVHRGTDLVERTIPLQAVGLAIATILRYADACIDYKTKDQLLNDLDRRLQTTR TNTSRQKQLYYLLDQPYSIALFKYIDKTLEFDCEFNKGLYDRTDRIFEPENSFDD
Sequences:
>Translated_375_residues MLPRPPATAWWVFRPIAGIDLTGDNPNLFNNPLFGDALLINQADLLRYLDEVKSDSRIADHHGSYLGICQSGVLNTKWFD EEHSNEHFMLQAAIRQQQIAGFLSIMGLIQPNDVYQCGLTYDFIRQKDHFVLYNIHEEDWLSSRANGISLETFTCSANYD ILEWSYSQFETFCTNNEINKLFQYMHSNAQNPIQITLRQAVARLYKAIMATTYTDQLLGAITTLEILLTNDHSRTPYKKI KERIRTILGSELTTRYALETVFESRNHYVHRGTDLVERTIPLQAVGLAIATILRYADACIDYKTKDQLLNDLDRRLQTTR TNTSRQKQLYYLLDQPYSIALFKYIDKTLEFDCEFNKGLYDRTDRIFEPENSFDD >Mature_375_residues MLPRPPATAWWVFRPIAGIDLTGDNPNLFNNPLFGDALLINQADLLRYLDEVKSDSRIADHHGSYLGICQSGVLNTKWFD EEHSNEHFMLQAAIRQQQIAGFLSIMGLIQPNDVYQCGLTYDFIRQKDHFVLYNIHEEDWLSSRANGISLETFTCSANYD ILEWSYSQFETFCTNNEINKLFQYMHSNAQNPIQITLRQAVARLYKAIMATTYTDQLLGAITTLEILLTNDHSRTPYKKI KERIRTILGSELTTRYALETVFESRNHYVHRGTDLVERTIPLQAVGLAIATILRYADACIDYKTKDQLLNDLDRRLQTTR TNTSRQKQLYYLLDQPYSIALFKYIDKTLEFDCEFNKGLYDRTDRIFEPENSFDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43568; Mature: 43568
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPRPPATAWWVFRPIAGIDLTGDNPNLFNNPLFGDALLINQADLLRYLDEVKSDSRIAD CCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCHH HHGSYLGICQSGVLNTKWFDEEHSNEHFMLQAAIRQQQIAGFLSIMGLIQPNDVYQCGLT HCCCEEEHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC YDFIRQKDHFVLYNIHEEDWLSSRANGISLETFTCSANYDILEWSYSQFETFCTNNEINK HHHHCCCCCEEEEEECHHHHHHHCCCCCEEEEEEECCCCCEEECCHHHHHHHHCCHHHHH LFQYMHSNAQNPIQITLRQAVARLYKAIMATTYTDQLLGAITTLEILLTNDHSRTPYKKI HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHH KERIRTILGSELTTRYALETVFESRNHYVHRGTDLVERTIPLQAVGLAIATILRYADACI HHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHH DYKTKDQLLNDLDRRLQTTRTNTSRQKQLYYLLDQPYSIALFKYIDKTLEFDCEFNKGLY CCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCH DRTDRIFEPENSFDD HCCCCCCCCCCCCCC >Mature Secondary Structure MLPRPPATAWWVFRPIAGIDLTGDNPNLFNNPLFGDALLINQADLLRYLDEVKSDSRIAD CCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCEECHHHHHHHHHHHCCCCCCHH HHGSYLGICQSGVLNTKWFDEEHSNEHFMLQAAIRQQQIAGFLSIMGLIQPNDVYQCGLT HCCCEEEHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCEEECCCC YDFIRQKDHFVLYNIHEEDWLSSRANGISLETFTCSANYDILEWSYSQFETFCTNNEINK HHHHCCCCCEEEEEECHHHHHHHCCCCCEEEEEEECCCCCEEECCHHHHHHHHCCHHHHH LFQYMHSNAQNPIQITLRQAVARLYKAIMATTYTDQLLGAITTLEILLTNDHSRTPYKKI HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHH KERIRTILGSELTTRYALETVFESRNHYVHRGTDLVERTIPLQAVGLAIATILRYADACI HHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHH DYKTKDQLLNDLDRRLQTTRTNTSRQKQLYYLLDQPYSIALFKYIDKTLEFDCEFNKGLY CCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCH DRTDRIFEPENSFDD HCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA