| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897932
Identifier: 159897932
GI number: 159897932
Start: 1621736
End: 1621978
Strand: Direct
Name: 159897932
Synonym: Haur_1406
Alternate gene names: NA
Gene position: 1621736-1621978 (Clockwise)
Preceding gene: 159897931
Following gene: 159897933
Centisome position: 25.55
GC content: 53.09
Gene sequence:
>243_bases ATGAGCACCCTGATCAATCTGGTGGGCACGCGGCTGGAGATTCAAGCGCAGCTGCGCAACGGTAATATCGCGGCGGCTCG CAACCTGATCACCAATCGCATGATTTCGCCATGGTTGTTGGCCACGTGGTTGACTCCAGCGCAACAAGCGCTCCTGACTG ATCAATCACCGCCAATGATGAACCATTCTCTTGGAGCAGATCCGCTATATCAAGCAAACCAATTGATGTTTGCGCTCAGA TGA
Upstream 100 bases:
>100_bases TGGCCCAAGCCTTGTTGGTGCTGCGTGATGCGGGCTATATCGAATTTACGCCCAAGCGCTGCGGCTGCCGCAAAATTATT ATTCCCTTGCTGGAGGCCGC
Downstream 100 bases:
>100_bases TCGTGAGGTGTTTGATGGCCCTGAATCCTGATGAGATTGATGTGACCGCTGATCCGGCATTGGTTGCGTGGCTCCACGCT GGAGCGGAATGGATTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSTLINLVGTRLEIQAQLRNGNIAAARNLITNRMISPWLLATWLTPAQQALLTDQSPPMMNHSLGADPLYQANQLMFALR
Sequences:
>Translated_80_residues MSTLINLVGTRLEIQAQLRNGNIAAARNLITNRMISPWLLATWLTPAQQALLTDQSPPMMNHSLGADPLYQANQLMFALR >Mature_79_residues STLINLVGTRLEIQAQLRNGNIAAARNLITNRMISPWLLATWLTPAQQALLTDQSPPMMNHSLGADPLYQANQLMFALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8902; Mature: 8770
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLINLVGTRLEIQAQLRNGNIAAARNLITNRMISPWLLATWLTPAQQALLTDQSPPMM CCHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCCCCCC NHSLGADPLYQANQLMFALR CCCCCCCCCCCCCCEEEECC >Mature Secondary Structure STLINLVGTRLEIQAQLRNGNIAAARNLITNRMISPWLLATWLTPAQQALLTDQSPPMM CHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHCCCCCCCC NHSLGADPLYQANQLMFALR CCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA