Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897319

Identifier: 159897319

GI number: 159897319

Start: 892730

End: 893761

Strand: Direct

Name: 159897319

Synonym: Haur_0790

Alternate gene names: NA

Gene position: 892730-893761 (Clockwise)

Preceding gene: 159897318

Following gene: 159897321

Centisome position: 14.07

GC content: 51.74

Gene sequence:

>1032_bases
ATGCGATTCGTGATTTGTGTTCTTGTTTGTATTCTCTTGTCAAGTTGTGGGGCGGCTAATTCGGCGACGGTAACCCCGCC
AGCTGCGGTTGCCCCCAAGCTTGGCGATATTTCGCTGATTATCTCGCGGGGTGGGGATTTGTGGCGTTTCGATTTGCCCG
CTAAACAGTGGACGCAATTAACCAACGAAGCGCCCAATGCCTACTCAACCTTCCCTAGTATTGCTCCCGATGGCAAAAGC
GTGGTCTATTCGTATCGGCCACCTGTGCCAACTCCTAGTGCCGAGCAACCCTTTGTTGTGCCCGTTAATCATGCCAACCA
AATTGCGGTTGATGGCGGAGCCAGTAAATCGTTGTTTGTGCCCGATGGCGGCAAGCGCGATGGTCTGCAAATTTACGATT
CACTCGATACGCCAGTTTGGTCGCCTGATGGCAAAACCTTGTATGGGGTGTATCAAACCTTGCGTTTTGATAACGATGGG
GTCTTTTTGCAATCAGGCAGCTCGATTGTAGCGATTGATCTTGCTAGTGGTGTGCAACAAACTCTCGTCATGACCGGAAC
ATTTCCATCGGTGTCGCCTGATGGCCGCCAATTGGCCTTCGTGCGTACCCGCGACGGCATTTACCCAACCTTATACCTCT
ACGATTTACAAACTAAGCAAGAGCGGGTGCTGTTTGATCAGCCCAACTTGGTGAGTGCCTTAGAAGCACCAATCTGGTCG
GCGGATGGCAAAACAATTTATATCGCGGCCAGCCCTTTGACAATTGGCCAACATCAACCAAACTGGGTCGATTGGTTTGT
CACGCCAGCATCTGCCCATGGTTTGGGCTGGCAAGTGTGGTCGGTTGATCTGGCGACAGGTCAAGGCAAGCCGGTCAATA
GCGAAATCTTCGAAGATCCTCGGATCGTCGTTGATGGTTCGCTGTTGTATGTTTGGACGTTCTCAGGCCTTTGGCAGATG
GATTTGGTCGGTAATCCTCCAGTTTTAATCGAAGAGCCAGGCGATATCGGCGGTATGACGCGGGTTCCCTAG

Upstream 100 bases:

>100_bases
AGCTGGTTTCGAGCGAGTTGGCTTTATTCCACGAGCCTATATTGATCCGCGCAGTAATCAAGGCACTGATATAGCGCTGT
ATCTCCGCGAGCGATAATTC

Downstream 100 bases:

>100_bases
TTAGAGCGTAGAGCTTAGAACATAGAGACGATAGGCTAGGGTTTTACGCAGAGGCGCAGAGAGAGGGATGAAGGTAACAA
ATCAGAAGGCAAAAGCCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MRFVICVLVCILLSSCGAANSATVTPPAAVAPKLGDISLIISRGGDLWRFDLPAKQWTQLTNEAPNAYSTFPSIAPDGKS
VVYSYRPPVPTPSAEQPFVVPVNHANQIAVDGGASKSLFVPDGGKRDGLQIYDSLDTPVWSPDGKTLYGVYQTLRFDNDG
VFLQSGSSIVAIDLASGVQQTLVMTGTFPSVSPDGRQLAFVRTRDGIYPTLYLYDLQTKQERVLFDQPNLVSALEAPIWS
ADGKTIYIAASPLTIGQHQPNWVDWFVTPASAHGLGWQVWSVDLATGQGKPVNSEIFEDPRIVVDGSLLYVWTFSGLWQM
DLVGNPPVLIEEPGDIGGMTRVP

Sequences:

>Translated_343_residues
MRFVICVLVCILLSSCGAANSATVTPPAAVAPKLGDISLIISRGGDLWRFDLPAKQWTQLTNEAPNAYSTFPSIAPDGKS
VVYSYRPPVPTPSAEQPFVVPVNHANQIAVDGGASKSLFVPDGGKRDGLQIYDSLDTPVWSPDGKTLYGVYQTLRFDNDG
VFLQSGSSIVAIDLASGVQQTLVMTGTFPSVSPDGRQLAFVRTRDGIYPTLYLYDLQTKQERVLFDQPNLVSALEAPIWS
ADGKTIYIAASPLTIGQHQPNWVDWFVTPASAHGLGWQVWSVDLATGQGKPVNSEIFEDPRIVVDGSLLYVWTFSGLWQM
DLVGNPPVLIEEPGDIGGMTRVP
>Mature_343_residues
MRFVICVLVCILLSSCGAANSATVTPPAAVAPKLGDISLIISRGGDLWRFDLPAKQWTQLTNEAPNAYSTFPSIAPDGKS
VVYSYRPPVPTPSAEQPFVVPVNHANQIAVDGGASKSLFVPDGGKRDGLQIYDSLDTPVWSPDGKTLYGVYQTLRFDNDG
VFLQSGSSIVAIDLASGVQQTLVMTGTFPSVSPDGRQLAFVRTRDGIYPTLYLYDLQTKQERVLFDQPNLVSALEAPIWS
ADGKTIYIAASPLTIGQHQPNWVDWFVTPASAHGLGWQVWSVDLATGQGKPVNSEIFEDPRIVVDGSLLYVWTFSGLWQM
DLVGNPPVLIEEPGDIGGMTRVP

Specific function: Unknown

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37096; Mature: 37096

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVICVLVCILLSSCGAANSATVTPPAAVAPKLGDISLIISRGGDLWRFDLPAKQWTQL
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEEEECCCCEEEEECCHHHHHHH
TNEAPNAYSTFPSIAPDGKSVVYSYRPPVPTPSAEQPFVVPVNHANQIAVDGGASKSLFV
HHCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEC
PDGGKRDGLQIYDSLDTPVWSPDGKTLYGVYQTLRFDNDGVFLQSGSSIVAIDLASGVQQ
CCCCCCCCEEEEECCCCCEECCCCCEEEEEEEEEEECCCCEEEECCCCEEEEEECCCCCE
TLVMTGTFPSVSPDGRQLAFVRTRDGIYPTLYLYDLQTKQERVLFDQPNLVSALEAPIWS
EEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEECCCCHHHHHCCCEEC
ADGKTIYIAASPLTIGQHQPNWVDWFVTPASAHGLGWQVWSVDLATGQGKPVNSEIFEDP
CCCCEEEEEECCEEECCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCHHHHCCC
RIVVDGSLLYVWTFSGLWQMDLVGNPPVLIEEPGDIGGMTRVP
EEEEECCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRFVICVLVCILLSSCGAANSATVTPPAAVAPKLGDISLIISRGGDLWRFDLPAKQWTQL
CHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEEEECCCCEEEEECCHHHHHHH
TNEAPNAYSTFPSIAPDGKSVVYSYRPPVPTPSAEQPFVVPVNHANQIAVDGGASKSLFV
HHCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCEEEC
PDGGKRDGLQIYDSLDTPVWSPDGKTLYGVYQTLRFDNDGVFLQSGSSIVAIDLASGVQQ
CCCCCCCCEEEEECCCCCEECCCCCEEEEEEEEEEECCCCEEEECCCCEEEEEECCCCCE
TLVMTGTFPSVSPDGRQLAFVRTRDGIYPTLYLYDLQTKQERVLFDQPNLVSALEAPIWS
EEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEECCCCHHHHHCCCEEC
ADGKTIYIAASPLTIGQHQPNWVDWFVTPASAHGLGWQVWSVDLATGQGKPVNSEIFEDP
CCCCEEEEEECCEEECCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCHHHHCCC
RIVVDGSLLYVWTFSGLWQMDLVGNPPVLIEEPGDIGGMTRVP
EEEEECCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA