| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897911
Identifier: 159897911
GI number: 159897911
Start: 1600133
End: 1600852
Strand: Reverse
Name: 159897911
Synonym: Haur_1385
Alternate gene names: NA
Gene position: 1600852-1600133 (Counterclockwise)
Preceding gene: 159897912
Following gene: 159897910
Centisome position: 25.22
GC content: 52.64
Gene sequence:
>720_bases ATGACCACGCACGAACCACTACAACTTATCACAGGTCAACGTCACGCCACCGAATCGGATAAGGCGGTAGTCGCCTGCAA CGATTATCTGCGCCTTGGGAGTGGGCGTTCGTTACGCATCTTGCTTGAGCGCTACCGCCAACAAACCGCCAACAAACCGC CAACAGTTCGCTTCAAAACACTGGCTCACTGGTCAACCGAATTCCATTGGACCGATCGTGCGAAAGCCTATGATGCGCAG CTGGAGCAAGCAAAAAATGATGCGCTGGCCGCTCGACGACGTGAGGTGTTTGAAGACGGCTTAGGCCTTGACTTCGAGCG GGTGATCAAGCTCAAGGAGTTGGCTAAGGATTTAGAAGAACAAATTAAAGAGGTTGACGAACATCACCCACACAAGCGAC CGAATGTATGGATACGCGATGTCAAACAAATCGGGGCAGGCGAGTATGCCGAGCAGGTTGAAATCTACCGCTACAACTCG GCCCTCATTAGTGATTATCGCGGGGTGCTCGATGACTTGGCCAAGGAAACGGGAGGTCGCAAGCAGAAACAAGAACATGT GCATAAAGGGGATCGCAGTGCGCCGATTGTGATTGATAGTCCAGCGTTGGAACAGGCTGCCAAGGAATTGCAGCAGTGGC GTGAGGAACAATGTCGAATGCTGTCGAACTGGCAAAGTGCCATGCCGACCCTGCCTACTTCACCCACCACTTCGGATTAA
Upstream 100 bases:
>100_bases GCTTTGTTCTGTGTTTCTTCATCGTCATCAGCGATGACCTATCGCAAGACGCTTAATATTATCCGCCGCGCCAGCGGCGA AACGACCGAGGCGGCGAGCA
Downstream 100 bases:
>100_bases TCGACGATGCCCAAGGGTTGGGGGATGGCAGCGGCGCGATGCCCTTTACGCTCTGGCCTGCCCAAGTACAGGTGCTCTGG ACACTCTTAATCCAGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTTHEPLQLITGQRHATESDKAVVACNDYLRLGSGRSLRILLERYRQQTANKPPTVRFKTLAHWSTEFHWTDRAKAYDAQ LEQAKNDALAARRREVFEDGLGLDFERVIKLKELAKDLEEQIKEVDEHHPHKRPNVWIRDVKQIGAGEYAEQVEIYRYNS ALISDYRGVLDDLAKETGGRKQKQEHVHKGDRSAPIVIDSPALEQAAKELQQWREEQCRMLSNWQSAMPTLPTSPTTSD
Sequences:
>Translated_239_residues MTTHEPLQLITGQRHATESDKAVVACNDYLRLGSGRSLRILLERYRQQTANKPPTVRFKTLAHWSTEFHWTDRAKAYDAQ LEQAKNDALAARRREVFEDGLGLDFERVIKLKELAKDLEEQIKEVDEHHPHKRPNVWIRDVKQIGAGEYAEQVEIYRYNS ALISDYRGVLDDLAKETGGRKQKQEHVHKGDRSAPIVIDSPALEQAAKELQQWREEQCRMLSNWQSAMPTLPTSPTTSD >Mature_238_residues TTHEPLQLITGQRHATESDKAVVACNDYLRLGSGRSLRILLERYRQQTANKPPTVRFKTLAHWSTEFHWTDRAKAYDAQL EQAKNDALAARRREVFEDGLGLDFERVIKLKELAKDLEEQIKEVDEHHPHKRPNVWIRDVKQIGAGEYAEQVEIYRYNSA LISDYRGVLDDLAKETGGRKQKQEHVHKGDRSAPIVIDSPALEQAAKELQQWREEQCRMLSNWQSAMPTLPTSPTTSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27539; Mature: 27408
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHEPLQLITGQRHATESDKAVVACNDYLRLGSGRSLRILLERYRQQTANKPPTVRFKT CCCCCHHHHHCCCCCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEHH LAHWSTEFHWTDRAKAYDAQLEQAKNDALAARRREVFEDGLGLDFERVIKLKELAKDLEE HHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH QIKEVDEHHPHKRPNVWIRDVKQIGAGEYAEQVEIYRYNSALISDYRGVLDDLAKETGGR HHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KQKQEHVHKGDRSAPIVIDSPALEQAAKELQQWREEQCRMLSNWQSAMPTLPTSPTTSD HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TTHEPLQLITGQRHATESDKAVVACNDYLRLGSGRSLRILLERYRQQTANKPPTVRFKT CCCCHHHHHCCCCCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEHH LAHWSTEFHWTDRAKAYDAQLEQAKNDALAARRREVFEDGLGLDFERVIKLKELAKDLEE HHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH QIKEVDEHHPHKRPNVWIRDVKQIGAGEYAEQVEIYRYNSALISDYRGVLDDLAKETGGR HHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KQKQEHVHKGDRSAPIVIDSPALEQAAKELQQWREEQCRMLSNWQSAMPTLPTSPTTSD HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA