Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897917

Identifier: 159897917

GI number: 159897917

Start: 1605741

End: 1607183

Strand: Direct

Name: 159897917

Synonym: Haur_1391

Alternate gene names: NA

Gene position: 1605741-1607183 (Clockwise)

Preceding gene: 159897891

Following gene: 159897920

Centisome position: 25.3

GC content: 63.48

Gene sequence:

>1443_bases
ATGCTGGATCGCATCATACCAAACATCCTTCGTCGCTTCAAGCGCCCTGTGGCCACCGTGCCCGTGTCCGATGGTGCCCT
GCTGCCTACCCATCCCCGTCGTCCCTGCCCGCTCTCCATGCCGGATCTCCCCCCGATCATTGCCGCTGATCCCACCGCTG
CTGCGGCGCATCAGTGGCTCGCCCCCATTCCGTGGCATGCTTTGCCGCCGCTCAGTGACCGCCCTCGGCCTGGGCCACGC
CCCGCGCCGCGTGCCCCCTTTCTCGCCGCGTTCCTCCTCAAACTCGATCTCCAATTGCCCTCCATGGGGCATTTGCGCCG
CTATCTCCTGCGCCATCCCGCCCTCGTCTGGACGCTCGGCTTTCCCCTTCGGCCTGACCCTGCCGCCCCGCTCGGCTTCG
ATGTCGCCGCCAGTGTCCCGTCGCGTCGTCAGTTTGCCCGTGTCCTGCGAACCTTACCCACGCCCATGCTCGACTTCCTC
CGCATGGCGCTCGTGCGGCGCATTCGTGATGCCCTCCCCCCCGATCACCACGCCACCTTCGCCGACACCATTGCGGGCGA
TACCAAGCACATTTTGGCGTGGGTCAAAGAGAACAATCCCAACCGCTTTGCCCCGGATCGCGCGAAGAAGCAGGTGCAAC
CCCCCGGTGATCCGGACTGTCGGCTCGGAGTCAAGCGCCGGAGTAACCAGCAGCCGACCCCCACCACCGATGGTCAATCG
CCAACCCAGAGTAAGGCCGAAGCCTACTGGGGCTACGCCAGTGGCATTGTCGTCACGCGCACCCCCTTTGGCTCAATCGT
GCTTGCCGAACATACCCAACCGATCAATGCGGGCGATATGACCTATTTTGACCCGCTCATGGCGCAGGTGGAGCAGACGC
TCGGTCGCCGACCGCGTAATGGCGTGTGGGATGCCGCCTTCGACAGCCAACGGGTCTACACCTACTTCCACACGGCTGGC
GGGATGGCGGCGGTTCCGGTGCGGAAGCCCAACCAGCCACGGCAGTTTTCGCCCGACGGCGTGCCGCTGTGTGCCGCTGG
TTTGGCCATGCCGCAACAGTTTACGTATGCCATGAACACCAATGGCCCGCCACAAGAGCGGGCACGCCATCGCTGTCCGT
TGCTGTACCCGACTGCCACCGGCGAGCCATGCCCAACCAATGACAAACACTTTGCGACGGGCGGGTGTGTCACGACGATC
GGGACGCAAGTTGGGGCAACGCTGCGCTGGACGATCGATCGTGGGTCAGCGGCCTATAAAGCCTTGTATCGCGAACGCGC
GTTGGTCGAACAGATCAACAGCCAAGCGTATGCCTTGGGGATCGAATGGCCAAAACTGCGTCGTCAAAGCGCGGTCACAG
CGTGGACATCCTTAATCTATGTGGTGATTAACCTGCGCGTCGTGCATCGCCAGCAGGGAACACACGACCCGATCCACGAC
TAA

Upstream 100 bases:

>100_bases
ACACCCATGCCCCAATCGGGGTCGTTTTCGACACCAGGCGACTCTCTATCGGGTACGATACGGGTATCAGATCCAACCAT
CCCCAGAATAGGAGTCGCTG

Downstream 100 bases:

>100_bases
CGTGGCATGCGTCTCGTCCGTGAATCGCCAGGGGGATGGCTTGGATGGATGGACGGACGCAGCCACAGCGATCAGGGAAC
AGCCACAGCGGCGGATCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MLDRIIPNILRRFKRPVATVPVSDGALLPTHPRRPCPLSMPDLPPIIAADPTAAAAHQWLAPIPWHALPPLSDRPRPGPR
PAPRAPFLAAFLLKLDLQLPSMGHLRRYLLRHPALVWTLGFPLRPDPAAPLGFDVAASVPSRRQFARVLRTLPTPMLDFL
RMALVRRIRDALPPDHHATFADTIAGDTKHILAWVKENNPNRFAPDRAKKQVQPPGDPDCRLGVKRRSNQQPTPTTDGQS
PTQSKAEAYWGYASGIVVTRTPFGSIVLAEHTQPINAGDMTYFDPLMAQVEQTLGRRPRNGVWDAAFDSQRVYTYFHTAG
GMAAVPVRKPNQPRQFSPDGVPLCAAGLAMPQQFTYAMNTNGPPQERARHRCPLLYPTATGEPCPTNDKHFATGGCVTTI
GTQVGATLRWTIDRGSAAYKALYRERALVEQINSQAYALGIEWPKLRRQSAVTAWTSLIYVVINLRVVHRQQGTHDPIHD

Sequences:

>Translated_480_residues
MLDRIIPNILRRFKRPVATVPVSDGALLPTHPRRPCPLSMPDLPPIIAADPTAAAAHQWLAPIPWHALPPLSDRPRPGPR
PAPRAPFLAAFLLKLDLQLPSMGHLRRYLLRHPALVWTLGFPLRPDPAAPLGFDVAASVPSRRQFARVLRTLPTPMLDFL
RMALVRRIRDALPPDHHATFADTIAGDTKHILAWVKENNPNRFAPDRAKKQVQPPGDPDCRLGVKRRSNQQPTPTTDGQS
PTQSKAEAYWGYASGIVVTRTPFGSIVLAEHTQPINAGDMTYFDPLMAQVEQTLGRRPRNGVWDAAFDSQRVYTYFHTAG
GMAAVPVRKPNQPRQFSPDGVPLCAAGLAMPQQFTYAMNTNGPPQERARHRCPLLYPTATGEPCPTNDKHFATGGCVTTI
GTQVGATLRWTIDRGSAAYKALYRERALVEQINSQAYALGIEWPKLRRQSAVTAWTSLIYVVINLRVVHRQQGTHDPIHD
>Mature_480_residues
MLDRIIPNILRRFKRPVATVPVSDGALLPTHPRRPCPLSMPDLPPIIAADPTAAAAHQWLAPIPWHALPPLSDRPRPGPR
PAPRAPFLAAFLLKLDLQLPSMGHLRRYLLRHPALVWTLGFPLRPDPAAPLGFDVAASVPSRRQFARVLRTLPTPMLDFL
RMALVRRIRDALPPDHHATFADTIAGDTKHILAWVKENNPNRFAPDRAKKQVQPPGDPDCRLGVKRRSNQQPTPTTDGQS
PTQSKAEAYWGYASGIVVTRTPFGSIVLAEHTQPINAGDMTYFDPLMAQVEQTLGRRPRNGVWDAAFDSQRVYTYFHTAG
GMAAVPVRKPNQPRQFSPDGVPLCAAGLAMPQQFTYAMNTNGPPQERARHRCPLLYPTATGEPCPTNDKHFATGGCVTTI
GTQVGATLRWTIDRGSAAYKALYRERALVEQINSQAYALGIEWPKLRRQSAVTAWTSLIYVVINLRVVHRQQGTHDPIHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53237; Mature: 53237

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRIIPNILRRFKRPVATVPVSDGALLPTHPRRPCPLSMPDLPPIIAADPTAAAAHQWL
CHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHC
APIPWHALPPLSDRPRPGPRPAPRAPFLAAFLLKLDLQLPSMGHLRRYLLRHPALVWTLG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEC
FPLRPDPAAPLGFDVAASVPSRRQFARVLRTLPTPMLDFLRMALVRRIRDALPPDHHATF
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
ADTIAGDTKHILAWVKENNPNRFAPDRAKKQVQPPGDPDCRLGVKRRSNQQPTPTTDGQS
HHHHCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEECCHHCCCCCCCCCCCCCC
PTQSKAEAYWGYASGIVVTRTPFGSIVLAEHTQPINAGDMTYFDPLMAQVEQTLGRRPRN
CCHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
GVWDAAFDSQRVYTYFHTAGGMAAVPVRKPNQPRQFSPDGVPLCAAGLAMPQQFTYAMNT
CCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC
NGPPQERARHRCPLLYPTATGEPCPTNDKHFATGGCVTTIGTQVGATLRWTIDRGSAAYK
CCCHHHHHHCCCCEEEECCCCCCCCCCCCCEECCCHHHHHHHHHCCEEEEEECCCHHHHH
ALYRERALVEQINSQAYALGIEWPKLRRQSAVTAWTSLIYVVINLRVVHRQQGTHDPIHD
HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
>Mature Secondary Structure
MLDRIIPNILRRFKRPVATVPVSDGALLPTHPRRPCPLSMPDLPPIIAADPTAAAAHQWL
CHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHC
APIPWHALPPLSDRPRPGPRPAPRAPFLAAFLLKLDLQLPSMGHLRRYLLRHPALVWTLG
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEC
FPLRPDPAAPLGFDVAASVPSRRQFARVLRTLPTPMLDFLRMALVRRIRDALPPDHHATF
CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
ADTIAGDTKHILAWVKENNPNRFAPDRAKKQVQPPGDPDCRLGVKRRSNQQPTPTTDGQS
HHHHCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEECCHHCCCCCCCCCCCCCC
PTQSKAEAYWGYASGIVVTRTPFGSIVLAEHTQPINAGDMTYFDPLMAQVEQTLGRRPRN
CCHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
GVWDAAFDSQRVYTYFHTAGGMAAVPVRKPNQPRQFSPDGVPLCAAGLAMPQQFTYAMNT
CCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC
NGPPQERARHRCPLLYPTATGEPCPTNDKHFATGGCVTTIGTQVGATLRWTIDRGSAAYK
CCCHHHHHHCCCCEEEECCCCCCCCCCCCCEECCCHHHHHHHHHCCEEEEEECCCHHHHH
ALYRERALVEQINSQAYALGIEWPKLRRQSAVTAWTSLIYVVINLRVVHRQQGTHDPIHD
HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA