Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is hslJ [C]

Identifier: 159897949

GI number: 159897949

Start: 1644154

End: 1644612

Strand: Direct

Name: hslJ [C]

Synonym: Haur_1424

Alternate gene names: 159897949

Gene position: 1644154-1644612 (Clockwise)

Preceding gene: 159897943

Following gene: 159897950

Centisome position: 25.91

GC content: 51.2

Gene sequence:

>459_bases
ATGCGCCGCACGTTTACGATATTTGCTCTCTTAACCGTTTTGGCTGGCTGTGGTAGTGCGACTACGCCAACCGCTATGCC
GACCAACGTGCCCACGGTTGATGTCGCCCAGCCTGGTGCTGCTGGCTTGGCTGGCTCAAGCTGGAATGTTTTGCAAATCA
ATGGTCAACCAATTAAAGGCACGCAAGCCTTGCCCTTAACGTTTGAATTGGATGGTCGTGCTTCAGGCCATAGTGGTTGT
AATGGCTATTCGGGCGAGGCCAACGTTGCTGGCGAGCAGTTGACCATCGGCCCTGTCATGTCAACCAAGATGGCCTGTGC
TGAAAACGAATTGCAACAACAAGAAACCACCTTGTTCCAAGCGCTCGAAAAAGTAACCAGCTATACGATTACTGGCGATA
AACTGAGTTTGCTTGATGCGAGTGGTACGGTTGTGGTCGAATTGGTGCAACAAGCCTAA

Upstream 100 bases:

>100_bases
TGTGGCCTATTATAGCACAGCGGTATTAATTTCTTAGGGAACTTTTGGCCGAGTTTTAACGTTTTGGCTGTATAACAGAT
ACTTTTTTGGAGGATACCCA

Downstream 100 bases:

>100_bases
ATTGATGCCCTCACCCCCCAACCTTACAAGGGTAGGTTTTTAACAATGGTTGGGAGGGATTCGCCGTCGATATTCATACC
CTGACCTCCTGACCCCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRRTFTIFALLTVLAGCGSATTPTAMPTNVPTVDVAQPGAAGLAGSSWNVLQINGQPIKGTQALPLTFELDGRASGHSGC
NGYSGEANVAGEQLTIGPVMSTKMACAENELQQQETTLFQALEKVTSYTITGDKLSLLDASGTVVVELVQQA

Sequences:

>Translated_152_residues
MRRTFTIFALLTVLAGCGSATTPTAMPTNVPTVDVAQPGAAGLAGSSWNVLQINGQPIKGTQALPLTFELDGRASGHSGC
NGYSGEANVAGEQLTIGPVMSTKMACAENELQQQETTLFQALEKVTSYTITGDKLSLLDASGTVVVELVQQA
>Mature_152_residues
MRRTFTIFALLTVLAGCGSATTPTAMPTNVPTVDVAQPGAAGLAGSSWNVLQINGQPIKGTQALPLTFELDGRASGHSGC
NGYSGEANVAGEQLTIGPVMSTKMACAENELQQQETTLFQALEKVTSYTITGDKLSLLDASGTVVVELVQQA

Specific function: Unknown

COG id: COG3187

COG function: function code O; Heat shock protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15717; Mature: 15717

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTFTIFALLTVLAGCGSATTPTAMPTNVPTVDVAQPGAAGLAGSSWNVLQINGQPIKG
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCC
TQALPLTFELDGRASGHSGCNGYSGEANVAGEQLTIGPVMSTKMACAENELQQQETTLFQ
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
ALEKVTSYTITGDKLSLLDASGTVVVELVQQA
HHHHHHHEEECCCEEEEEECCCCEEEEEECCC
>Mature Secondary Structure
MRRTFTIFALLTVLAGCGSATTPTAMPTNVPTVDVAQPGAAGLAGSSWNVLQINGQPIKG
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCC
TQALPLTFELDGRASGHSGCNGYSGEANVAGEQLTIGPVMSTKMACAENELQQQETTLFQ
CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH
ALEKVTSYTITGDKLSLLDASGTVVVELVQQA
HHHHHHHEEECCCEEEEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA