| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897917
Identifier: 159897917
GI number: 159897917
Start: 1605741
End: 1607183
Strand: Direct
Name: 159897917
Synonym: Haur_1391
Alternate gene names: NA
Gene position: 1605741-1607183 (Clockwise)
Preceding gene: 159897891
Following gene: 159897920
Centisome position: 25.3
GC content: 63.48
Gene sequence:
>1443_bases ATGCTGGATCGCATCATACCAAACATCCTTCGTCGCTTCAAGCGCCCTGTGGCCACCGTGCCCGTGTCCGATGGTGCCCT GCTGCCTACCCATCCCCGTCGTCCCTGCCCGCTCTCCATGCCGGATCTCCCCCCGATCATTGCCGCTGATCCCACCGCTG CTGCGGCGCATCAGTGGCTCGCCCCCATTCCGTGGCATGCTTTGCCGCCGCTCAGTGACCGCCCTCGGCCTGGGCCACGC CCCGCGCCGCGTGCCCCCTTTCTCGCCGCGTTCCTCCTCAAACTCGATCTCCAATTGCCCTCCATGGGGCATTTGCGCCG CTATCTCCTGCGCCATCCCGCCCTCGTCTGGACGCTCGGCTTTCCCCTTCGGCCTGACCCTGCCGCCCCGCTCGGCTTCG ATGTCGCCGCCAGTGTCCCGTCGCGTCGTCAGTTTGCCCGTGTCCTGCGAACCTTACCCACGCCCATGCTCGACTTCCTC CGCATGGCGCTCGTGCGGCGCATTCGTGATGCCCTCCCCCCCGATCACCACGCCACCTTCGCCGACACCATTGCGGGCGA TACCAAGCACATTTTGGCGTGGGTCAAAGAGAACAATCCCAACCGCTTTGCCCCGGATCGCGCGAAGAAGCAGGTGCAAC CCCCCGGTGATCCGGACTGTCGGCTCGGAGTCAAGCGCCGGAGTAACCAGCAGCCGACCCCCACCACCGATGGTCAATCG CCAACCCAGAGTAAGGCCGAAGCCTACTGGGGCTACGCCAGTGGCATTGTCGTCACGCGCACCCCCTTTGGCTCAATCGT GCTTGCCGAACATACCCAACCGATCAATGCGGGCGATATGACCTATTTTGACCCGCTCATGGCGCAGGTGGAGCAGACGC TCGGTCGCCGACCGCGTAATGGCGTGTGGGATGCCGCCTTCGACAGCCAACGGGTCTACACCTACTTCCACACGGCTGGC GGGATGGCGGCGGTTCCGGTGCGGAAGCCCAACCAGCCACGGCAGTTTTCGCCCGACGGCGTGCCGCTGTGTGCCGCTGG TTTGGCCATGCCGCAACAGTTTACGTATGCCATGAACACCAATGGCCCGCCACAAGAGCGGGCACGCCATCGCTGTCCGT TGCTGTACCCGACTGCCACCGGCGAGCCATGCCCAACCAATGACAAACACTTTGCGACGGGCGGGTGTGTCACGACGATC GGGACGCAAGTTGGGGCAACGCTGCGCTGGACGATCGATCGTGGGTCAGCGGCCTATAAAGCCTTGTATCGCGAACGCGC GTTGGTCGAACAGATCAACAGCCAAGCGTATGCCTTGGGGATCGAATGGCCAAAACTGCGTCGTCAAAGCGCGGTCACAG CGTGGACATCCTTAATCTATGTGGTGATTAACCTGCGCGTCGTGCATCGCCAGCAGGGAACACACGACCCGATCCACGAC TAA
Upstream 100 bases:
>100_bases ACACCCATGCCCCAATCGGGGTCGTTTTCGACACCAGGCGACTCTCTATCGGGTACGATACGGGTATCAGATCCAACCAT CCCCAGAATAGGAGTCGCTG
Downstream 100 bases:
>100_bases CGTGGCATGCGTCTCGTCCGTGAATCGCCAGGGGGATGGCTTGGATGGATGGACGGACGCAGCCACAGCGATCAGGGAAC AGCCACAGCGGCGGATCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MLDRIIPNILRRFKRPVATVPVSDGALLPTHPRRPCPLSMPDLPPIIAADPTAAAAHQWLAPIPWHALPPLSDRPRPGPR PAPRAPFLAAFLLKLDLQLPSMGHLRRYLLRHPALVWTLGFPLRPDPAAPLGFDVAASVPSRRQFARVLRTLPTPMLDFL RMALVRRIRDALPPDHHATFADTIAGDTKHILAWVKENNPNRFAPDRAKKQVQPPGDPDCRLGVKRRSNQQPTPTTDGQS PTQSKAEAYWGYASGIVVTRTPFGSIVLAEHTQPINAGDMTYFDPLMAQVEQTLGRRPRNGVWDAAFDSQRVYTYFHTAG GMAAVPVRKPNQPRQFSPDGVPLCAAGLAMPQQFTYAMNTNGPPQERARHRCPLLYPTATGEPCPTNDKHFATGGCVTTI GTQVGATLRWTIDRGSAAYKALYRERALVEQINSQAYALGIEWPKLRRQSAVTAWTSLIYVVINLRVVHRQQGTHDPIHD
Sequences:
>Translated_480_residues MLDRIIPNILRRFKRPVATVPVSDGALLPTHPRRPCPLSMPDLPPIIAADPTAAAAHQWLAPIPWHALPPLSDRPRPGPR PAPRAPFLAAFLLKLDLQLPSMGHLRRYLLRHPALVWTLGFPLRPDPAAPLGFDVAASVPSRRQFARVLRTLPTPMLDFL RMALVRRIRDALPPDHHATFADTIAGDTKHILAWVKENNPNRFAPDRAKKQVQPPGDPDCRLGVKRRSNQQPTPTTDGQS PTQSKAEAYWGYASGIVVTRTPFGSIVLAEHTQPINAGDMTYFDPLMAQVEQTLGRRPRNGVWDAAFDSQRVYTYFHTAG GMAAVPVRKPNQPRQFSPDGVPLCAAGLAMPQQFTYAMNTNGPPQERARHRCPLLYPTATGEPCPTNDKHFATGGCVTTI GTQVGATLRWTIDRGSAAYKALYRERALVEQINSQAYALGIEWPKLRRQSAVTAWTSLIYVVINLRVVHRQQGTHDPIHD >Mature_480_residues MLDRIIPNILRRFKRPVATVPVSDGALLPTHPRRPCPLSMPDLPPIIAADPTAAAAHQWLAPIPWHALPPLSDRPRPGPR PAPRAPFLAAFLLKLDLQLPSMGHLRRYLLRHPALVWTLGFPLRPDPAAPLGFDVAASVPSRRQFARVLRTLPTPMLDFL RMALVRRIRDALPPDHHATFADTIAGDTKHILAWVKENNPNRFAPDRAKKQVQPPGDPDCRLGVKRRSNQQPTPTTDGQS PTQSKAEAYWGYASGIVVTRTPFGSIVLAEHTQPINAGDMTYFDPLMAQVEQTLGRRPRNGVWDAAFDSQRVYTYFHTAG GMAAVPVRKPNQPRQFSPDGVPLCAAGLAMPQQFTYAMNTNGPPQERARHRCPLLYPTATGEPCPTNDKHFATGGCVTTI GTQVGATLRWTIDRGSAAYKALYRERALVEQINSQAYALGIEWPKLRRQSAVTAWTSLIYVVINLRVVHRQQGTHDPIHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53237; Mature: 53237
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRIIPNILRRFKRPVATVPVSDGALLPTHPRRPCPLSMPDLPPIIAADPTAAAAHQWL CHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHC APIPWHALPPLSDRPRPGPRPAPRAPFLAAFLLKLDLQLPSMGHLRRYLLRHPALVWTLG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEC FPLRPDPAAPLGFDVAASVPSRRQFARVLRTLPTPMLDFLRMALVRRIRDALPPDHHATF CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHH ADTIAGDTKHILAWVKENNPNRFAPDRAKKQVQPPGDPDCRLGVKRRSNQQPTPTTDGQS HHHHCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEECCHHCCCCCCCCCCCCCC PTQSKAEAYWGYASGIVVTRTPFGSIVLAEHTQPINAGDMTYFDPLMAQVEQTLGRRPRN CCHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC GVWDAAFDSQRVYTYFHTAGGMAAVPVRKPNQPRQFSPDGVPLCAAGLAMPQQFTYAMNT CCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC NGPPQERARHRCPLLYPTATGEPCPTNDKHFATGGCVTTIGTQVGATLRWTIDRGSAAYK CCCHHHHHHCCCCEEEECCCCCCCCCCCCCEECCCHHHHHHHHHCCEEEEEECCCHHHHH ALYRERALVEQINSQAYALGIEWPKLRRQSAVTAWTSLIYVVINLRVVHRQQGTHDPIHD HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC >Mature Secondary Structure MLDRIIPNILRRFKRPVATVPVSDGALLPTHPRRPCPLSMPDLPPIIAADPTAAAAHQWL CHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHC APIPWHALPPLSDRPRPGPRPAPRAPFLAAFLLKLDLQLPSMGHLRRYLLRHPALVWTLG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEC FPLRPDPAAPLGFDVAASVPSRRQFARVLRTLPTPMLDFLRMALVRRIRDALPPDHHATF CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHH ADTIAGDTKHILAWVKENNPNRFAPDRAKKQVQPPGDPDCRLGVKRRSNQQPTPTTDGQS HHHHCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEECCHHCCCCCCCCCCCCCC PTQSKAEAYWGYASGIVVTRTPFGSIVLAEHTQPINAGDMTYFDPLMAQVEQTLGRRPRN CCHHHHHHHHHHHCCEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC GVWDAAFDSQRVYTYFHTAGGMAAVPVRKPNQPRQFSPDGVPLCAAGLAMPQQFTYAMNT CCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC NGPPQERARHRCPLLYPTATGEPCPTNDKHFATGGCVTTIGTQVGATLRWTIDRGSAAYK CCCHHHHHHCCCCEEEECCCCCCCCCCCCCEECCCHHHHHHHHHCCEEEEEECCCHHHHH ALYRERALVEQINSQAYALGIEWPKLRRQSAVTAWTSLIYVVINLRVVHRQQGTHDPIHD HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA