Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159897920

Identifier: 159897920

GI number: 159897920

Start: 1611660

End: 1612907

Strand: Direct

Name: 159897920

Synonym: Haur_1394

Alternate gene names: NA

Gene position: 1611660-1612907 (Clockwise)

Preceding gene: 159897917

Following gene: 159897926

Centisome position: 25.39

GC content: 46.96

Gene sequence:

>1248_bases
ATGCGACGTTTCCTTATTGCTTTGGGCGTGCTCGCACTACTTGGGCTACCACGGGCGGTATCTGCTCACGACATGTGTTT
TCCCTCGGACAAAACACCGTACTGCCTTCCTGATCCGTTTAGCGATTATTGGGAATTGAACGGTGGGTTGCCCGTTTTTG
GCTATCCAGTGACAGCCAAGGCCGATGAACTCAATAAAGACACGGGCAAAATGCATCCAACCCAGTGGCTTGAGCGGAAT
CGGCTTGAATATCACAACGAAAATAAAGGAACGGCCTATGAAGTGTTGCTGGGATTGTTGGGAAAGGAACGCCTTGCCCA
ATTAGGTCGTAATCCTGCGAGTGAGCCGCGTGAAGCCGGGGCCAAAGCTGGGTGTTTGTGGTTTGAACAAACGGGACACA
ACATCTGCAATATTGAAGGTACGGTGGGCTTTAAGACCTATTGGGAAACCCATGGCTTGAAGATCAATGGCATGGACAAG
TTTAGCCAATCGTTGCAACTGTTTGGACTTCCATTAACGGAACCAAAGATGGAAACCAATAGTGCAGGCGATAGGGTGTT
GACGCAATGGTTTGAGCGTGCCCGCTTTGAATGGCATCCCAAGAATGGTGCTGAATATAAGGTGCTTTTAGGTTTGCTTG
GCAAAGAAGTTCATGATAATGCTGGCTCACCTCCGCCAGCCACCCTTGCGATTGTTAGCCACCGCACGTATGTTGATAGT
ATCGACTTCCGGTGGATTGTTGGTGAAGTTGTGAATAATACAGCGAGCAATCAGCAATTTGTTAAGGTTATTGCGAATCT
TTATGATGCTGGGAGTAATCTTGTTGGTACTGAGACTGGCTATACCATCCTCGATATTGTTAAGGCTGGTACGAAATCAC
CGTTTAGTATTCTGATTCTTGAGCCTCCAGCGAACTTTGATCATTACACGCTACAAATTGAGGCCCGTGAAACCACAACT
GCACCCCTCGATACATTCGCCATCTTAAGTTTTGGCAATCGTGATTCCGAGATTGGCAATTACCGCTATGTGTATGGTGA
AGTCCGCAATGATACGGGTGTTCCAGTGAAATTTACTAAGATAGCGATTACCTGTTACACCAAAGAATCAACGGTTCAAC
AAGTAGGGTTTGGCTACACATCGCTGCAAAATATTGCTGTTGGGCAGTCCTCTGCATTTGAAATATTGCTATCACAATGG
TCAGGCGTTGAGCGCTGTGAGGCGCAAGTTCAAGCCAGAAAGCAATAA

Upstream 100 bases:

>100_bases
CGATTCCAAAGATACCGCTACGCTCTACCCAACTTCTTGACGATAACAATCAACTACAACATCATGGCCTGACTGCATTT
CGTTCTAAGGAGAATCCCGA

Downstream 100 bases:

>100_bases
CTGGAGCTATTGTTGGAAAAGCCTGCTCCTAGGAGCAGGCTTTTTTGATGCCGTGTGGATCGGTGAGCCGGAGCTGGCGG
CCAGCGCTGAGCAAAAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRRFLIALGVLALLGLPRAVSAHDMCFPSDKTPYCLPDPFSDYWELNGGLPVFGYPVTAKADELNKDTGKMHPTQWLERN
RLEYHNENKGTAYEVLLGLLGKERLAQLGRNPASEPREAGAKAGCLWFEQTGHNICNIEGTVGFKTYWETHGLKINGMDK
FSQSLQLFGLPLTEPKMETNSAGDRVLTQWFERARFEWHPKNGAEYKVLLGLLGKEVHDNAGSPPPATLAIVSHRTYVDS
IDFRWIVGEVVNNTASNQQFVKVIANLYDAGSNLVGTETGYTILDIVKAGTKSPFSILILEPPANFDHYTLQIEARETTT
APLDTFAILSFGNRDSEIGNYRYVYGEVRNDTGVPVKFTKIAITCYTKESTVQQVGFGYTSLQNIAVGQSSAFEILLSQW
SGVERCEAQVQARKQ

Sequences:

>Translated_415_residues
MRRFLIALGVLALLGLPRAVSAHDMCFPSDKTPYCLPDPFSDYWELNGGLPVFGYPVTAKADELNKDTGKMHPTQWLERN
RLEYHNENKGTAYEVLLGLLGKERLAQLGRNPASEPREAGAKAGCLWFEQTGHNICNIEGTVGFKTYWETHGLKINGMDK
FSQSLQLFGLPLTEPKMETNSAGDRVLTQWFERARFEWHPKNGAEYKVLLGLLGKEVHDNAGSPPPATLAIVSHRTYVDS
IDFRWIVGEVVNNTASNQQFVKVIANLYDAGSNLVGTETGYTILDIVKAGTKSPFSILILEPPANFDHYTLQIEARETTT
APLDTFAILSFGNRDSEIGNYRYVYGEVRNDTGVPVKFTKIAITCYTKESTVQQVGFGYTSLQNIAVGQSSAFEILLSQW
SGVERCEAQVQARKQ
>Mature_415_residues
MRRFLIALGVLALLGLPRAVSAHDMCFPSDKTPYCLPDPFSDYWELNGGLPVFGYPVTAKADELNKDTGKMHPTQWLERN
RLEYHNENKGTAYEVLLGLLGKERLAQLGRNPASEPREAGAKAGCLWFEQTGHNICNIEGTVGFKTYWETHGLKINGMDK
FSQSLQLFGLPLTEPKMETNSAGDRVLTQWFERARFEWHPKNGAEYKVLLGLLGKEVHDNAGSPPPATLAIVSHRTYVDS
IDFRWIVGEVVNNTASNQQFVKVIANLYDAGSNLVGTETGYTILDIVKAGTKSPFSILILEPPANFDHYTLQIEARETTT
APLDTFAILSFGNRDSEIGNYRYVYGEVRNDTGVPVKFTKIAITCYTKESTVQQVGFGYTSLQNIAVGQSSAFEILLSQW
SGVERCEAQVQARKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46185; Mature: 46185

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLIALGVLALLGLPRAVSAHDMCFPSDKTPYCLPDPFSDYWELNGGLPVFGYPVTAK
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCC
ADELNKDTGKMHPTQWLERNRLEYHNENKGTAYEVLLGLLGKERLAQLGRNPASEPREAG
HHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHCC
AKAGCLWFEQTGHNICNIEGTVGFKTYWETHGLKINGMDKFSQSLQLFGLPLTEPKMETN
CCCEEEEEECCCCEEEEEECCCCEEEEEECCCEEECCHHHHHHHHHHCCCCCCCCCCCCC
SAGDRVLTQWFERARFEWHPKNGAEYKVLLGLLGKEVHDNAGSPPPATLAIVSHRTYVDS
CCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCC
IDFRWIVGEVVNNTASNQQFVKVIANLYDAGSNLVGTETGYTILDIVKAGTKSPFSILIL
CCCEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHCCCCCCEEEEEE
EPPANFDHYTLQIEARETTTAPLDTFAILSFGNRDSEIGNYRYVYGEVRNDTGVPVKFTK
CCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEE
IAITCYTKESTVQQVGFGYTSLQNIAVGQSSAFEILLSQWSGVERCEAQVQARKQ
EEEEEEECHHHHHHHCCCHHHHHHEECCCCHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRRFLIALGVLALLGLPRAVSAHDMCFPSDKTPYCLPDPFSDYWELNGGLPVFGYPVTAK
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEECCCCCCC
ADELNKDTGKMHPTQWLERNRLEYHNENKGTAYEVLLGLLGKERLAQLGRNPASEPREAG
HHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCHHHCC
AKAGCLWFEQTGHNICNIEGTVGFKTYWETHGLKINGMDKFSQSLQLFGLPLTEPKMETN
CCCEEEEEECCCCEEEEEECCCCEEEEEECCCEEECCHHHHHHHHHHCCCCCCCCCCCCC
SAGDRVLTQWFERARFEWHPKNGAEYKVLLGLLGKEVHDNAGSPPPATLAIVSHRTYVDS
CCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCC
IDFRWIVGEVVNNTASNQQFVKVIANLYDAGSNLVGTETGYTILDIVKAGTKSPFSILIL
CCCEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHCCCCCCEEEEEE
EPPANFDHYTLQIEARETTTAPLDTFAILSFGNRDSEIGNYRYVYGEVRNDTGVPVKFTK
CCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEE
IAITCYTKESTVQQVGFGYTSLQNIAVGQSSAFEILLSQWSGVERCEAQVQARKQ
EEEEEEECHHHHHHHCCCHHHHHHEECCCCHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA