| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yqiK [C]
Identifier: 159897938
GI number: 159897938
Start: 1628208
End: 1630442
Strand: Direct
Name: yqiK [C]
Synonym: Haur_1413
Alternate gene names: 159897938
Gene position: 1628208-1630442 (Clockwise)
Preceding gene: 159897937
Following gene: 159897939
Centisome position: 25.65
GC content: 49.66
Gene sequence:
>2235_bases ATGGAACAGATTGCAGTGTTAGTCGGGATTACCCTACTGGTCGTGATTCTGTTGGTTGTGGTGTTTTTTGCCTTGGTCAA CCATTTTTATGTGAAAGCACCAGCCGACCGTACCTATGTGCGAACTGGTGGCAGCAAACCAAAGGTTGTTTTCAATGGTG GTAGCTGGGTGATTCCAGCTTTTCATGAAATTACCTGGGTTGATTTGCGCACGATGGATATTGATGTCGAGCGGACGGAA GCCAATGCGTTGCTGACGATCGACCCCCAATATGCCGATATTCGGGCAATTTTCTTTATCAAAGTTAATCCAATTGCTGA AGATATTGAACGCGCTGCCCGTACCATCGGTGGCAAAGAAGTTAATACCGATAGTGTAAAACGTTTGGTTGAAAGTAAAT TGGAAGGTGCACTGCGCGACGTAGCTGCTACCTTTACCTTGATGTCATTGCACCAAGAGCGGGAAAAATTTGTTGAGCGA GTGCAAAATTTGGTGCGTAGCGATTTAGCTGAAAATGGTTTGGTGCTTGAAGCAGTTTCAATTACCACATTAAAGAGTGC TCGCCAAGGGAGTTTTGGCACTGATGATGTGTTCGGGGCGCAAGTGGCGCGGGCCAATGCCGAAGTTATTCAGCAAGCGC TCAAACAACGCAACGAAATTGATCAAATGACCCAAACTGAAATTGCCAAGCGCAATGCTACTGCTGAGCAAGAACGCAAT ACGATCGAGCGCCAAAAGCAACTTGAAATTGCTCGACGTAATGCTTCGACTTCGCAAGAACAAAATGATATTGAACGCTC CAGCGAATTGGAAATTACGCGGCGTAATGCTGATGTTGATCAAGAAAAATTGAATTTAGAGCGAAACCTATCGCAAGCTC GCGCCACCCAACAACGTGAAATTTTGATTCGCGAATCTGAGGAACGCACTGCTGCTGAGCGAGTGGCTTACGAACAGCAA CAAGCTGCTGAATTAAGTCGGGTTGAAAAAGAACGCACGATTGCCGAAGCTGAAAAGCTTAAAGAACAAGCGGTCATGTT GGCCGAACAACGCAAGCAACAAGCGATTCAGTTGGCCGAACAAGAACGTCAGCGCGAAGTGCAGCGCAGTCAAGTTCTGC GTGAACAAGCTGTCCAAGTGGCCGACCGCGAACGCCAAGTGGCCTTGGCTCAAGAGCAAGCCAAGCTCGAACAAGCAGAA AAAGAACGTTTGGCAATTGCTGCCGAACGTGAAGTAGCCGAGCAAGGCGTGGTTACGGTGCAAGAACGTGCTGCCGCTGA ACGTGAAGCGCAAATTCAAATTATCAATGCTGAACGTGATGCCAAGCGCGAAATTATCAATCGTAAAAATGAAGTTGAGC TTGAAACCTTCCGCCAAATTAAGCAGGCCGAAGCCGATGCTGAAGCCTTGAACAAAAAGGCAACCGCCGAAGCAAGTGCC GCAATCAAGATGGCCGAAGCTCGCCGTACCGAAGCCCAAGCCATGTCCGATGCGGAAATTCTGCGGGCTGAAGCAACTAA AGCAACCGTTGCTTCCCAAGGTTTGGCCGAAGCTGAAGTGATCAAGGCCAAAGCTGATGCCGCCCGTGTCGAAGCTGAGG CAATTCGTGAGCGTGGTTTGGCGGAAGCTGAAGCCGCTCGCGCCAAAGCCCTCGCCGAAGCCGAAGGTCAAAAAGCCTTG GCCGAAGCTTTGGCTGCTCACGCTGGGGTAGCCCAAGAGCTAGAACTTGAACGGATTCGCATGCACGCCCAAGTTGAAAT TGGCGTGGCTCAAGCCAAAGCCATGGGCGAAGCGATGGCAGCGATGGACTTCAAGCTTTATGGTACGCCCGAAACTGCTC AACAAATTCTGCGCATGATAGGTTTGGCCGACGGCGTTGGCAGTTTGATCAACACCGCACCTGCTCCATTAAAAGAGCTT GGCAATCGTTTGATCAACCGTGTGTTGCCAGCGAATGGCAATGGCGATGCTGAAAAATCGGCTAGCAACGACAATGGCTT GAATCTGACCGCTGCCCAACCAGTGTTGCGCGAAGCAGCCTTGATTGCCAGCCAATATTTGAGTGCCGATGAGTTGCAAA CTTTGACGGTTGGTGCAGCCCTCGAACAAGTCTTGGGTGTCGCTAGTGAAGAGCAACAAGCAGTGTTACATAAAGTCCAG GGTATGCTGCAATTGATGCCCCAATTGGCTGACCAACCATTGAGCAGTGTCTTGATGTTGGTGCAAAATAGCTAA
Upstream 100 bases:
>100_bases TAGCTTTTTGAAAGAAGGAACATGTTACGAGGGAACGTCTCTAGGATGGCTGTTTGAGTAGAGTATTGCTGCCATCCTGG GTTATAAGGAGTTATTGATA
Downstream 100 bases:
>100_bases GTATAGCACTCGATTGGCTGCTTGTGTTGATTCAGCACAAGCAGCCAATTGCTGTTTAAGCATTGAGTTGCTCATGTCAA GCTGTTAGAATCGCGGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 744; Mature: 744
Protein sequence:
>744_residues MEQIAVLVGITLLVVILLVVVFFALVNHFYVKAPADRTYVRTGGSKPKVVFNGGSWVIPAFHEITWVDLRTMDIDVERTE ANALLTIDPQYADIRAIFFIKVNPIAEDIERAARTIGGKEVNTDSVKRLVESKLEGALRDVAATFTLMSLHQEREKFVER VQNLVRSDLAENGLVLEAVSITTLKSARQGSFGTDDVFGAQVARANAEVIQQALKQRNEIDQMTQTEIAKRNATAEQERN TIERQKQLEIARRNASTSQEQNDIERSSELEITRRNADVDQEKLNLERNLSQARATQQREILIRESEERTAAERVAYEQQ QAAELSRVEKERTIAEAEKLKEQAVMLAEQRKQQAIQLAEQERQREVQRSQVLREQAVQVADRERQVALAQEQAKLEQAE KERLAIAAEREVAEQGVVTVQERAAAEREAQIQIINAERDAKREIINRKNEVELETFRQIKQAEADAEALNKKATAEASA AIKMAEARRTEAQAMSDAEILRAEATKATVASQGLAEAEVIKAKADAARVEAEAIRERGLAEAEAARAKALAEAEGQKAL AEALAAHAGVAQELELERIRMHAQVEIGVAQAKAMGEAMAAMDFKLYGTPETAQQILRMIGLADGVGSLINTAPAPLKEL GNRLINRVLPANGNGDAEKSASNDNGLNLTAAQPVLREAALIASQYLSADELQTLTVGAALEQVLGVASEEQQAVLHKVQ GMLQLMPQLADQPLSSVLMLVQNS
Sequences:
>Translated_744_residues MEQIAVLVGITLLVVILLVVVFFALVNHFYVKAPADRTYVRTGGSKPKVVFNGGSWVIPAFHEITWVDLRTMDIDVERTE ANALLTIDPQYADIRAIFFIKVNPIAEDIERAARTIGGKEVNTDSVKRLVESKLEGALRDVAATFTLMSLHQEREKFVER VQNLVRSDLAENGLVLEAVSITTLKSARQGSFGTDDVFGAQVARANAEVIQQALKQRNEIDQMTQTEIAKRNATAEQERN TIERQKQLEIARRNASTSQEQNDIERSSELEITRRNADVDQEKLNLERNLSQARATQQREILIRESEERTAAERVAYEQQ QAAELSRVEKERTIAEAEKLKEQAVMLAEQRKQQAIQLAEQERQREVQRSQVLREQAVQVADRERQVALAQEQAKLEQAE KERLAIAAEREVAEQGVVTVQERAAAEREAQIQIINAERDAKREIINRKNEVELETFRQIKQAEADAEALNKKATAEASA AIKMAEARRTEAQAMSDAEILRAEATKATVASQGLAEAEVIKAKADAARVEAEAIRERGLAEAEAARAKALAEAEGQKAL AEALAAHAGVAQELELERIRMHAQVEIGVAQAKAMGEAMAAMDFKLYGTPETAQQILRMIGLADGVGSLINTAPAPLKEL GNRLINRVLPANGNGDAEKSASNDNGLNLTAAQPVLREAALIASQYLSADELQTLTVGAALEQVLGVASEEQQAVLHKVQ GMLQLMPQLADQPLSSVLMLVQNS >Mature_744_residues MEQIAVLVGITLLVVILLVVVFFALVNHFYVKAPADRTYVRTGGSKPKVVFNGGSWVIPAFHEITWVDLRTMDIDVERTE ANALLTIDPQYADIRAIFFIKVNPIAEDIERAARTIGGKEVNTDSVKRLVESKLEGALRDVAATFTLMSLHQEREKFVER VQNLVRSDLAENGLVLEAVSITTLKSARQGSFGTDDVFGAQVARANAEVIQQALKQRNEIDQMTQTEIAKRNATAEQERN TIERQKQLEIARRNASTSQEQNDIERSSELEITRRNADVDQEKLNLERNLSQARATQQREILIRESEERTAAERVAYEQQ QAAELSRVEKERTIAEAEKLKEQAVMLAEQRKQQAIQLAEQERQREVQRSQVLREQAVQVADRERQVALAQEQAKLEQAE KERLAIAAEREVAEQGVVTVQERAAAEREAQIQIINAERDAKREIINRKNEVELETFRQIKQAEADAEALNKKATAEASA AIKMAEARRTEAQAMSDAEILRAEATKATVASQGLAEAEVIKAKADAARVEAEAIRERGLAEAEAARAKALAEAEGQKAL AEALAAHAGVAQELELERIRMHAQVEIGVAQAKAMGEAMAAMDFKLYGTPETAQQILRMIGLADGVGSLINTAPAPLKEL GNRLINRVLPANGNGDAEKSASNDNGLNLTAAQPVLREAALIASQYLSADELQTLTVGAALEQVLGVASEEQQAVLHKVQ GMLQLMPQLADQPLSSVLMLVQNS
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yuaG and E.coli yqiK [H]
Homologues:
Organism=Escherichia coli, GI1789430, Length=526, Percent_Identity=29.8479087452471, Blast_Score=159, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 81950; Mature: 81950
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQIAVLVGITLLVVILLVVVFFALVNHFYVKAPADRTYVRTGGSKPKVVFNGGSWVIPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCEEEECCCCEEEEC FHEITWVDLRTMDIDVERTEANALLTIDPQYADIRAIFFIKVNPIAEDIERAARTIGGKE HHCEEEEEEEEEEEEEEECCCCEEEEECCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCC VNTDSVKRLVESKLEGALRDVAATFTLMSLHQEREKFVERVQNLVRSDLAENGLVLEAVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHH ITTLKSARQGSFGTDDVFGAQVARANAEVIQQALKQRNEIDQMTQTEIAKRNATAEQERN HHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TIERQKQLEIARRNASTSQEQNDIERSSELEITRRNADVDQEKLNLERNLSQARATQQRE HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH ILIRESEERTAAERVAYEQQQAAELSRVEKERTIAEAEKLKEQAVMLAEQRKQQAIQLAE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QERQREVQRSQVLREQAVQVADRERQVALAQEQAKLEQAEKERLAIAAEREVAEQGVVTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QERAAAEREAQIQIINAERDAKREIINRKNEVELETFRQIKQAEADAEALNKKATAEASA HHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIKMAEARRTEAQAMSDAEILRAEATKATVASQGLAEAEVIKAKADAARVEAEAIRERGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC AEAEAARAKALAEAEGQKALAEALAAHAGVAQELELERIRMHAQVEIGVAQAKAMGEAMA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDFKLYGTPETAQQILRMIGLADGVGSLINTAPAPLKELGNRLINRVLPANGNGDAEKS HHCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC ASNDNGLNLTAAQPVLREAALIASQYLSADELQTLTVGAALEQVLGVASEEQQAVLHKVQ CCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GMLQLMPQLADQPLSSVLMLVQNS HHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MEQIAVLVGITLLVVILLVVVFFALVNHFYVKAPADRTYVRTGGSKPKVVFNGGSWVIPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCCEEEECCCCEEEEC FHEITWVDLRTMDIDVERTEANALLTIDPQYADIRAIFFIKVNPIAEDIERAARTIGGKE HHCEEEEEEEEEEEEEEECCCCEEEEECCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCC VNTDSVKRLVESKLEGALRDVAATFTLMSLHQEREKFVERVQNLVRSDLAENGLVLEAVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHH ITTLKSARQGSFGTDDVFGAQVARANAEVIQQALKQRNEIDQMTQTEIAKRNATAEQERN HHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TIERQKQLEIARRNASTSQEQNDIERSSELEITRRNADVDQEKLNLERNLSQARATQQRE HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH ILIRESEERTAAERVAYEQQQAAELSRVEKERTIAEAEKLKEQAVMLAEQRKQQAIQLAE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QERQREVQRSQVLREQAVQVADRERQVALAQEQAKLEQAEKERLAIAAEREVAEQGVVTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH QERAAAEREAQIQIINAERDAKREIINRKNEVELETFRQIKQAEADAEALNKKATAEASA HHHHHHCCCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIKMAEARRTEAQAMSDAEILRAEATKATVASQGLAEAEVIKAKADAARVEAEAIRERGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC AEAEAARAKALAEAEGQKALAEALAAHAGVAQELELERIRMHAQVEIGVAQAKAMGEAMA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMDFKLYGTPETAQQILRMIGLADGVGSLINTAPAPLKELGNRLINRVLPANGNGDAEKS HHCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC ASNDNGLNLTAAQPVLREAALIASQYLSADELQTLTVGAALEQVLGVASEEQQAVLHKVQ CCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GMLQLMPQLADQPLSSVLMLVQNS HHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]