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The map label for this gene is 159897919

Identifier: 159897919

GI number: 159897919

Start: 1609573

End: 1610727

Strand: Reverse

Name: 159897919

Synonym: Haur_1393

Alternate gene names: NA

Gene position: 1610727-1609573 (Counterclockwise)

Preceding gene: 159897921

Following gene: 159897918

Centisome position: 25.38

GC content: 51.69

Gene sequence:

>1155_bases
ATGAATCGATCACCATGGCCACACCGAATCATGACGGGCGGCATGAGCAGCCTTCTTGGTATCTTACTCGCACTCACTGT
CCTCAATCTTCAAACCTTAAGTCAGGCGACCCGCTTTTTTGAGCAGGATGATGGAATCTGGAATCCAACTCAACTCGAAC
GCGATATCTTACGGTTGCGTGCCGTTGCCAACGATGGAGGGACGAACAATCCTACCCTGGCTACTGAATATCAGCTGCGT
CACAATCTCGTGTCGAATCGTCTCGCTGCCATGAATAGCTTCTATAGCAGTGCAGCAGAATCGCAATACACCTCTATTGA
ATATCAAGCATTTACCGTGATTCAGCGTGAGTTTCAGCGTGTCCCTGCCCAAGAAATAAACGATCTTTCTTCCTTCTCTA
CCATCTTTATCAACCTCGAATTTCAGAGCCGCACGATGGTCAATGAACGGCGCATCCTCGTCCAACAGACGGCCAATCAA
CAACGCACCGCCTTTGCTCGCGTCCGCACTATCTTATTCCTGATCGGTGGTGGGATGGTGATCCAAGCTATCTTCGTAAT
CGCGAGTCTACGACGACGGTTTGATACCACCCTCGAACTGGCCTATCAGCATCTCCAAGCACGCTCAACAGAACTTGAAA
CCGCCCAGCAGGAATTACGCACAGCGCACGCAGCAAGCGAGGCCCGCAATACCCAGTTACGAGACACCCTCACGGCCTTA
GCATCGAGTAGTGCTGAACGACAAGCCCTGACCACGCAACTCAGCCAAATGACCTTTCCGGTAATCCCAATTATTCCTCA
GCGAGCAGTGCTCCCCTTGATCGGACACCTCGACAGTGCTCGGATGGATCAATTAGCATCCCTGCTCCCGCGCCAGATTG
AGCAGCAACAACTGCGGCATGTACTCATCGATCTCACGGGAGTTACAGGAATTGATCCCGATACATTGACAACACTTGCC
GATCTCCTTCAGGTTAGCCTGATTTTAGGATGCCGCCCTGTGTTTGTAGGCATTCCGCCCCATGTGGCGATGGACTTGCA
ATCCATCCGTTCTTTACCCAATGCGATTCAGAGTTTTTCCACGCTTCAAGATGCGATTGACCACATAAGATCGCCCGCCG
TGACCGTCCCTCGGCCCACACTACTTGTCCAATGA

Upstream 100 bases:

>100_bases
CCTACCTAAGAAATTGTGACTCTGTTGATAGAGCCATACTCCATAGCGGTATCATCCGTCGGTCATCCATACATCACTGC
CAGCAAGGAATGATCACCCT

Downstream 100 bases:

>100_bases
TCTAAAGGGAGGCCATATATGAAGTACTTTAACCTTGCCACTGGTACGCACGATAACCCACTCTGGGAGCACCTCCATAC
GACCAAAGAGGGAAAACCTT

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: PAS/PAC Sensor Protein

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MNRSPWPHRIMTGGMSSLLGILLALTVLNLQTLSQATRFFEQDDGIWNPTQLERDILRLRAVANDGGTNNPTLATEYQLR
HNLVSNRLAAMNSFYSSAAESQYTSIEYQAFTVIQREFQRVPAQEINDLSSFSTIFINLEFQSRTMVNERRILVQQTANQ
QRTAFARVRTILFLIGGGMVIQAIFVIASLRRRFDTTLELAYQHLQARSTELETAQQELRTAHAASEARNTQLRDTLTAL
ASSSAERQALTTQLSQMTFPVIPIIPQRAVLPLIGHLDSARMDQLASLLPRQIEQQQLRHVLIDLTGVTGIDPDTLTTLA
DLLQVSLILGCRPVFVGIPPHVAMDLQSIRSLPNAIQSFSTLQDAIDHIRSPAVTVPRPTLLVQ

Sequences:

>Translated_384_residues
MNRSPWPHRIMTGGMSSLLGILLALTVLNLQTLSQATRFFEQDDGIWNPTQLERDILRLRAVANDGGTNNPTLATEYQLR
HNLVSNRLAAMNSFYSSAAESQYTSIEYQAFTVIQREFQRVPAQEINDLSSFSTIFINLEFQSRTMVNERRILVQQTANQ
QRTAFARVRTILFLIGGGMVIQAIFVIASLRRRFDTTLELAYQHLQARSTELETAQQELRTAHAASEARNTQLRDTLTAL
ASSSAERQALTTQLSQMTFPVIPIIPQRAVLPLIGHLDSARMDQLASLLPRQIEQQQLRHVLIDLTGVTGIDPDTLTTLA
DLLQVSLILGCRPVFVGIPPHVAMDLQSIRSLPNAIQSFSTLQDAIDHIRSPAVTVPRPTLLVQ
>Mature_384_residues
MNRSPWPHRIMTGGMSSLLGILLALTVLNLQTLSQATRFFEQDDGIWNPTQLERDILRLRAVANDGGTNNPTLATEYQLR
HNLVSNRLAAMNSFYSSAAESQYTSIEYQAFTVIQREFQRVPAQEINDLSSFSTIFINLEFQSRTMVNERRILVQQTANQ
QRTAFARVRTILFLIGGGMVIQAIFVIASLRRRFDTTLELAYQHLQARSTELETAQQELRTAHAASEARNTQLRDTLTAL
ASSSAERQALTTQLSQMTFPVIPIIPQRAVLPLIGHLDSARMDQLASLLPRQIEQQQLRHVLIDLTGVTGIDPDTLTTLA
DLLQVSLILGCRPVFVGIPPHVAMDLQSIRSLPNAIQSFSTLQDAIDHIRSPAVTVPRPTLLVQ

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42916; Mature: 42916

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSPWPHRIMTGGMSSLLGILLALTVLNLQTLSQATRFFEQDDGIWNPTQLERDILRLR
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AVANDGGTNNPTLATEYQLRHNLVSNRLAAMNSFYSSAAESQYTSIEYQAFTVIQREFQR
HHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPAQEINDLSSFSTIFINLEFQSRTMVNERRILVQQTANQQRTAFARVRTILFLIGGGMV
CCHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHH
IQAIFVIASLRRRFDTTLELAYQHLQARSTELETAQQELRTAHAASEARNTQLRDTLTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSSAERQALTTQLSQMTFPVIPIIPQRAVLPLIGHLDSARMDQLASLLPRQIEQQQLRH
HCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VLIDLTGVTGIDPDTLTTLADLLQVSLILGCRPVFVGIPPHVAMDLQSIRSLPNAIQSFS
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
TLQDAIDHIRSPAVTVPRPTLLVQ
HHHHHHHHHCCCCCCCCCCCEECC
>Mature Secondary Structure
MNRSPWPHRIMTGGMSSLLGILLALTVLNLQTLSQATRFFEQDDGIWNPTQLERDILRLR
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AVANDGGTNNPTLATEYQLRHNLVSNRLAAMNSFYSSAAESQYTSIEYQAFTVIQREFQR
HHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPAQEINDLSSFSTIFINLEFQSRTMVNERRILVQQTANQQRTAFARVRTILFLIGGGMV
CCHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHH
IQAIFVIASLRRRFDTTLELAYQHLQARSTELETAQQELRTAHAASEARNTQLRDTLTAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSSAERQALTTQLSQMTFPVIPIIPQRAVLPLIGHLDSARMDQLASLLPRQIEQQQLRH
HCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VLIDLTGVTGIDPDTLTTLADLLQVSLILGCRPVFVGIPPHVAMDLQSIRSLPNAIQSFS
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH
TLQDAIDHIRSPAVTVPRPTLLVQ
HHHHHHHHHCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA