| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897406
Identifier: 159897406
GI number: 159897406
Start: 997928
End: 999154
Strand: Direct
Name: 159897406
Synonym: Haur_0877
Alternate gene names: NA
Gene position: 997928-999154 (Clockwise)
Preceding gene: 159897405
Following gene: 159897407
Centisome position: 15.72
GC content: 50.04
Gene sequence:
>1227_bases ATGTTGAAACAACAAATGGCAACCGGATCAAACACGTCGGATTTGAACAACCTGATCGTTAATCAATCCTTCCAAGATAT TGCGGAACGCTTCCGCTTTGGTGCACCTCCGGTCTCCCACCTGGCCAATTTTGATGCCCGTAGTGATGCTGAATTGCTGA AGGCTGCTGCTGATCATCCTAGTGCCTTGGAGCGCGAACGCGCACTCTGGGAATATGCTCATCGTAATCAAAAGGCTGCT TTAGCTGTTTTGAGCAATCACCTTAACATTGAAAGTGACCCATCAGTCCGCTGGAATTTGCTCTGGTTGATGGTTAAGGT CGGCGAAGATGCAGCCGTACCAGCGTTAACTGCTGCCTTGAGTGATCCCCATAGCGAAGTCCGTGACTGGGCGACCTTGT TTCTCGAAGAATTAACAGGTCAAGAATATCCGATGGTCTACAACGAAGTTCAATATGAAAATGATCGCACCTTCGACCAA ACCTTGCCATTGCAAATTGCAGGCTTTGCCGATGTGAATGTTCCTGGCATGGGTTGGGTACAGGCCCGGCTCTCACCTCA ATGGTTTTCATCAATCCTTGGTCGGGTATTAGCTTGTACCAATAGCTCAAGCTTTATGAGCGATCTAGTGATTGAGAAAG AACTGTTGAACTACCATGAAGATGGCAGCAACCACTACGAAACCTTTATGTTCCGTGGCGCTTCCTACCCTATCACCGAT ACCGTAACCCAGCACATCTATGAATCGAACACGATGCGCCCATTCTATCAATCGGGCAAAGTTAAAGTTGGGGCACCGAT TGTTACTCCTGTATCGTTGGCTCGTGCTGCTGGTACCGAGCGCCTACGCCCTGGCAAACTCAAAGAAATGAACATGCATG CCTCAGATGGAGTCGAGGGCGCACGTGGCGAACGCTTGCGCGAAGTTGGGATTGTGCGCAGTGTGCGTGGTCGTTTCTGG GGCTGGGCCCACACTGATCTTAATCGCTACCTTGAAACGGGGATTATTGCCCCTGGTAGCGTGCAGTTGGTAAGCACCGC TGATCCCGTCGTTGGCAAGATGGCTAACACCGTGATCTACGGAACTTTCCGTGGTAAGCTCGGCGATCTAACTGGCGATG GCAAACTCAATGTGAATTTGATTCCTTGTCATGGCACCATCAATGGCGAACTTGACCTGAACTGTGATGGCATTGCTGAC GAAGATCCTCGGATTCCTCGCGCATAA
Upstream 100 bases:
>100_bases GCAGATACCGATAGCGCATACTAAGGGTAGGCGCAAGCAGCAATACGGGAATTCTCCAACCGCCTATAGGTTCTCAATGG CTAACTTAAGGAGTTCTCAG
Downstream 100 bases:
>100_bases GGCAGTCACACAGTTTCTGCCGAAATGTGGTTGGGGGCTGTAATATGCCTCCAACCACATCTGCTTGTTGATGGTATGTG TACAAGTGAGGAGCATATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MLKQQMATGSNTSDLNNLIVNQSFQDIAERFRFGAPPVSHLANFDARSDAELLKAAADHPSALERERALWEYAHRNQKAA LAVLSNHLNIESDPSVRWNLLWLMVKVGEDAAVPALTAALSDPHSEVRDWATLFLEELTGQEYPMVYNEVQYENDRTFDQ TLPLQIAGFADVNVPGMGWVQARLSPQWFSSILGRVLACTNSSSFMSDLVIEKELLNYHEDGSNHYETFMFRGASYPITD TVTQHIYESNTMRPFYQSGKVKVGAPIVTPVSLARAAGTERLRPGKLKEMNMHASDGVEGARGERLREVGIVRSVRGRFW GWAHTDLNRYLETGIIAPGSVQLVSTADPVVGKMANTVIYGTFRGKLGDLTGDGKLNVNLIPCHGTINGELDLNCDGIAD EDPRIPRA
Sequences:
>Translated_408_residues MLKQQMATGSNTSDLNNLIVNQSFQDIAERFRFGAPPVSHLANFDARSDAELLKAAADHPSALERERALWEYAHRNQKAA LAVLSNHLNIESDPSVRWNLLWLMVKVGEDAAVPALTAALSDPHSEVRDWATLFLEELTGQEYPMVYNEVQYENDRTFDQ TLPLQIAGFADVNVPGMGWVQARLSPQWFSSILGRVLACTNSSSFMSDLVIEKELLNYHEDGSNHYETFMFRGASYPITD TVTQHIYESNTMRPFYQSGKVKVGAPIVTPVSLARAAGTERLRPGKLKEMNMHASDGVEGARGERLREVGIVRSVRGRFW GWAHTDLNRYLETGIIAPGSVQLVSTADPVVGKMANTVIYGTFRGKLGDLTGDGKLNVNLIPCHGTINGELDLNCDGIAD EDPRIPRA >Mature_408_residues MLKQQMATGSNTSDLNNLIVNQSFQDIAERFRFGAPPVSHLANFDARSDAELLKAAADHPSALERERALWEYAHRNQKAA LAVLSNHLNIESDPSVRWNLLWLMVKVGEDAAVPALTAALSDPHSEVRDWATLFLEELTGQEYPMVYNEVQYENDRTFDQ TLPLQIAGFADVNVPGMGWVQARLSPQWFSSILGRVLACTNSSSFMSDLVIEKELLNYHEDGSNHYETFMFRGASYPITD TVTQHIYESNTMRPFYQSGKVKVGAPIVTPVSLARAAGTERLRPGKLKEMNMHASDGVEGARGERLREVGIVRSVRGRFW GWAHTDLNRYLETGIIAPGSVQLVSTADPVVGKMANTVIYGTFRGKLGDLTGDGKLNVNLIPCHGTINGELDLNCDGIAD EDPRIPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45172; Mature: 45172
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00923 ASP_GLU_RACEMASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQQMATGSNTSDLNNLIVNQSFQDIAERFRFGAPPVSHLANFDARSDAELLKAAADHP CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHCCCH SALERERALWEYAHRNQKAALAVLSNHLNIESDPSVRWNLLWLMVKVGEDAAVPALTAAL HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHH SDPHSEVRDWATLFLEELTGQEYPMVYNEVQYENDRTFDQTLPLQIAGFADVNVPGMGWV CCCHHHHHHHHHHHHHHHCCCCCCCEEHEEECCCCCCCCCCCCEEEECEECCCCCCCCEE QARLSPQWFSSILGRVLACTNSSSFMSDLVIEKELLNYHEDGSNHYETFMFRGASYPITD EECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHH TVTQHIYESNTMRPFYQSGKVKVGAPIVTPVSLARAAGTERLRPGKLKEMNMHASDGVEG HHHHHHHHCCCCCHHHHCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC ARGERLREVGIVRSVRGRFWGWAHTDLNRYLETGIIAPGSVQLVSTADPVVGKMANTVIY CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCEEEE GTFRGKLGDLTGDGKLNVNLIPCHGTINGELDLNCDGIADEDPRIPRA EEECCCCCCCCCCCEEEEEEEEECCEECCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MLKQQMATGSNTSDLNNLIVNQSFQDIAERFRFGAPPVSHLANFDARSDAELLKAAADHP CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHCCCH SALERERALWEYAHRNQKAALAVLSNHLNIESDPSVRWNLLWLMVKVGEDAAVPALTAAL HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHH SDPHSEVRDWATLFLEELTGQEYPMVYNEVQYENDRTFDQTLPLQIAGFADVNVPGMGWV CCCHHHHHHHHHHHHHHHCCCCCCCEEHEEECCCCCCCCCCCCEEEECEECCCCCCCCEE QARLSPQWFSSILGRVLACTNSSSFMSDLVIEKELLNYHEDGSNHYETFMFRGASYPITD EECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHH TVTQHIYESNTMRPFYQSGKVKVGAPIVTPVSLARAAGTERLRPGKLKEMNMHASDGVEG HHHHHHHHCCCCCHHHHCCCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC ARGERLREVGIVRSVRGRFWGWAHTDLNRYLETGIIAPGSVQLVSTADPVVGKMANTVIY CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCEEEE GTFRGKLGDLTGDGKLNVNLIPCHGTINGELDLNCDGIADEDPRIPRA EEECCCCCCCCCCCEEEEEEEEECCEECCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA