| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897951
Identifier: 159897951
GI number: 159897951
Start: 1645635
End: 1646585
Strand: Direct
Name: 159897951
Synonym: Haur_1426
Alternate gene names: NA
Gene position: 1645635-1646585 (Clockwise)
Preceding gene: 159897950
Following gene: 159897953
Centisome position: 25.93
GC content: 52.16
Gene sequence:
>951_bases ATGAGTTCATTACAAGTTATTTTTGGCACAGGCCCAGCTGGTAGCACGCTTGCTGAAGAGCTTATTAGTCAAGGCCAGCG CGTTCGCTGTATCAATCGTAGTGGTAAGGCCGATCTGCCAGCAGCGGTTGAGGTCGTCGCTGGCGATTTGCTCAATCAAG GCCAAGTTAATGAGTTGTGCCAAGGTGCAAAGGTGGTTTACCACTGCGCAAACGTACATTATGCTGAACAGACCAAGATT ATGCCGCAATTTCAGCAAACGATTATGCAGGCTAGCGCCGCTGCTGGCGCTCGCTTGGTGGTGCTCGATACGCTTTACGT CTATGGTTCGAGTCAAGGCCGACCAATGACTGAGGCCACGCCATTTGCGCCGCATACGCGTAAAGGTCGCATGCGAGCTG ATTTAGTTGAAACCTATTTGGCAGCGCATCGGGCTGGTACGCTTGAAGTCACGCTGGGTCGAGCTGCCGATTTCTTTGGG CCGCGTGTGCTCAACTCAAGCTTAGGCGATCGGGTGTTTCCGATGCTGTTGCAGCACAAACCAGCTCAATTGTTGGGCAA TATCGATTTGCCGCATAGTTTTAGCTATATCGGCGATGTCGCCCGTGGCTTGGCATTGTTGGGCCAACATCCGGCGGCGC TAGGCCAAGCTTGGCATTTGCCCGTCATGCCAGCATTAACCCAACGCGCCATGCTCCAAACAATCGGCACATTGTTGGAC TACCCGGTGCGCAGCATTGCTTTGCCTAAAATGGCGATTCAGGCGTTTGGCCTGATGGATTCGTTTATGCGCGAGTTTGT TGAGATGTTCTATCAATATACTGAGCCACAAATTGTCGATGCCCAAGCGATCGAACGCCAACTTGGCTTGGCTGCCACGC CTTTGGAGCAAGCGTTGCAGACAACGATTAATTGGTATCGTGGTCAAAATCAGCAAAAAGCCGCTGCCTAA
Upstream 100 bases:
>100_bases CCCAAGCCTTGTTACAGGGCTTATTAATGACCAATTCGTAATTTTTTTGAACCTTATCGAACAATGTTCGATTATTGATT ATTGTACAAGGAGTATAACC
Downstream 100 bases:
>100_bases ATGTGGCAACGGCCTTGAAAACAATCTGATCGTGAAATTATTGGCGGCTTTGCCATTCGCCAGCAACGCTGCGCCGGAAG TGATCAGCGGGCTTGAGTTC
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Sugar Dehydratase/Epimerase; Nucleoside-Diphosphate-Sugar Epimerases; UDP-Glucose 4-Epimerase; Saccharopine Dehydrogenase Related Protein; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase; Saccharopine Dehydrogenase; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSSLQVIFGTGPAGSTLAEELISQGQRVRCINRSGKADLPAAVEVVAGDLLNQGQVNELCQGAKVVYHCANVHYAEQTKI MPQFQQTIMQASAAAGARLVVLDTLYVYGSSQGRPMTEATPFAPHTRKGRMRADLVETYLAAHRAGTLEVTLGRAADFFG PRVLNSSLGDRVFPMLLQHKPAQLLGNIDLPHSFSYIGDVARGLALLGQHPAALGQAWHLPVMPALTQRAMLQTIGTLLD YPVRSIALPKMAIQAFGLMDSFMREFVEMFYQYTEPQIVDAQAIERQLGLAATPLEQALQTTINWYRGQNQQKAAA
Sequences:
>Translated_316_residues MSSLQVIFGTGPAGSTLAEELISQGQRVRCINRSGKADLPAAVEVVAGDLLNQGQVNELCQGAKVVYHCANVHYAEQTKI MPQFQQTIMQASAAAGARLVVLDTLYVYGSSQGRPMTEATPFAPHTRKGRMRADLVETYLAAHRAGTLEVTLGRAADFFG PRVLNSSLGDRVFPMLLQHKPAQLLGNIDLPHSFSYIGDVARGLALLGQHPAALGQAWHLPVMPALTQRAMLQTIGTLLD YPVRSIALPKMAIQAFGLMDSFMREFVEMFYQYTEPQIVDAQAIERQLGLAATPLEQALQTTINWYRGQNQQKAAA >Mature_315_residues SSLQVIFGTGPAGSTLAEELISQGQRVRCINRSGKADLPAAVEVVAGDLLNQGQVNELCQGAKVVYHCANVHYAEQTKIM PQFQQTIMQASAAAGARLVVLDTLYVYGSSQGRPMTEATPFAPHTRKGRMRADLVETYLAAHRAGTLEVTLGRAADFFGP RVLNSSLGDRVFPMLLQHKPAQLLGNIDLPHSFSYIGDVARGLALLGQHPAALGQAWHLPVMPALTQRAMLQTIGTLLDY PVRSIALPKMAIQAFGLMDSFMREFVEMFYQYTEPQIVDAQAIERQLGLAATPLEQALQTTINWYRGQNQQKAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34433; Mature: 34302
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLQVIFGTGPAGSTLAEELISQGQRVRCINRSGKADLPAAVEVVAGDLLNQGQVNELC CCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHH QGAKVVYHCANVHYAEQTKIMPQFQQTIMQASAAAGARLVVLDTLYVYGSSQGRPMTEAT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHEEECCCCCCCCCCC PFAPHTRKGRMRADLVETYLAAHRAGTLEVTLGRAADFFGPRVLNSSLGDRVFPMLLQHK CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHCC PAQLLGNIDLPHSFSYIGDVARGLALLGQHPAALGQAWHLPVMPALTQRAMLQTIGTLLD CHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH YPVRSIALPKMAIQAFGLMDSFMREFVEMFYQYTEPQIVDAQAIERQLGLAATPLEQALQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCHHHHHHH TTINWYRGQNQQKAAA HHHHHHHCCCCHHCCC >Mature Secondary Structure SSLQVIFGTGPAGSTLAEELISQGQRVRCINRSGKADLPAAVEVVAGDLLNQGQVNELC CCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHH QGAKVVYHCANVHYAEQTKIMPQFQQTIMQASAAAGARLVVLDTLYVYGSSQGRPMTEAT HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHEEECCCCCCCCCCC PFAPHTRKGRMRADLVETYLAAHRAGTLEVTLGRAADFFGPRVLNSSLGDRVFPMLLQHK CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHCC PAQLLGNIDLPHSFSYIGDVARGLALLGQHPAALGQAWHLPVMPALTQRAMLQTIGTLLD CHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH YPVRSIALPKMAIQAFGLMDSFMREFVEMFYQYTEPQIVDAQAIERQLGLAATPLEQALQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCHHHHHHH TTINWYRGQNQQKAAA HHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA