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The map label for this gene is yqhC [C]

Identifier: 159897401

GI number: 159897401

Start: 993339

End: 994217

Strand: Direct

Name: yqhC [C]

Synonym: Haur_0872

Alternate gene names: 159897401

Gene position: 993339-994217 (Clockwise)

Preceding gene: 159897400

Following gene: 159897402

Centisome position: 15.65

GC content: 48.81

Gene sequence:

>879_bases
ATGTCCTTGGAATCGGGATTAATCAACGAGGTAAAGGGGAAGCTTGCTGATCAACGAGGAACGCTATCGAGTATTCGCCA
GCCATCAAGACCAGACCAGTGGCATGATCACGATCAAACAACCCATTATAGCGCGGCGGTTGAGCGGGTTATTGGCGTAA
TGCGGGGCCAATCCCATGAATTATTACGGCTGGAACAATTAGCTGATATTGCAAACCTTAGCCCTTTCCATTTTAATCGT
ATCTTCCGCCAAACGGTTGGGCTGCCACCTGGTAAATTTTTATCAACCCTGCGGCTTGATCGGGCCAAGCGTTTATTGCT
TACCACCGATTTAAGTATTACTACAATTTGTTTCGAGGCAGGCTATAGTAGTTTAGGCACGTTTACGACCCAGTTCACCC
AGGTTGTTGGGGTTTCACCGCGACGCTTGCGCTTGCTCAGGGCCACATTTGAAACTCCGCGCTTGGATCGTTTACACCAC
CAATATGTTCATGAAACCAAACCTGATCAACAAGCATTGACGGTGCATGGGAGCATCATTGCCCCAGAAAGCTTTAGTGG
CTCGATTTTTATCGGTCTCTACCCAATTGCAGCGCCTTTAGGCCAGCCTGTTAGTTGTGTTTTTCTTAATGCACTTGGCG
ATTTTCAACTCAAGGCTGAAAAGCCAGGCCGATACCATCTATTTGCAGGAGCTATACCTTGGTCGAATGACCCCTTGGCC
TATCTCTTACCTTGTGAACAGACGGCTTGGTTTGCTAGAACCGCCAGTGTTATTATGCTCCGTTCAGATACGTTTACGAG
CTGTGGCGTAATGAGTCTACGCCGTCGCCGCCCAACTGATCCCCCACTGCTGACGATACCCTCAGCCCTGACAACCTAA

Upstream 100 bases:

>100_bases
AGGCTTGGGCTGCCAAACGCAGTTCTATCCAGATCGCAACGTCGAACCTAGCTCCTAGAGTAGAAGCCTAATCTGCTGCT
CGTCATTTGAGGAGGTCGCG

Downstream 100 bases:

>100_bases
AATCTGCATGCACTCTTCCATTTGAGGTCTCATGGAAGAGTGCCCCCCTTCTTTGACAAAAAATGCGCAATCTAGAAGAA
GTAATTAGCCCAAACGTTGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC/XylS Family Transcriptional Regulator; AraC-Family Transcriptional Regulator

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSLESGLINEVKGKLADQRGTLSSIRQPSRPDQWHDHDQTTHYSAAVERVIGVMRGQSHELLRLEQLADIANLSPFHFNR
IFRQTVGLPPGKFLSTLRLDRAKRLLLTTDLSITTICFEAGYSSLGTFTTQFTQVVGVSPRRLRLLRATFETPRLDRLHH
QYVHETKPDQQALTVHGSIIAPESFSGSIFIGLYPIAAPLGQPVSCVFLNALGDFQLKAEKPGRYHLFAGAIPWSNDPLA
YLLPCEQTAWFARTASVIMLRSDTFTSCGVMSLRRRRPTDPPLLTIPSALTT

Sequences:

>Translated_292_residues
MSLESGLINEVKGKLADQRGTLSSIRQPSRPDQWHDHDQTTHYSAAVERVIGVMRGQSHELLRLEQLADIANLSPFHFNR
IFRQTVGLPPGKFLSTLRLDRAKRLLLTTDLSITTICFEAGYSSLGTFTTQFTQVVGVSPRRLRLLRATFETPRLDRLHH
QYVHETKPDQQALTVHGSIIAPESFSGSIFIGLYPIAAPLGQPVSCVFLNALGDFQLKAEKPGRYHLFAGAIPWSNDPLA
YLLPCEQTAWFARTASVIMLRSDTFTSCGVMSLRRRRPTDPPLLTIPSALTT
>Mature_291_residues
SLESGLINEVKGKLADQRGTLSSIRQPSRPDQWHDHDQTTHYSAAVERVIGVMRGQSHELLRLEQLADIANLSPFHFNRI
FRQTVGLPPGKFLSTLRLDRAKRLLLTTDLSITTICFEAGYSSLGTFTTQFTQVVGVSPRRLRLLRATFETPRLDRLHHQ
YVHETKPDQQALTVHGSIIAPESFSGSIFIGLYPIAAPLGQPVSCVFLNALGDFQLKAEKPGRYHLFAGAIPWSNDPLAY
LLPCEQTAWFARTASVIMLRSDTFTSCGVMSLRRRRPTDPPLLTIPSALTT

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32592; Mature: 32461

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLESGLINEVKGKLADQRGTLSSIRQPSRPDQWHDHDQTTHYSAAVERVIGVMRGQSHE
CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH
LLRLEQLADIANLSPFHFNRIFRQTVGLPPGKFLSTLRLDRAKRLLLTTDLSITTICFEA
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEEECCHHEEHEEHH
GYSSLGTFTTQFTQVVGVSPRRLRLLRATFETPRLDRLHHQYVHETKPDQQALTVHGSII
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECEEE
APESFSGSIFIGLYPIAAPLGQPVSCVFLNALGDFQLKAEKPGRYHLFAGAIPWSNDPLA
CCCCCCCCEEEEEEEHHHCCCCCHHEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCEE
YLLPCEQTAWFARTASVIMLRSDTFTSCGVMSLRRRRPTDPPLLTIPSALTT
EEEECCCHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCHHHCC
>Mature Secondary Structure 
SLESGLINEVKGKLADQRGTLSSIRQPSRPDQWHDHDQTTHYSAAVERVIGVMRGQSHE
CCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH
LLRLEQLADIANLSPFHFNRIFRQTVGLPPGKFLSTLRLDRAKRLLLTTDLSITTICFEA
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCEEEEEECCHHEEHEEHH
GYSSLGTFTTQFTQVVGVSPRRLRLLRATFETPRLDRLHHQYVHETKPDQQALTVHGSII
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECEEE
APESFSGSIFIGLYPIAAPLGQPVSCVFLNALGDFQLKAEKPGRYHLFAGAIPWSNDPLA
CCCCCCCCEEEEEEEHHHCCCCCHHEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCEE
YLLPCEQTAWFARTASVIMLRSDTFTSCGVMSLRRRRPTDPPLLTIPSALTT
EEEECCCHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA