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The map label for this gene is yurM [H]

Identifier: 159897774

GI number: 159897774

Start: 1451463

End: 1452326

Strand: Direct

Name: yurM [H]

Synonym: Haur_1245

Alternate gene names: 159897774

Gene position: 1451463-1452326 (Clockwise)

Preceding gene: 159897773

Following gene: 159897775

Centisome position: 22.87

GC content: 49.88

Gene sequence:

>864_bases
ATGACCAGCCTACCAATTAAATCTACCCTCAAAAAACCACATCAGGCTGGTTTTGGCCGCTACTTGGTCTTGGCTGCACT
GATTATTGCAGTGCTGGTGGTGCTGCTGCCCTTTGCAATTGTGGTGATCAATGCCTTCAAAACCCCGACTGATTATGCCA
GCAACGGCCCGCTCAGTTGGCCAAGCGCATGGTCGATCGATGGGATCGTTGAGTTTTGGCAGCGGGTCGATTATAGCCAG
AAGTTGCTCAATAGCTTGCTGATTAGCGCGAGCGTGGCGGTGATCGGCGTGCTGTTGTCGTTGCTGAATGCCTTTGCGCT
TGGGATTGGCCGCATCAAAGGCCGCGTTTGGCTGTTGATTCTATTTATGGTTGCCAACACCCTGCCCCAAGAATCACTGG
TTTATCCGTTGTACTACCTCTCCAAAGAATTCGATCTCTACAACACACGCTTTGTCGTGATTTTGATTTTCTCAGTGATT
CAGAGCGCCTTTGGCACCTATTTGCTCTCATCGGTGTTCAGTACGTTTCCCAAAGAGATGCTCGAAGCGGCAATGTTGGA
TGGCTGCAACAAACTGCAACTCTTGTTTAAGATTATTGTTCCGGTCAGCCGTCCAACCCTCTCGGTGCTCTTTACCTTCT
TTTTCATCTGGACATGGAACGAATTTTTCTTGCCCTTGATTTTGTTGATTAGCAACGATCGCCAAACGGTGCCGATTGCG
GTGGGCGTGCTGCAAGGCCAACGCAACATGGAAGCCACCCTATCCAGTGCTTCAGCTTTGTTGGGGATTCTGCCCTGCTT
TATCTTCTTCCTAATCTTCCAACGCACCCTAACCAAAGGCATCGCCGCAGGTAGTGTGAAGTGA

Upstream 100 bases:

>100_bases
AATGTTGGCTATGGCGCAGCGATTGCCACCGTCATGACTTTGATCATCATTGTGCTGACGATCATTTTTATTCGTCGCCA
ATCTGCCGAGGAGCTTTAAG

Downstream 100 bases:

>100_bases
TCAGAGCATAGGAGTTGGGAATCGGTTGGCGGGGGTTGGGGATCAGGCTGTGAGCCATTGATCACAGGAATATAATCCTC
CAAATCTGTGCCAATCTGTG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTSLPIKSTLKKPHQAGFGRYLVLAALIIAVLVVLLPFAIVVINAFKTPTDYASNGPLSWPSAWSIDGIVEFWQRVDYSQ
KLLNSLLISASVAVIGVLLSLLNAFALGIGRIKGRVWLLILFMVANTLPQESLVYPLYYLSKEFDLYNTRFVVILIFSVI
QSAFGTYLLSSVFSTFPKEMLEAAMLDGCNKLQLLFKIIVPVSRPTLSVLFTFFFIWTWNEFFLPLILLISNDRQTVPIA
VGVLQGQRNMEATLSSASALLGILPCFIFFLIFQRTLTKGIAAGSVK

Sequences:

>Translated_287_residues
MTSLPIKSTLKKPHQAGFGRYLVLAALIIAVLVVLLPFAIVVINAFKTPTDYASNGPLSWPSAWSIDGIVEFWQRVDYSQ
KLLNSLLISASVAVIGVLLSLLNAFALGIGRIKGRVWLLILFMVANTLPQESLVYPLYYLSKEFDLYNTRFVVILIFSVI
QSAFGTYLLSSVFSTFPKEMLEAAMLDGCNKLQLLFKIIVPVSRPTLSVLFTFFFIWTWNEFFLPLILLISNDRQTVPIA
VGVLQGQRNMEATLSSASALLGILPCFIFFLIFQRTLTKGIAAGSVK
>Mature_286_residues
TSLPIKSTLKKPHQAGFGRYLVLAALIIAVLVVLLPFAIVVINAFKTPTDYASNGPLSWPSAWSIDGIVEFWQRVDYSQK
LLNSLLISASVAVIGVLLSLLNAFALGIGRIKGRVWLLILFMVANTLPQESLVYPLYYLSKEFDLYNTRFVVILIFSVIQ
SAFGTYLLSSVFSTFPKEMLEAAMLDGCNKLQLLFKIIVPVSRPTLSVLFTFFFIWTWNEFFLPLILLISNDRQTVPIAV
GVLQGQRNMEATLSSASALLGILPCFIFFLIFQRTLTKGIAAGSVK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=274, Percent_Identity=29.9270072992701, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1789860, Length=264, Percent_Identity=24.6212121212121, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790464, Length=214, Percent_Identity=29.9065420560748, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31884; Mature: 31753

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00599 AA_TRANSFER_CLASS_2 ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSLPIKSTLKKPHQAGFGRYLVLAALIIAVLVVLLPFAIVVINAFKTPTDYASNGPLSW
CCCCCHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PSAWSIDGIVEFWQRVDYSQKLLNSLLISASVAVIGVLLSLLNAFALGIGRIKGRVWLLI
CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFMVANTLPQESLVYPLYYLSKEFDLYNTRFVVILIFSVIQSAFGTYLLSSVFSTFPKEM
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEAAMLDGCNKLQLLFKIIVPVSRPTLSVLFTFFFIWTWNEFFLPLILLISNDRQTVPIA
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHH
VGVLQGQRNMEATLSSASALLGILPCFIFFLIFQRTLTKGIAAGSVK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]