| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897803
Identifier: 159897803
GI number: 159897803
Start: 1484120
End: 1484605
Strand: Direct
Name: 159897803
Synonym: Haur_1274
Alternate gene names: NA
Gene position: 1484120-1484605 (Clockwise)
Preceding gene: 159897802
Following gene: 159897808
Centisome position: 23.38
GC content: 45.88
Gene sequence:
>486_bases ATGAAACTGGTTCGTCGTTTGGCATCAGGCTTGATGTTGTTGATGGTGATGGGTGTTTTGGCTGCTTGTGGTGGTTCAGC CGCCGAAGCCCCCGAAGTTCGGGCCGAAAAATTCTTCAGCGATTTTGCGGCTGCCTTCAATGATCCCAAGCTAAGCGAAG CTGCAACCCAAGAAAAATGGGCCGATACCCTTTCAAAATATTTCGTGCCTGAGCAACAAGCTGCCCAAAAAACCGAAATC TTAACTTCATTGCAACAATTGGGTTCGCTTGGCGCTGAATTAAACGTCAAGGTCGAAAACCTCAAAGTTGAAAAAGTTTC AGAAAGCGGCGATGATGCTGAAATCAAAATCGCCAGTGGTACGATGAGCATGTCGGTGCTGGGTCAAGAACAAAAAACCG ATATGGCGACCGAAGGCTTTGGCTCATCGGGTAGCAGCACCTCAAAAATGAAAAAAGTTGATAATGTTTGGTATATCATT CCATAA
Upstream 100 bases:
>100_bases ACCAGCCAATCCAATCAGCTTACTAACCCCTTGACAGTACTGCTATGCTTGCGACTGTGGAAATTTTACCCTATCAATAG GGTCTGTGAGGAAACGCATT
Downstream 100 bases:
>100_bases GCAACCAGCTTAACCAAGCAAACGCCCCGCCGATCGTTTGATCGTGCGGGGCGTTTGTAAAAAAAGACCGGGATCTAGTG ATTTGCCGACATGTTCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKLVRRLASGLMLLMVMGVLAACGGSAAEAPEVRAEKFFSDFAAAFNDPKLSEAATQEKWADTLSKYFVPEQQAAQKTEI LTSLQQLGSLGAELNVKVENLKVEKVSESGDDAEIKIASGTMSMSVLGQEQKTDMATEGFGSSGSSTSKMKKVDNVWYII P
Sequences:
>Translated_161_residues MKLVRRLASGLMLLMVMGVLAACGGSAAEAPEVRAEKFFSDFAAAFNDPKLSEAATQEKWADTLSKYFVPEQQAAQKTEI LTSLQQLGSLGAELNVKVENLKVEKVSESGDDAEIKIASGTMSMSVLGQEQKTDMATEGFGSSGSSTSKMKKVDNVWYII P >Mature_161_residues MKLVRRLASGLMLLMVMGVLAACGGSAAEAPEVRAEKFFSDFAAAFNDPKLSEAATQEKWADTLSKYFVPEQQAAQKTEI LTSLQQLGSLGAELNVKVENLKVEKVSESGDDAEIKIASGTMSMSVLGQEQKTDMATEGFGSSGSSTSKMKKVDNVWYII P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17276; Mature: 17276
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVRRLASGLMLLMVMGVLAACGGSAAEAPEVRAEKFFSDFAAAFNDPKLSEAATQEKW CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ADTLSKYFVPEQQAAQKTEILTSLQQLGSLGAELNVKVENLKVEKVSESGDDAEIKIASG HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEEEECCCCCCCCEEEEECC TMSMSVLGQEQKTDMATEGFGSSGSSTSKMKKVDNVWYIIP CCHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHCCEEEEEC >Mature Secondary Structure MKLVRRLASGLMLLMVMGVLAACGGSAAEAPEVRAEKFFSDFAAAFNDPKLSEAATQEKW CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ADTLSKYFVPEQQAAQKTEILTSLQQLGSLGAELNVKVENLKVEKVSESGDDAEIKIASG HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECEEEEECCCCCCCCEEEEECC TMSMSVLGQEQKTDMATEGFGSSGSSTSKMKKVDNVWYIIP CCHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA