| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is gltX
Identifier: 159897286
GI number: 159897286
Start: 859688
End: 861175
Strand: Reverse
Name: gltX
Synonym: Haur_0757
Alternate gene names: 159897286
Gene position: 861175-859688 (Counterclockwise)
Preceding gene: 159897287
Following gene: 159897285
Centisome position: 13.57
GC content: 52.08
Gene sequence:
>1488_bases ATGTCGGATCGTCCAACACCAGCCCGCACGCGCTTTGCGCCAAGTCCGACGGGCTATCTGCATATCGGTAGTTTACGTAC CGTGTTATTTAGCTGGTTGTGGGCTCGCCACACTGGCGGCCAATTTTTATTACGGATTGAAGATACCGATCGCAAGCGCT TTGTCGAAGGCGCAGAAGAGCAATTAACCAGTTCGTTGCAAGCGATCGGCCTAATGTGGGATGAAGGTCCAATTGTTGGC GGTCCTCACGCACCCTATAAACAATCCGAACGCTTGGAAATTTACCAAGCTCACGCCCAAGCCTTGATCGATAAAGGTGT GGCCTATCGTTCGTATGCTACTGCCGACGAAATTGCGGCGATCAATGCCGAACGTGAAGCTCGCGGCGAGCCAAAGCTCT TGGTGTTTCGCAATTTGCCAGGCATCGACGATGCCGCTCGTGAAGCCGCAGGCGCTGACTATAACGTGCGGCTAAGCCTC AAAACGACTGGCCAAACCGTCGTTCAGGATCTTGTGCGCGGCCAAATCGTCTTTGATAATGCTGCCTTGAAAATGCCCGA CCCAGTGTTGTTGAAAACCGATGGCTTCCCAACCTATGCCCTCGCTGCCATGGTCGATGATCACTTGATGGGGATCACCC ATGTGCTGCGGGCTGATGAGTGGATTCCAACCTGGCCAATTCATCATCAAATTTACGAGGCCTTCGGTTGGGAGCAACCA GTTTGGGTGCATGTGCCGCAAGTCTTGGGCAGCGATGGCAAGAAGCTTTCCAAACGCCACGGCGATACATCGGTCACCGA GTATATCGATTTAGGCTTTGTGCCCGAAGCCATTATCAACTATTTGGCCTTGATCGGCTGGTCATACGATGATAAAACAG AGTTTATGACCCTTGAAGAGTTGATCGAGCGCTTTGATCTGAATCGGATTCGGCCATCGGGCGGGGTGTTTGATCGCGAT AAGCTTTTGCATTTCAATGGGGTTTATCTGCGCAACATGGCTCCTGCTGAGTTGGCGCAACGGGTTGCACCCTATCTCAG CAAGGCAGGCTTGATCAGCGCCGAACCAACTGCTGCCGAATTGGCCAAAATTACCGAATATTTGCCATTGGTGCAAGATC GCCTAAAATTGCTCAGTGAAGCGCCAGAATTGCTCGATTTCTTCTTTGTAGACCCACAAGGCTACGACCCAGCCTTGCTT GTGCCAAAGAAGGGCGATCCGGCGCAAACGGTTGAGATACTGGGCCAAGTCAAAGCTAGTTTTGAGGCTGTCGAAACTTG GGATGCCCCCAGTTTAGACAAGCTCTTGCATGATTTTGTCAATCAACTTGGGCTGAAAATTCCCCAAGTGTTTATGCCTA TTCGCGTTGCCATCAGTGGGCGCACGACCTCGCCAGGCCTATTCGAAACCTTGGCGGTTTTAGGTAAAGCTGTGACGCTC GCCCGAATCAGCACTGCTGCTGCTGCGCTTTCCTCTGCCTCTGTATAG
Upstream 100 bases:
>100_bases CTACTTGTCAACGTGGCGTAGCTGTTTAACGCGAGAAGGGTTCCGCGCCAATATCACCGCCAGCAATGGCTATGGTATAA TCGCGACGCAAGGAGGTATT
Downstream 100 bases:
>100_bases TTCGATTAGTCAGGAGGATGTTCAATGACGCTTGACGAAGCCAAAACCGAATTGACCAACTTGGTCTTGGGAGTTTCGCC CGATGCCGTGTTACGCTATA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MSDRPTPARTRFAPSPTGYLHIGSLRTVLFSWLWARHTGGQFLLRIEDTDRKRFVEGAEEQLTSSLQAIGLMWDEGPIVG GPHAPYKQSERLEIYQAHAQALIDKGVAYRSYATADEIAAINAEREARGEPKLLVFRNLPGIDDAAREAAGADYNVRLSL KTTGQTVVQDLVRGQIVFDNAALKMPDPVLLKTDGFPTYALAAMVDDHLMGITHVLRADEWIPTWPIHHQIYEAFGWEQP VWVHVPQVLGSDGKKLSKRHGDTSVTEYIDLGFVPEAIINYLALIGWSYDDKTEFMTLEELIERFDLNRIRPSGGVFDRD KLLHFNGVYLRNMAPAELAQRVAPYLSKAGLISAEPTAAELAKITEYLPLVQDRLKLLSEAPELLDFFFVDPQGYDPALL VPKKGDPAQTVEILGQVKASFEAVETWDAPSLDKLLHDFVNQLGLKIPQVFMPIRVAISGRTTSPGLFETLAVLGKAVTL ARISTAAAALSSASV
Sequences:
>Translated_495_residues MSDRPTPARTRFAPSPTGYLHIGSLRTVLFSWLWARHTGGQFLLRIEDTDRKRFVEGAEEQLTSSLQAIGLMWDEGPIVG GPHAPYKQSERLEIYQAHAQALIDKGVAYRSYATADEIAAINAEREARGEPKLLVFRNLPGIDDAAREAAGADYNVRLSL KTTGQTVVQDLVRGQIVFDNAALKMPDPVLLKTDGFPTYALAAMVDDHLMGITHVLRADEWIPTWPIHHQIYEAFGWEQP VWVHVPQVLGSDGKKLSKRHGDTSVTEYIDLGFVPEAIINYLALIGWSYDDKTEFMTLEELIERFDLNRIRPSGGVFDRD KLLHFNGVYLRNMAPAELAQRVAPYLSKAGLISAEPTAAELAKITEYLPLVQDRLKLLSEAPELLDFFFVDPQGYDPALL VPKKGDPAQTVEILGQVKASFEAVETWDAPSLDKLLHDFVNQLGLKIPQVFMPIRVAISGRTTSPGLFETLAVLGKAVTL ARISTAAAALSSASV >Mature_494_residues SDRPTPARTRFAPSPTGYLHIGSLRTVLFSWLWARHTGGQFLLRIEDTDRKRFVEGAEEQLTSSLQAIGLMWDEGPIVGG PHAPYKQSERLEIYQAHAQALIDKGVAYRSYATADEIAAINAEREARGEPKLLVFRNLPGIDDAAREAAGADYNVRLSLK TTGQTVVQDLVRGQIVFDNAALKMPDPVLLKTDGFPTYALAAMVDDHLMGITHVLRADEWIPTWPIHHQIYEAFGWEQPV WVHVPQVLGSDGKKLSKRHGDTSVTEYIDLGFVPEAIINYLALIGWSYDDKTEFMTLEELIERFDLNRIRPSGGVFDRDK LLHFNGVYLRNMAPAELAQRVAPYLSKAGLISAEPTAAELAKITEYLPLVQDRLKLLSEAPELLDFFFVDPQGYDPALLV PKKGDPAQTVEILGQVKASFEAVETWDAPSLDKLLHDFVNQLGLKIPQVFMPIRVAISGRTTSPGLFETLAVLGKAVTLA RISTAAAALSSASV
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=499, Percent_Identity=31.6633266533066, Blast_Score=242, Evalue=4e-64, Organism=Escherichia coli, GI1788743, Length=486, Percent_Identity=35.8024691358025, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI226510925, Length=250, Percent_Identity=34.4, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1786895, Length=374, Percent_Identity=25.1336898395722, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71993394, Length=481, Percent_Identity=36.1746361746362, Blast_Score=268, Evalue=6e-72, Organism=Saccharomyces cerevisiae, GI6324540, Length=495, Percent_Identity=33.5353535353535, Blast_Score=257, Evalue=3e-69, Organism=Drosophila melanogaster, GI24665321, Length=510, Percent_Identity=34.9019607843137, Blast_Score=286, Evalue=2e-77,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_HERA2 (A9AXJ1)
Other databases:
- EMBL: CP000875 - RefSeq: YP_001543533.1 - ProteinModelPortal: A9AXJ1 - SMR: A9AXJ1 - GeneID: 5732641 - GenomeReviews: CP000875_GR - KEGG: hau:Haur_0757 - HOGENOM: HBG628189 - OMA: MAHIPLI - BioCyc: HAUR316274:HAUR_0757-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 54778; Mature: 54647
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 258-258
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRPTPARTRFAPSPTGYLHIGSLRTVLFSWLWARHTGGQFLLRIEDTDRKRFVEGAEE CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCHHH QLTSSLQAIGLMWDEGPIVGGPHAPYKQSERLEIYQAHAQALIDKGVAYRSYATADEIAA HHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHC INAEREARGEPKLLVFRNLPGIDDAAREAAGADYNVRLSLKTTGQTVVQDLVRGQIVFDN CCCHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCEEEECC AALKMPDPVLLKTDGFPTYALAAMVDDHLMGITHVLRADEWIPTWPIHHQIYEAFGWEQP CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC VWVHVPQVLGSDGKKLSKRHGDTSVTEYIDLGFVPEAIINYLALIGWSYDDKTEFMTLEE EEEEEHHHHCCCCHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH LIERFDLNRIRPSGGVFDRDKLLHFNGVYLRNMAPAELAQRVAPYLSKAGLISAEPTAAE HHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHH LAKITEYLPLVQDRLKLLSEAPELLDFFFVDPQGYDPALLVPKKGDPAQTVEILGQVKAS HHHHHHHHHHHHHHHHHHHHCHHHHHEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHH FEAVETWDAPSLDKLLHDFVNQLGLKIPQVFMPIRVAISGRTTSPGLFETLAVLGKAVTL HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHH ARISTAAAALSSASV HHHHHHHHHHHHCCC >Mature Secondary Structure SDRPTPARTRFAPSPTGYLHIGSLRTVLFSWLWARHTGGQFLLRIEDTDRKRFVEGAEE CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCHHH QLTSSLQAIGLMWDEGPIVGGPHAPYKQSERLEIYQAHAQALIDKGVAYRSYATADEIAA HHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHC INAEREARGEPKLLVFRNLPGIDDAAREAAGADYNVRLSLKTTGQTVVQDLVRGQIVFDN CCCHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCEEEECC AALKMPDPVLLKTDGFPTYALAAMVDDHLMGITHVLRADEWIPTWPIHHQIYEAFGWEQP CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC VWVHVPQVLGSDGKKLSKRHGDTSVTEYIDLGFVPEAIINYLALIGWSYDDKTEFMTLEE EEEEEHHHHCCCCHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH LIERFDLNRIRPSGGVFDRDKLLHFNGVYLRNMAPAELAQRVAPYLSKAGLISAEPTAAE HHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHH LAKITEYLPLVQDRLKLLSEAPELLDFFFVDPQGYDPALLVPKKGDPAQTVEILGQVKAS HHHHHHHHHHHHHHHHHHHHCHHHHHEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHH FEAVETWDAPSLDKLLHDFVNQLGLKIPQVFMPIRVAISGRTTSPGLFETLAVLGKAVTL HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHH ARISTAAAALSSASV HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA