| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897961
Identifier: 159897961
GI number: 159897961
Start: 1662824
End: 1663423
Strand: Reverse
Name: 159897961
Synonym: Haur_1436
Alternate gene names: NA
Gene position: 1663423-1662824 (Counterclockwise)
Preceding gene: 159897962
Following gene: 159897960
Centisome position: 26.21
GC content: 47.17
Gene sequence:
>600_bases ATGCAATATAATCGTATCGAGGCTGATTTGCGCGAGGATGCTTGGTATTTTGGCTTTTATCTTGGCAATAGCACGCTGTT AGCCTTTTACCACGATGCCGATATCTTCGACGAAGATTATGCTGAATTTTTGCTGGCGAATCGCCACGTTTTTGCCGCTA GCTTTGCCGTTTTCAGCAACAATTGCTTAACCCCGCATCCTTCAGATCAATCGGCTTTAACTCGGGCGGCAACTTGGGTA GCTCAAAGCATGCTCCCAACAGTTGCCTGCAATTATCCTATCGAGCCATGGGAATTAGCCCCAGCCAGCCAAGATCGTAC ATTTAACGCTGCCTTCCAGCATTTTGGTCAGGCACTGGCCTTGGGTACACTTCCCACTCAAATCATCCAAAATCATGATT ATTTTCCACACGTATTCAATGGCGGCAGCTTTTTAGAGCAGGTGATCATGGTTTTCGTCAATAATTTACTCGTTGATGCT GATGGGCTGGTGGTGAATGAGCAAGCCGCCTTGGAACGGGCAACATGGTGTTTGTTACGCTGGATTGATCGGAGCGTTGT GCTCGATCCACCAATCACGCCATGGGAAATTAATTGCTAA
Upstream 100 bases:
>100_bases AAACGCTTGAATTTGATTGTGAATTTAACAAAGGTTTATATGATCGTACTGATCGAATTTTCGAGCCTGAGAATTCATTT GATGATTAGGATTGCTGCCT
Downstream 100 bases:
>100_bases ATCGCTCGAAGTTTAGGCAACAATCGCGGAGCATCAGGCAATGCAATTAAACGAAATTTGGCTATACTGGCAATGATTGG TTTAGCTATGAGGTTAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MQYNRIEADLREDAWYFGFYLGNSTLLAFYHDADIFDEDYAEFLLANRHVFAASFAVFSNNCLTPHPSDQSALTRAATWV AQSMLPTVACNYPIEPWELAPASQDRTFNAAFQHFGQALALGTLPTQIIQNHDYFPHVFNGGSFLEQVIMVFVNNLLVDA DGLVVNEQAALERATWCLLRWIDRSVVLDPPITPWEINC
Sequences:
>Translated_199_residues MQYNRIEADLREDAWYFGFYLGNSTLLAFYHDADIFDEDYAEFLLANRHVFAASFAVFSNNCLTPHPSDQSALTRAATWV AQSMLPTVACNYPIEPWELAPASQDRTFNAAFQHFGQALALGTLPTQIIQNHDYFPHVFNGGSFLEQVIMVFVNNLLVDA DGLVVNEQAALERATWCLLRWIDRSVVLDPPITPWEINC >Mature_199_residues MQYNRIEADLREDAWYFGFYLGNSTLLAFYHDADIFDEDYAEFLLANRHVFAASFAVFSNNCLTPHPSDQSALTRAATWV AQSMLPTVACNYPIEPWELAPASQDRTFNAAFQHFGQALALGTLPTQIIQNHDYFPHVFNGGSFLEQVIMVFVNNLLVDA DGLVVNEQAALERATWCLLRWIDRSVVLDPPITPWEINC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22568; Mature: 22568
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYNRIEADLREDAWYFGFYLGNSTLLAFYHDADIFDEDYAEFLLANRHVFAASFAVFSN CCCCCCHHHHHCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCC NCLTPHPSDQSALTRAATWVAQSMLPTVACNYPIEPWELAPASQDRTFNAAFQHFGQALA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LGTLPTQIIQNHDYFPHVFNGGSFLEQVIMVFVNNLLVDADGLVVNEQAALERATWCLLR HCCHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH WIDRSVVLDPPITPWEINC HHCCCEEECCCCCCEECCC >Mature Secondary Structure MQYNRIEADLREDAWYFGFYLGNSTLLAFYHDADIFDEDYAEFLLANRHVFAASFAVFSN CCCCCCHHHHHCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCC NCLTPHPSDQSALTRAATWVAQSMLPTVACNYPIEPWELAPASQDRTFNAAFQHFGQALA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LGTLPTQIIQNHDYFPHVFNGGSFLEQVIMVFVNNLLVDADGLVVNEQAALERATWCLLR HCCHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH WIDRSVVLDPPITPWEINC HHCCCEEECCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA