Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897951

Identifier: 159897951

GI number: 159897951

Start: 1645635

End: 1646585

Strand: Direct

Name: 159897951

Synonym: Haur_1426

Alternate gene names: NA

Gene position: 1645635-1646585 (Clockwise)

Preceding gene: 159897950

Following gene: 159897953

Centisome position: 25.93

GC content: 52.16

Gene sequence:

>951_bases
ATGAGTTCATTACAAGTTATTTTTGGCACAGGCCCAGCTGGTAGCACGCTTGCTGAAGAGCTTATTAGTCAAGGCCAGCG
CGTTCGCTGTATCAATCGTAGTGGTAAGGCCGATCTGCCAGCAGCGGTTGAGGTCGTCGCTGGCGATTTGCTCAATCAAG
GCCAAGTTAATGAGTTGTGCCAAGGTGCAAAGGTGGTTTACCACTGCGCAAACGTACATTATGCTGAACAGACCAAGATT
ATGCCGCAATTTCAGCAAACGATTATGCAGGCTAGCGCCGCTGCTGGCGCTCGCTTGGTGGTGCTCGATACGCTTTACGT
CTATGGTTCGAGTCAAGGCCGACCAATGACTGAGGCCACGCCATTTGCGCCGCATACGCGTAAAGGTCGCATGCGAGCTG
ATTTAGTTGAAACCTATTTGGCAGCGCATCGGGCTGGTACGCTTGAAGTCACGCTGGGTCGAGCTGCCGATTTCTTTGGG
CCGCGTGTGCTCAACTCAAGCTTAGGCGATCGGGTGTTTCCGATGCTGTTGCAGCACAAACCAGCTCAATTGTTGGGCAA
TATCGATTTGCCGCATAGTTTTAGCTATATCGGCGATGTCGCCCGTGGCTTGGCATTGTTGGGCCAACATCCGGCGGCGC
TAGGCCAAGCTTGGCATTTGCCCGTCATGCCAGCATTAACCCAACGCGCCATGCTCCAAACAATCGGCACATTGTTGGAC
TACCCGGTGCGCAGCATTGCTTTGCCTAAAATGGCGATTCAGGCGTTTGGCCTGATGGATTCGTTTATGCGCGAGTTTGT
TGAGATGTTCTATCAATATACTGAGCCACAAATTGTCGATGCCCAAGCGATCGAACGCCAACTTGGCTTGGCTGCCACGC
CTTTGGAGCAAGCGTTGCAGACAACGATTAATTGGTATCGTGGTCAAAATCAGCAAAAAGCCGCTGCCTAA

Upstream 100 bases:

>100_bases
CCCAAGCCTTGTTACAGGGCTTATTAATGACCAATTCGTAATTTTTTTGAACCTTATCGAACAATGTTCGATTATTGATT
ATTGTACAAGGAGTATAACC

Downstream 100 bases:

>100_bases
ATGTGGCAACGGCCTTGAAAACAATCTGATCGTGAAATTATTGGCGGCTTTGCCATTCGCCAGCAACGCTGCGCCGGAAG
TGATCAGCGGGCTTGAGTTC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Sugar Dehydratase/Epimerase; Nucleoside-Diphosphate-Sugar Epimerases; UDP-Glucose 4-Epimerase; Saccharopine Dehydrogenase Related Protein; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase; Saccharopine Dehydrogenase; NAD Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSSLQVIFGTGPAGSTLAEELISQGQRVRCINRSGKADLPAAVEVVAGDLLNQGQVNELCQGAKVVYHCANVHYAEQTKI
MPQFQQTIMQASAAAGARLVVLDTLYVYGSSQGRPMTEATPFAPHTRKGRMRADLVETYLAAHRAGTLEVTLGRAADFFG
PRVLNSSLGDRVFPMLLQHKPAQLLGNIDLPHSFSYIGDVARGLALLGQHPAALGQAWHLPVMPALTQRAMLQTIGTLLD
YPVRSIALPKMAIQAFGLMDSFMREFVEMFYQYTEPQIVDAQAIERQLGLAATPLEQALQTTINWYRGQNQQKAAA

Sequences:

>Translated_316_residues
MSSLQVIFGTGPAGSTLAEELISQGQRVRCINRSGKADLPAAVEVVAGDLLNQGQVNELCQGAKVVYHCANVHYAEQTKI
MPQFQQTIMQASAAAGARLVVLDTLYVYGSSQGRPMTEATPFAPHTRKGRMRADLVETYLAAHRAGTLEVTLGRAADFFG
PRVLNSSLGDRVFPMLLQHKPAQLLGNIDLPHSFSYIGDVARGLALLGQHPAALGQAWHLPVMPALTQRAMLQTIGTLLD
YPVRSIALPKMAIQAFGLMDSFMREFVEMFYQYTEPQIVDAQAIERQLGLAATPLEQALQTTINWYRGQNQQKAAA
>Mature_315_residues
SSLQVIFGTGPAGSTLAEELISQGQRVRCINRSGKADLPAAVEVVAGDLLNQGQVNELCQGAKVVYHCANVHYAEQTKIM
PQFQQTIMQASAAAGARLVVLDTLYVYGSSQGRPMTEATPFAPHTRKGRMRADLVETYLAAHRAGTLEVTLGRAADFFGP
RVLNSSLGDRVFPMLLQHKPAQLLGNIDLPHSFSYIGDVARGLALLGQHPAALGQAWHLPVMPALTQRAMLQTIGTLLDY
PVRSIALPKMAIQAFGLMDSFMREFVEMFYQYTEPQIVDAQAIERQLGLAATPLEQALQTTINWYRGQNQQKAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34433; Mature: 34302

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLQVIFGTGPAGSTLAEELISQGQRVRCINRSGKADLPAAVEVVAGDLLNQGQVNELC
CCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHH
QGAKVVYHCANVHYAEQTKIMPQFQQTIMQASAAAGARLVVLDTLYVYGSSQGRPMTEAT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHEEECCCCCCCCCCC
PFAPHTRKGRMRADLVETYLAAHRAGTLEVTLGRAADFFGPRVLNSSLGDRVFPMLLQHK
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHCC
PAQLLGNIDLPHSFSYIGDVARGLALLGQHPAALGQAWHLPVMPALTQRAMLQTIGTLLD
CHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
YPVRSIALPKMAIQAFGLMDSFMREFVEMFYQYTEPQIVDAQAIERQLGLAATPLEQALQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCHHHHHHH
TTINWYRGQNQQKAAA
HHHHHHHCCCCHHCCC
>Mature Secondary Structure 
SSLQVIFGTGPAGSTLAEELISQGQRVRCINRSGKADLPAAVEVVAGDLLNQGQVNELC
CCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHH
QGAKVVYHCANVHYAEQTKIMPQFQQTIMQASAAAGARLVVLDTLYVYGSSQGRPMTEAT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHEEECCCCCCCCCCC
PFAPHTRKGRMRADLVETYLAAHRAGTLEVTLGRAADFFGPRVLNSSLGDRVFPMLLQHK
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHCC
PAQLLGNIDLPHSFSYIGDVARGLALLGQHPAALGQAWHLPVMPALTQRAMLQTIGTLLD
CHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
YPVRSIALPKMAIQAFGLMDSFMREFVEMFYQYTEPQIVDAQAIERQLGLAATPLEQALQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCCCCCHHHHHHH
TTINWYRGQNQQKAAA
HHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA